RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 GRPEL1Q9HAV7 217 aa13.31□□□□□ -0.28
SUPT16H-207ENST00000557394 MAP3K4Q9Y6R4 1608 aa13.3□□□□□ -0.28
SUPT16H-207ENST00000557394 TBC1D32Q96NH3 1257 aa13.3□□□□□ -0.28
SUPT16H-207ENST00000557394 PLEKHH1Q9ULM0 1364 aa13.3□□□□□ -0.28
SUPT16H-207ENST00000557394 FAM43BQ6ZT52 329 aaPredicted RBP13.3□□□□□ -0.28
SUPT16H-207ENST00000557394 ZNF644Q9H582 1327 aaPredicted RBP13.3□□□□□ -0.28
SUPT16H-207ENST00000557394 CCDC144AA2RUR9 1427 aa13.3□□□□□ -0.28
SUPT16H-207ENST00000557394 CROCC2H7BZ55 1655 aa13.3□□□□□ -0.28
SUPT16H-207ENST00000557394 TRAK2O60296 914 aa13.29□□□□□ -0.28
SUPT16H-207ENST00000557394 ZNF428Q96B54 188 aa13.29□□□□□ -0.28
SUPT16H-207ENST00000557394 ARHGEF5Q12774 1597 aa13.29□□□□□ -0.28
SUPT16H-207ENST00000557394 CFAP74Q9C0B2 1584 aa13.29□□□□□ -0.28
SUPT16H-207ENST00000557394 EFCAB2Q5VUJ9 269 aa13.29□□□□□ -0.28
SUPT16H-207ENST00000557394 ZNF777Q9ULD5 760 aaPredicted RBP13.29□□□□□ -0.28
SUPT16H-207ENST00000557394 DMRT2Q9Y5R5 561 aa13.29□□□□□ -0.28
SUPT16H-207ENST00000557394 IGHDP01880 384 aa13.28□□□□□ -0.28
SUPT16H-207ENST00000557394 CD109Q6YHK3 1445 aa13.28□□□□□ -0.28
SUPT16H-207ENST00000557394 CANXP27824 592 aaKnown RBP13.28□□□□□ -0.28
SUPT16H-207ENST00000557394 TRMT2AQ8IZ69 625 aaKnown RBP13.28□□□□□ -0.28
SUPT16H-207ENST00000557394 TERF1P54274 439 aa13.27□□□□□ -0.28
SUPT16H-207ENST00000557394 GZF1Q9H116 711 aaPredicted RBP13.27□□□□□ -0.28
SUPT16H-207ENST00000557394 ABCC1P33527 1531 aa13.27□□□□□ -0.29
SUPT16H-207ENST00000557394 FANCAO15360 1455 aa13.27□□□□□ -0.29
SUPT16H-207ENST00000557394 KIF13AQ9H1H9 1805 aa13.27□□□□□ -0.29
SUPT16H-207ENST00000557394 GOLGA2Q08379 1002 aa13.26□□□□□ -0.29
SUPT16H-207ENST00000557394 PKD2Q13563 968 aa13.26□□□□□ -0.29
SUPT16H-207ENST00000557394 CHMP5Q9NZZ3 219 aa13.26□□□□□ -0.29
SUPT16H-207ENST00000557394 ADGRL2O95490 1459 aa13.26□□□□□ -0.29
SUPT16H-207ENST00000557394 ADGBQ8N7X0 1667 aa13.26□□□□□ -0.29
SUPT16H-207ENST00000557394 SYCP2Q9BX26 1530 aa13.25□□□□□ -0.29
SUPT16H-207ENST00000557394 SLFN5Q08AF3 891 aa13.25□□□□□ -0.29
SUPT16H-207ENST00000557394 GRIPAP1Q4V328 841 aa13.25□□□□□ -0.29
SUPT16H-207ENST00000557394 COL17A1Q9UMD9 1497 aaPredicted RBP13.25□□□□□ -0.29
SUPT16H-207ENST00000557394 ADAMTS8Q9UP79 889 aa13.25□□□□□ -0.29
SUPT16H-207ENST00000557394 SHANK2Q9UPX8 1470 aa13.24□□□□□ -0.29
SUPT16H-207ENST00000557394 DDX11L8A8MPP1 907 aa13.24□□□□□ -0.29
SUPT16H-207ENST00000557394 ZBTB22O15209 634 aa13.24□□□□□ -0.29
SUPT16H-207ENST00000557394 UPF2Q9HAU5 1272 aaKnown RBP13.24□□□□□ -0.29
SUPT16H-207ENST00000557394 CCDC141Q6ZP82 1450 aa13.23□□□□□ -0.29
SUPT16H-207ENST00000557394 KIAA1211Q6ZU35 1233 aa13.23□□□□□ -0.29
SUPT16H-207ENST00000557394 TRIM44Q96DX7 344 aaPredicted RBP13.23□□□□□ -0.29
SUPT16H-207ENST00000557394 MAP7D2Q96T17 732 aa13.23□□□□□ -0.29
SUPT16H-207ENST00000557394 CGNL1Q0VF96 1302 aa13.23□□□□□ -0.29
SUPT16H-207ENST00000557394 ZBTB7CA1YPR0 619 aa13.23□□□□□ -0.29
SUPT16H-207ENST00000557394 NEO1Q92859 1461 aa13.23□□□□□ -0.29
SUPT16H-207ENST00000557394 FAM69CQ0P6D2 419 aa13.22□□□□□ -0.29
SUPT16H-207ENST00000557394 NINLQ9Y2I6 1382 aa13.22□□□□□ -0.29
SUPT16H-207ENST00000557394 NKTRP30414 1462 aaKnown RBP13.22□□□□□ -0.29
SUPT16H-207ENST00000557394 TRPM1Q7Z4N2 1603 aa13.22□□□□□ -0.29
SUPT16H-207ENST00000557394 OFD1O75665 1012 aa13.22□□□□□ -0.29
SUPT16H-207ENST00000557394 CC2D1BQ5T0F9 858 aaKnown RBP13.22□□□□□ -0.29
SUPT16H-207ENST00000557394 PPP4R3CPQ6ZMV5 832 aa13.22□□□□□ -0.29
SUPT16H-207ENST00000557394 STAC3Q96MF2 364 aa13.22□□□□□ -0.29
SUPT16H-207ENST00000557394 MAST1Q9Y2H9 1570 aa13.22□□□□□ -0.29
SUPT16H-207ENST00000557394 RTEL1-TNFRSF6BF6WH68 1400 aa13.21□□□□□ -0.29
SUPT16H-207ENST00000557394 RIPK4P57078 832 aa13.21□□□□□ -0.29
SUPT16H-207ENST00000557394 PDE3AQ14432 1141 aa13.21□□□□□ -0.29
SUPT16H-207ENST00000557394 PPRC1Q5VV67 1664 aaKnown RBP13.21□□□□□ -0.3
SUPT16H-207ENST00000557394 ADGRL1O94910 1474 aa13.21□□□□□ -0.3
SUPT16H-207ENST00000557394 TRHP20396 242 aaPredicted RBP13.21□□□□□ -0.3
SUPT16H-207ENST00000557394 HNRNPMP52272 730 aaKnown RBP eCLIP13.21□□□□□ -0.3
SUPT16H-207ENST00000557394 LAMC1P11047 1609 aa13.21□□□□□ -0.3
SUPT16H-207ENST00000557394 GPRASP1Q5JY77 1395 aa13.2□□□□□ -0.3
SUPT16H-207ENST00000557394 KDM5DQ9BY66 1539 aa13.2□□□□□ -0.3
SUPT16H-207ENST00000557394 SCAPERQ9BY12 1400 aa13.2□□□□□ -0.3
SUPT16H-207ENST00000557394 PTMSP20962 102 aa13.19□□□□□ -0.3
SUPT16H-207ENST00000557394 CLUAP1Q96AJ1 413 aa13.19□□□□□ -0.3
SUPT16H-207ENST00000557394 PPP1R9BQ96SB3 815 aa13.19□□□□□ -0.3
SUPT16H-207ENST00000557394 TSPOAP1O95153 1857 aa13.19□□□□□ -0.3
SUPT16H-207ENST00000557394 C9orf84Q5VXU9 1444 aa13.19□□□□□ -0.3
SUPT16H-207ENST00000557394 NCOA3Q9Y6Q9 1424 aa13.19□□□□□ -0.3
SUPT16H-207ENST00000557394 ANKRD30AQ9BXX3 1397 aa13.19□□□□□ -0.3
SUPT16H-207ENST00000557394 DDIT3P35638 169 aa13.18□□□□□ -0.3
SUPT16H-207ENST00000557394 GAS2L3Q86XJ1 694 aa13.18□□□□□ -0.3
SUPT16H-207ENST00000557394 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.18□□□□□ -0.3
SUPT16H-207ENST00000557394 SMAP1Q8IYB5 467 aaPredicted RBP13.18□□□□□ -0.3
SUPT16H-207ENST00000557394 PRAG1Q86YV5 1406 aa13.17□□□□□ -0.3
SUPT16H-207ENST00000557394 BCAR3O75815 825 aa13.17□□□□□ -0.3
SUPT16H-207ENST00000557394 TSPY4P0CV99 314 aa13.17□□□□□ -0.3
SUPT16H-207ENST00000557394 TSPY10P0CW01 314 aa13.17□□□□□ -0.3
SUPT16H-207ENST00000557394 CCDC173Q0VFZ6 552 aa13.17□□□□□ -0.3
SUPT16H-207ENST00000557394 ZSCAN30Q86W11 494 aa13.17□□□□□ -0.3
SUPT16H-207ENST00000557394 PANK3Q9H999 370 aa13.17□□□□□ -0.3
SUPT16H-207ENST00000557394 TRAPPC8Q9Y2L5 1435 aa13.17□□□□□ -0.3
SUPT16H-207ENST00000557394 PLXNC1O60486 1568 aa13.17□□□□□ -0.3
SUPT16H-207ENST00000557394 TESK2Q96S53 571 aa13.17□□□□□ -0.3
SUPT16H-207ENST00000557394 DISP3Q9P2K9 1392 aa13.17□□□□□ -0.3
SUPT16H-207ENST00000557394 PRDM15P57071 1507 aaPredicted RBP13.16□□□□□ -0.3
SUPT16H-207ENST00000557394 PTMAP06454 111 aaKnown RBP13.16□□□□□ -0.3
SUPT16H-207ENST00000557394 FAM193AP78312 1265 aa13.16□□□□□ -0.3
SUPT16H-207ENST00000557394 WDR43Q15061 677 aaKnown RBP eCLIP13.16□□□□□ -0.3
SUPT16H-207ENST00000557394 CC2D2BQ6DHV5 1058 aa13.16□□□□□ -0.3
SUPT16H-207ENST00000557394 PATL2C9JE40 543 aaKnown RBP13.15□□□□□ -0.3
SUPT16H-207ENST00000557394 PPP2R1AP30153 589 aa13.14□□□□□ -0.31
SUPT16H-207ENST00000557394 PMFBP1Q8TBY8 1022 aa13.14□□□□□ -0.31
SUPT16H-207ENST00000557394 SPINK5Q9NQ38 1064 aaPredicted RBP13.14□□□□□ -0.31
SUPT16H-207ENST00000557394 INO80Q9ULG1 1556 aaPredicted RBP13.14□□□□□ -0.31
SUPT16H-207ENST00000557394 ANKRD50Q9ULJ7 1429 aa13.14□□□□□ -0.31
SUPT16H-207ENST00000557394 ZNF518AQ6AHZ1 1483 aa13.14□□□□□ -0.31
SUPT16H-207ENST00000557394 POGZQ7Z3K3 1410 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms