RNA–Protein interactions for RNA: ENST00000557273.5

RDH11-209, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 562 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-209ENST00000557273 SLC4A1APQ9BWU0 796 aaKnown RBP15.27■□□□□ 0.04
RDH11-209ENST00000557273 MYOM2P54296 1465 aa15.27■□□□□ 0.03
RDH11-209ENST00000557273 FNBP4Q8N3X1 1017 aaPredicted RBP15.26■□□□□ 0.03
RDH11-209ENST00000557273 PXDNQ92626 1479 aa15.26■□□□□ 0.03
RDH11-209ENST00000557273 NGLY1Q96IV0 654 aa15.25■□□□□ 0.03
RDH11-209ENST00000557273 SPATA31E1Q6ZUB1 1445 aa15.25■□□□□ 0.03
RDH11-209ENST00000557273 NPHP3Q7Z494 1330 aa15.24■□□□□ 0.03
RDH11-209ENST00000557273 ATRNO75882 1429 aa15.24■□□□□ 0.03
RDH11-209ENST00000557273 ADAMTS2O95450 1211 aa15.23■□□□□ 0.03
RDH11-209ENST00000557273 TRPC5Q9UL62 973 aaPredicted RBP15.23■□□□□ 0.03
RDH11-209ENST00000557273 CCDC144AA2RUR9 1427 aa15.23■□□□□ 0.03
RDH11-209ENST00000557273 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.23■□□□□ 0.03
RDH11-209ENST00000557273 ANKRD30BQ9BXX2 1392 aa15.23■□□□□ 0.03
RDH11-209ENST00000557273 USP21Q9UK80 565 aa15.22■□□□□ 0.03
RDH11-209ENST00000557273 LRPPRCP42704 1394 aaKnown RBP15.22■□□□□ 0.03
RDH11-209ENST00000557273 ATAD2Q6PL18 1390 aa15.22■□□□□ 0.03
RDH11-209ENST00000557273 ABCC11Q96J66 1382 aa15.22■□□□□ 0.03
RDH11-209ENST00000557273 KIF1AQ12756 1690 aa15.22■□□□□ 0.03
RDH11-209ENST00000557273 ADGRF5Q8IZF2 1346 aa15.21■□□□□ 0.03
RDH11-209ENST00000557273 FMN2Q9NZ56 1722 aa15.21■□□□□ 0.03
RDH11-209ENST00000557273 PIK3C2GO75747 1445 aa15.21■□□□□ 0.03
RDH11-209ENST00000557273 BCL9LQ86UU0 1499 aa15.2■□□□□ 0.02
RDH11-209ENST00000557273 ESCO1Q5FWF5 840 aa15.19■□□□□ 0.02
RDH11-209ENST00000557273 SIRT1Q96EB6 747 aa15.16■□□□□ 0.02
RDH11-209ENST00000557273 YTHDC2Q9H6S0 1430 aaKnown RBP15.16■□□□□ 0.02
RDH11-209ENST00000557273 NRXN1Q9ULB1 1477 aa15.15■□□□□ 0.02
RDH11-209ENST00000557273 EP400Q96L91 3159 aa15.15■□□□□ 0.02
RDH11-209ENST00000557273 FOXO3O43524 673 aa15.15■□□□□ 0.02
RDH11-209ENST00000557273 FOXD1Q16676 465 aa15.15■□□□□ 0.02
RDH11-209ENST00000557273 WAPLQ7Z5K2 1190 aa15.15■□□□□ 0.02
RDH11-209ENST00000557273 SLIT2O94813 1529 aa15.15■□□□□ 0.02
RDH11-209ENST00000557273 ACIN1Q9UKV3 1341 aaKnown RBP15.15■□□□□ 0.02
RDH11-209ENST00000557273 USP32Q8NFA0 1604 aa15.14■□□□□ 0.01
RDH11-209ENST00000557273 PLEKHH1Q9ULM0 1364 aa15.14■□□□□ 0.01
RDH11-209ENST00000557273 MPHOSPH9Q99550 1183 aa15.14■□□□□ 0.01
RDH11-209ENST00000557273 SPATA31A3Q5VYP0 1347 aa15.14■□□□□ 0.01
RDH11-209ENST00000557273 RGPD8O14715 1765 aaPredicted RBP15.13■□□□□ 0.01
RDH11-209ENST00000557273 RGL3Q3MIN7 710 aa15.12■□□□□ 0.01
RDH11-209ENST00000557273 CCDC125Q86Z20 511 aa15.12■□□□□ 0.01
RDH11-209ENST00000557273 GJD4Q96KN9 370 aaPredicted RBP15.12■□□□□ 0.01
RDH11-209ENST00000557273 STK26Q9P289 416 aa15.12■□□□□ 0.01
RDH11-209ENST00000557273 GLI3P10071 1580 aa15.11■□□□□ 0.01
RDH11-209ENST00000557273 XPCQ01831 940 aaPredicted RBP15.11■□□□□ 0.01
RDH11-209ENST00000557273 TMEM132EQ6IEE7 984 aa15.11■□□□□ 0.01
RDH11-209ENST00000557273 C14orf93Q9H972 538 aaKnown RBP15.11■□□□□ 0.01
RDH11-209ENST00000557273 NWD2Q9ULI1 1742 aa15.11■□□□□ 0.01
RDH11-209ENST00000557273 ABCA3Q99758 1704 aa15.1■□□□□ 0.01
RDH11-209ENST00000557273 TNS3Q68CZ2 1445 aa15.09■□□□□ 0.01
RDH11-209ENST00000557273 RALGAPBQ86X10 1494 aa15.09■□□□□ 0.01
RDH11-209ENST00000557273 DLC1Q96QB1 1528 aa15.09■□□□□ 0.01
RDH11-209ENST00000557273 UNC5CLQ8IV45 518 aa15.09■□□□□ 0.01
RDH11-209ENST00000557273 ADGRB2O60241 1585 aa15.09■□□□□ 0.01
RDH11-209ENST00000557273 SRCAPQ6ZRS2 3230 aa15.09■□□□□ 0.01
RDH11-209ENST00000557273 BRWD3Q6RI45 1802 aa15.08■□□□□ 0.01
RDH11-209ENST00000557273 NUTM2FA1L443 756 aa15.08■□□□□ 0
RDH11-209ENST00000557273 PLCH1Q4KWH8 1693 aa15.08■□□□□ 0
RDH11-209ENST00000557273 SBNO1A3KN83 1393 aa15.08■□□□□ 0
RDH11-209ENST00000557273 DHX57Q6P158 1386 aaKnown RBP15.07■□□□□ 0
RDH11-209ENST00000557273 ANKARQ7Z5J8 1434 aa15.07■□□□□ 0
RDH11-209ENST00000557273 KRT28Q7Z3Y7 464 aa15.06■□□□□ 0
RDH11-209ENST00000557273 ZRANB1Q9UGI0 708 aa15.05■□□□□ -0
RDH11-209ENST00000557273 PHF8Q9UPP1 1060 aa15.05■□□□□ -0
RDH11-209ENST00000557273 BLMP54132 1417 aaPredicted RBP15.05■□□□□ -0
RDH11-209ENST00000557273 ADGRB1O14514 1584 aa15.05■□□□□ -0
RDH11-209ENST00000557273 ARHGEF10O15013 1369 aa15.04■□□□□ -0
RDH11-209ENST00000557273 PSME1Q06323 249 aa15.04■□□□□ -0
RDH11-209ENST00000557273 TRPM3Q9HCF6 1732 aaPredicted RBP15.03■□□□□ -0
RDH11-209ENST00000557273 CFAP70Q5T0N1 1121 aa15.03■□□□□ -0
RDH11-209ENST00000557273 ONECUT3O60422 494 aaPredicted RBP15.02■□□□□ -0
RDH11-209ENST00000557273 VPS72Q15906 364 aa15.02■□□□□ -0
RDH11-209ENST00000557273 NRAPQ86VF7 1730 aa15.02□□□□□ -0.01
RDH11-209ENST00000557273 ALS2Q96Q42 1657 aa15.02□□□□□ -0.01
RDH11-209ENST00000557273 PRAM1Q96QH2 718 aa15.01□□□□□ -0.01
RDH11-209ENST00000557273 EIF3AQ14152 1382 aaKnown RBP14.99□□□□□ -0.01
RDH11-209ENST00000557273 TULP4Q9NRJ4 1543 aa14.98□□□□□ -0.01
RDH11-209ENST00000557273 CRYBG1Q9Y4K1 1723 aa14.98□□□□□ -0.01
RDH11-209ENST00000557273 SEPT12Q8IYM1 358 aa14.98□□□□□ -0.01
RDH11-209ENST00000557273 COL14A1Q05707 1796 aaKnown RBP14.98□□□□□ -0.01
RDH11-209ENST00000557273 HAP1P54257 671 aaPredicted RBP14.97□□□□□ -0.01
RDH11-209ENST00000557273 CABLES1Q8TDN4 633 aa14.97□□□□□ -0.01
RDH11-209ENST00000557273 STAC3Q96MF2 364 aa14.96□□□□□ -0.01
RDH11-209ENST00000557273 POGKQ9P215 609 aa14.96□□□□□ -0.01
RDH11-209ENST00000557273 RAB3GAP2Q9H2M9 1393 aa14.96□□□□□ -0.02
RDH11-209ENST00000557273 ITSN1Q15811 1721 aa14.95□□□□□ -0.02
RDH11-209ENST00000557273 FAM83GA6ND36 823 aa14.95□□□□□ -0.02
RDH11-209ENST00000557273 SAFB2Q14151 953 aaKnown RBP eCLIP14.95□□□□□ -0.02
RDH11-209ENST00000557273 LRP5O75197 1615 aa14.95□□□□□ -0.02
RDH11-209ENST00000557273 GPRASP1Q5JY77 1395 aa14.94□□□□□ -0.02
RDH11-209ENST00000557273 ARHGEF28Q8N1W1 1705 aaKnown RBP14.94□□□□□ -0.02
RDH11-209ENST00000557273 PRR36Q9H6K5 1346 aa14.93□□□□□ -0.02
RDH11-209ENST00000557273 SF3B2Q13435 895 aaKnown RBP14.93□□□□□ -0.02
RDH11-209ENST00000557273 KRT27Q7Z3Y8 459 aa14.93□□□□□ -0.02
RDH11-209ENST00000557273 PMFBP1Q8TBY8 1022 aa14.93□□□□□ -0.02
RDH11-209ENST00000557273 LMOD2Q6P5Q4 547 aa14.92□□□□□ -0.02
RDH11-209ENST00000557273 DEFB132Q7Z7B7 95 aa14.92□□□□□ -0.02
RDH11-209ENST00000557273 THSD7AQ9UPZ6 1657 aa14.92□□□□□ -0.02
RDH11-209ENST00000557273 RGPD1P0DJD0 1748 aa14.92□□□□□ -0.02
RDH11-209ENST00000557273 WASLO00401 505 aaPredicted RBP14.91□□□□□ -0.02
RDH11-209ENST00000557273 TRAK1Q9UPV9 953 aa14.91□□□□□ -0.02
RDH11-209ENST00000557273 ATP7BP35670 1465 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms