RNA–Protein interactions for RNA: ENST00000557253.1

RIPK3-205, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 657 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-205ENST00000557253 ESCO1Q5FWF5 840 aa14.71□□□□□ -0.05
RIPK3-205ENST00000557253 MARF1Q9Y4F3 1742 aaKnown RBP14.7□□□□□ -0.06
RIPK3-205ENST00000557253 PPARGC1BQ86YN6 1023 aaKnown RBP14.7□□□□□ -0.06
RIPK3-205ENST00000557253 CCDC125Q86Z20 511 aa14.7□□□□□ -0.06
RIPK3-205ENST00000557253 GJD4Q96KN9 370 aaPredicted RBP14.7□□□□□ -0.06
RIPK3-205ENST00000557253 MYOM2P54296 1465 aa14.69□□□□□ -0.06
RIPK3-205ENST00000557253 NUTM2FA1L443 756 aa14.68□□□□□ -0.06
RIPK3-205ENST00000557253 VGFO15240 615 aaPredicted RBP14.68□□□□□ -0.06
RIPK3-205ENST00000557253 FOXO3O43524 673 aa14.68□□□□□ -0.06
RIPK3-205ENST00000557253 NPHP3Q7Z494 1330 aa14.67□□□□□ -0.06
RIPK3-205ENST00000557253 PXDNQ92626 1479 aa14.67□□□□□ -0.06
RIPK3-205ENST00000557253 HFM1A2PYH4 1435 aa14.66□□□□□ -0.06
RIPK3-205ENST00000557253 DEFB132Q7Z7B7 95 aa14.66□□□□□ -0.06
RIPK3-205ENST00000557253 GLI3P10071 1580 aa14.64□□□□□ -0.07
RIPK3-205ENST00000557253 RALGAPBQ86X10 1494 aa14.64□□□□□ -0.07
RIPK3-205ENST00000557253 UNC5CLQ8IV45 518 aa14.64□□□□□ -0.07
RIPK3-205ENST00000557253 BLMP54132 1417 aaPredicted RBP14.64□□□□□ -0.07
RIPK3-205ENST00000557253 PLEKHG5O94827 1062 aa14.63□□□□□ -0.07
RIPK3-205ENST00000557253 BRWD3Q6RI45 1802 aa14.63□□□□□ -0.07
RIPK3-205ENST00000557253 CDC42BPGQ6DT37 1551 aa14.63□□□□□ -0.07
RIPK3-205ENST00000557253 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.63□□□□□ -0.07
RIPK3-205ENST00000557253 NAIPQ13075 1403 aa14.62□□□□□ -0.07
RIPK3-205ENST00000557253 WAPLQ7Z5K2 1190 aa14.62□□□□□ -0.07
RIPK3-205ENST00000557253 PRAG1Q86YV5 1406 aa14.62□□□□□ -0.07
RIPK3-205ENST00000557253 STK26Q9P289 416 aa14.62□□□□□ -0.07
RIPK3-205ENST00000557253 PPLO60437 1756 aa14.62□□□□□ -0.07
RIPK3-205ENST00000557253 SF3B2Q13435 895 aaKnown RBP14.61□□□□□ -0.07
RIPK3-205ENST00000557253 RPGRIP1LQ68CZ1 1315 aa14.61□□□□□ -0.07
RIPK3-205ENST00000557253 SLIT2O94813 1529 aa14.61□□□□□ -0.07
RIPK3-205ENST00000557253 LRPPRCP42704 1394 aaKnown RBP14.6□□□□□ -0.07
RIPK3-205ENST00000557253 SEPT12Q8IYM1 358 aa14.6□□□□□ -0.07
RIPK3-205ENST00000557253 CCDC9Q9Y3X0 531 aaKnown RBP14.58□□□□□ -0.08
RIPK3-205ENST00000557253 SPATA31A3Q5VYP0 1347 aa14.58□□□□□ -0.08
RIPK3-205ENST00000557253 USP32Q8NFA0 1604 aa14.58□□□□□ -0.08
RIPK3-205ENST00000557253 PLEKHH1Q9ULM0 1364 aa14.58□□□□□ -0.08
RIPK3-205ENST00000557253 PSDA5PKW4 1024 aaPredicted RBP14.57□□□□□ -0.08
RIPK3-205ENST00000557253 HAP1P54257 671 aaPredicted RBP14.57□□□□□ -0.08
RIPK3-205ENST00000557253 KRT28Q7Z3Y7 464 aa14.57□□□□□ -0.08
RIPK3-205ENST00000557253 CABLES1Q8TDN4 633 aa14.57□□□□□ -0.08
RIPK3-205ENST00000557253 ADGRF5Q8IZF2 1346 aa14.57□□□□□ -0.08
RIPK3-205ENST00000557253 TMEM132EQ6IEE7 984 aa14.56□□□□□ -0.08
RIPK3-205ENST00000557253 FMN2Q9NZ56 1722 aa14.55□□□□□ -0.08
RIPK3-205ENST00000557253 RGL3Q3MIN7 710 aa14.55□□□□□ -0.08
RIPK3-205ENST00000557253 KRT27Q7Z3Y8 459 aa14.55□□□□□ -0.08
RIPK3-205ENST00000557253 SLC4A1APQ9BWU0 796 aaKnown RBP14.55□□□□□ -0.08
RIPK3-205ENST00000557253 LRP5O75197 1615 aa14.55□□□□□ -0.08
RIPK3-205ENST00000557253 VPS72Q15906 364 aa14.54□□□□□ -0.08
RIPK3-205ENST00000557253 LMOD2Q6P5Q4 547 aa14.54□□□□□ -0.08
RIPK3-205ENST00000557253 PLCH1Q4KWH8 1693 aa14.54□□□□□ -0.08
RIPK3-205ENST00000557253 KIF1AQ12756 1690 aa14.53□□□□□ -0.08
RIPK3-205ENST00000557253 CCDC144AA2RUR9 1427 aa14.53□□□□□ -0.08
RIPK3-205ENST00000557253 A0A0G2JS52 829 aa14.53□□□□□ -0.08
RIPK3-205ENST00000557253 MYT1Q01538 1121 aa14.53□□□□□ -0.08
RIPK3-205ENST00000557253 RGPD8O14715 1765 aaPredicted RBP14.52□□□□□ -0.08
RIPK3-205ENST00000557253 TECPR2O15040 1411 aa14.52□□□□□ -0.08
RIPK3-205ENST00000557253 RRBP1Q9P2E9 1410 aaKnown RBP14.52□□□□□ -0.08
RIPK3-205ENST00000557253 TNS3Q68CZ2 1445 aa14.51□□□□□ -0.09
RIPK3-205ENST00000557253 ONECUT3O60422 494 aaPredicted RBP14.51□□□□□ -0.09
RIPK3-205ENST00000557253 HRCP23327 699 aa14.51□□□□□ -0.09
RIPK3-205ENST00000557253 PHF8Q9UPP1 1060 aa14.51□□□□□ -0.09
RIPK3-205ENST00000557253 ABCC11Q96J66 1382 aa14.5□□□□□ -0.09
RIPK3-205ENST00000557253 KNDC1Q76NI1 1749 aa14.5□□□□□ -0.09
RIPK3-205ENST00000557253 BAG6P46379 1132 aa14.5□□□□□ -0.09
RIPK3-205ENST00000557253 PSME1Q06323 249 aa14.5□□□□□ -0.09
RIPK3-205ENST00000557253 ABCA3Q99758 1704 aa14.49□□□□□ -0.09
RIPK3-205ENST00000557253 IFT172Q9UG01 1749 aa14.49□□□□□ -0.09
RIPK3-205ENST00000557253 NWD2Q9ULI1 1742 aa14.49□□□□□ -0.09
RIPK3-205ENST00000557253 FAM83GA6ND36 823 aa14.49□□□□□ -0.09
RIPK3-205ENST00000557253 FAM98CQ17RN3 349 aaKnown RBP14.49□□□□□ -0.09
RIPK3-205ENST00000557253 FAM182BQ5T319 152 aa14.49□□□□□ -0.09
RIPK3-205ENST00000557253 EN1Q05925 392 aaPredicted RBP14.48□□□□□ -0.09
RIPK3-205ENST00000557253 YTHDC2Q9H6S0 1430 aaKnown RBP14.48□□□□□ -0.09
RIPK3-205ENST00000557253 SAFB2Q14151 953 aaKnown RBP eCLIP14.47□□□□□ -0.09
RIPK3-205ENST00000557253 PMFBP1Q8TBY8 1022 aa14.46□□□□□ -0.09
RIPK3-205ENST00000557253 BTG4Q9NY30 223 aa14.46□□□□□ -0.09
RIPK3-205ENST00000557253 NRAPQ86VF7 1730 aa14.46□□□□□ -0.1
RIPK3-205ENST00000557253 PIK3C2GO75747 1445 aa14.45□□□□□ -0.1
RIPK3-205ENST00000557253 R3HDM1Q15032 1099 aaKnown RBP14.45□□□□□ -0.1
RIPK3-205ENST00000557253 SPATA31E1Q6ZUB1 1445 aa14.45□□□□□ -0.1
RIPK3-205ENST00000557253 SBNO1A3KN83 1393 aa14.45□□□□□ -0.1
RIPK3-205ENST00000557253 ANKRD30BQ9BXX2 1392 aa14.45□□□□□ -0.1
RIPK3-205ENST00000557253 NRXN1Q9ULB1 1477 aa14.44□□□□□ -0.1
RIPK3-205ENST00000557253 ARHGEF10O15013 1369 aa14.44□□□□□ -0.1
RIPK3-205ENST00000557253 RGPD1P0DJD0 1748 aa14.43□□□□□ -0.1
RIPK3-205ENST00000557253 SIRT1Q96EB6 747 aa14.42□□□□□ -0.1
RIPK3-205ENST00000557253 PRAM1Q96QH2 718 aa14.42□□□□□ -0.1
RIPK3-205ENST00000557253 EZH2Q15910 746 aaKnown RBP14.41□□□□□ -0.1
RIPK3-205ENST00000557253 CFAP70Q5T0N1 1121 aa14.41□□□□□ -0.1
RIPK3-205ENST00000557253 C14orf93Q9H972 538 aaKnown RBP14.4□□□□□ -0.1
RIPK3-205ENST00000557253 COL14A1Q05707 1796 aaKnown RBP14.39□□□□□ -0.11
RIPK3-205ENST00000557253 DHX57Q6P158 1386 aaKnown RBP14.39□□□□□ -0.11
RIPK3-205ENST00000557253 TNS1Q9HBL0 1735 aaKnown RBP14.39□□□□□ -0.11
RIPK3-205ENST00000557253 TRPM3Q9HCF6 1732 aaPredicted RBP14.39□□□□□ -0.11
RIPK3-205ENST00000557253 MPHOSPH9Q99550 1183 aa14.38□□□□□ -0.11
RIPK3-205ENST00000557253 HIRIP3Q9BW71 556 aaPredicted RBP14.38□□□□□ -0.11
RIPK3-205ENST00000557253 POGKQ9P215 609 aa14.38□□□□□ -0.11
RIPK3-205ENST00000557253 SPATA31A5Q5VU36 1347 aa14.38□□□□□ -0.11
RIPK3-205ENST00000557253 SPATA31A7Q8IWB4 1347 aa14.38□□□□□ -0.11
RIPK3-205ENST00000557253 ALS2Q96Q42 1657 aa14.36□□□□□ -0.11
RIPK3-205ENST00000557253 THSD7AQ9UPZ6 1657 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms