RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 PMFBP1Q8TBY8 1022 aa14.58□□□□□ -0.08
SRP54-213ENST00000556994 KIAA1210Q9ULL0 1709 aa14.58□□□□□ -0.08
SRP54-213ENST00000556994 PRKCSHP14314 528 aaPredicted RBP14.58□□□□□ -0.08
SRP54-213ENST00000556994 NINLQ9Y2I6 1382 aa14.57□□□□□ -0.08
SRP54-213ENST00000556994 DEPDC5O75140 1603 aa14.57□□□□□ -0.08
SRP54-213ENST00000556994 NLRP1Q9C000 1473 aa14.57□□□□□ -0.08
SRP54-213ENST00000556994 SHPRHQ149N8 1683 aa14.55□□□□□ -0.08
SRP54-213ENST00000556994 UPF2Q9HAU5 1272 aaKnown RBP14.55□□□□□ -0.08
SRP54-213ENST00000556994 NOS1P29475 1434 aa14.55□□□□□ -0.08
SRP54-213ENST00000556994 ATP7AQ04656 1500 aa14.55□□□□□ -0.08
SRP54-213ENST00000556994 MYOM2P54296 1465 aa14.54□□□□□ -0.08
SRP54-213ENST00000556994 WDR63Q8IWG1 891 aa14.54□□□□□ -0.08
SRP54-213ENST00000556994 TBC1D32Q96NH3 1257 aa14.54□□□□□ -0.08
SRP54-213ENST00000556994 ARXQ96QS3 562 aa14.54□□□□□ -0.08
SRP54-213ENST00000556994 TBC1D2Q9BYX2 928 aa14.54□□□□□ -0.08
SRP54-213ENST00000556994 PHF23Q9BUL5 403 aaPredicted RBP14.54□□□□□ -0.08
SRP54-213ENST00000556994 ANTXR1Q9H6X2 564 aa14.54□□□□□ -0.08
SRP54-213ENST00000556994 VWDEQ8N2E2 1590 aa14.53□□□□□ -0.08
SRP54-213ENST00000556994 KIF1BO60333 1816 aa14.53□□□□□ -0.08
SRP54-213ENST00000556994 U2AF1L5P0DN76 240 aaPredicted RBP14.53□□□□□ -0.08
SRP54-213ENST00000556994 U2AF1Q01081 240 aaKnown RBP eCLIP14.53□□□□□ -0.082e-23■■■■■ 60.6
SRP54-213ENST00000556994 NUTM2DQ5VT03 806 aaPredicted RBP14.53□□□□□ -0.08
SRP54-213ENST00000556994 RWDD1Q9H446 243 aaPredicted RBP14.53□□□□□ -0.08
SRP54-213ENST00000556994 SENP3Q9H4L4 574 aaPredicted RBP14.53□□□□□ -0.08
SRP54-213ENST00000556994 MROH2AA6NES4 1674 aa14.53□□□□□ -0.08
SRP54-213ENST00000556994 TSR2Q969E8 191 aaKnown RBP14.52□□□□□ -0.08
SRP54-213ENST00000556994 UHRF1BP1LA0JNW5 1464 aa14.52□□□□□ -0.09
SRP54-213ENST00000556994 FANCAO15360 1455 aa14.52□□□□□ -0.09
SRP54-213ENST00000556994 CFAP65Q6ZU64 1925 aaKnown RBP14.52□□□□□ -0.09
SRP54-213ENST00000556994 EIF5BO60841 1220 aaKnown RBP14.52□□□□□ -0.09
SRP54-213ENST00000556994 IQSEC2Q5JU85 1478 aa14.51□□□□□ -0.09
SRP54-213ENST00000556994 CFAP53Q96M91 514 aa14.5□□□□□ -0.09
SRP54-213ENST00000556994 MVPQ14764 893 aaKnown RBP14.5□□□□□ -0.09
SRP54-213ENST00000556994 FTSJ3Q8IY81 847 aaKnown RBP14.5□□□□□ -0.09
SRP54-213ENST00000556994 SBNO2Q9Y2G9 1366 aa14.5□□□□□ -0.09
SRP54-213ENST00000556994 MROH1Q8NDA8 1641 aa14.5□□□□□ -0.09
SRP54-213ENST00000556994 MYH16Q9H6N6 1097 aa14.49□□□□□ -0.09
SRP54-213ENST00000556994 INO80Q9ULG1 1556 aaPredicted RBP14.49□□□□□ -0.09
SRP54-213ENST00000556994 SAFB2Q14151 953 aaKnown RBP eCLIP14.49□□□□□ -0.09
SRP54-213ENST00000556994 C14orf93Q9H972 538 aaKnown RBP14.49□□□□□ -0.09
SRP54-213ENST00000556994 MFAP1P55081 439 aaKnown RBP14.48□□□□□ -0.09
SRP54-213ENST00000556994 CCDC27Q2M243 656 aa14.48□□□□□ -0.09
SRP54-213ENST00000556994 ZKSCAN2Q63HK3 967 aa14.48□□□□□ -0.09
SRP54-213ENST00000556994 DZIP1LQ8IYY4 767 aaKnown RBP14.48□□□□□ -0.09
SRP54-213ENST00000556994 IFT172Q9UG01 1749 aa14.48□□□□□ -0.09
SRP54-213ENST00000556994 ADGRL1O94910 1474 aa14.48□□□□□ -0.09
SRP54-213ENST00000556994 ZNF518AQ6AHZ1 1483 aa14.48□□□□□ -0.09
SRP54-213ENST00000556994 AAMPQ13685 434 aa14.48□□□□□ -0.09
SRP54-213ENST00000556994 FAM43AQ8N2R8 423 aa14.48□□□□□ -0.09
SRP54-213ENST00000556994 NRXN1Q9ULB1 1477 aa14.48□□□□□ -0.09
SRP54-213ENST00000556994 MYO3AQ8NEV4 1616 aa14.47□□□□□ -0.09
SRP54-213ENST00000556994 EXOSC9Q06265 439 aaKnown RBP14.47□□□□□ -0.09
SRP54-213ENST00000556994 GGT6Q6P531 493 aa14.47□□□□□ -0.09
SRP54-213ENST00000556994 GZF1Q9H116 711 aaPredicted RBP14.47□□□□□ -0.09
SRP54-213ENST00000556994 NEURL4Q96JN8 1562 aa14.47□□□□□ -0.09
SRP54-213ENST00000556994 U2SURPO15042 1029 aaKnown RBP14.47□□□□□ -0.09
SRP54-213ENST00000556994 CABP2Q9NPB3 220 aa14.47□□□□□ -0.09
SRP54-213ENST00000556994 SMC4Q9NTJ3 1288 aa14.47□□□□□ -0.09
SRP54-213ENST00000556994 EFCAB6Q5THR3 1501 aa14.47□□□□□ -0.09
SRP54-213ENST00000556994 PPRC1Q5VV67 1664 aaKnown RBP14.46□□□□□ -0.09
SRP54-213ENST00000556994 QRICH2Q9H0J4 1663 aa14.46□□□□□ -0.1
SRP54-213ENST00000556994 C22orf23Q9BZE7 217 aa14.46□□□□□ -0.1
SRP54-213ENST00000556994 ARAP3Q8WWN8 1544 aa14.45□□□□□ -0.1
SRP54-213ENST00000556994 TRIM27P14373 513 aa14.45□□□□□ -0.1
SRP54-213ENST00000556994 ITPRIPQ8IWB1 547 aa14.45□□□□□ -0.1
SRP54-213ENST00000556994 SSH1Q8WYL5 1049 aa14.44□□□□□ -0.1
SRP54-213ENST00000556994 GGNBP2Q9H3C7 697 aa14.43□□□□□ -0.1
SRP54-213ENST00000556994 RRAGDQ9NQL2 400 aaPredicted RBP14.43□□□□□ -0.1
SRP54-213ENST00000556994 ABCA9Q8IUA7 1624 aa14.43□□□□□ -0.1
SRP54-213ENST00000556994 MCM4P33991 863 aa14.42□□□□□ -0.1
SRP54-213ENST00000556994 NOB1Q9ULX3 412 aaKnown RBP14.42□□□□□ -0.1
SRP54-213ENST00000556994 ADGRB3O60242 1522 aa14.42□□□□□ -0.1
SRP54-213ENST00000556994 ADGRB1O14514 1584 aa14.42□□□□□ -0.1
SRP54-213ENST00000556994 SETBP1Q9Y6X0 1596 aa14.42□□□□□ -0.1
SRP54-213ENST00000556994 L1TD1Q5T7N2 865 aaKnown RBP14.42□□□□□ -0.1
SRP54-213ENST00000556994 TRIM35Q9UPQ4 493 aa14.42□□□□□ -0.1
SRP54-213ENST00000556994 EVC2Q86UK5 1308 aa14.42□□□□□ -0.1
SRP54-213ENST00000556994 ZC3H13Q5T200 1668 aaKnown RBP14.41□□□□□ -0.1
SRP54-213ENST00000556994 TMPOP42166 694 aaKnown RBP14.41□□□□□ -0.1
SRP54-213ENST00000556994 ZMYM3Q14202 1370 aa14.41□□□□□ -0.1
SRP54-213ENST00000556994 XRCC6P12956 609 aaKnown RBP eCLIP14.41□□□□□ -0.1
SRP54-213ENST00000556994 STK26Q9P289 416 aa14.41□□□□□ -0.1
SRP54-213ENST00000556994 NPATQ14207 1427 aa14.41□□□□□ -0.1
SRP54-213ENST00000556994 CD109Q6YHK3 1445 aa14.4□□□□□ -0.1
SRP54-213ENST00000556994 ATF7IPQ6VMQ6 1270 aa14.4□□□□□ -0.1
SRP54-213ENST00000556994 TMEM57Q8N5G2 664 aa14.4□□□□□ -0.1
SRP54-213ENST00000556994 PLEKHF1Q96S99 279 aa14.4□□□□□ -0.1
SRP54-213ENST00000556994 PANK2Q9BZ23 570 aa14.4□□□□□ -0.1
SRP54-213ENST00000556994 KIDINS220Q9ULH0 1771 aa14.4□□□□□ -0.1
SRP54-213ENST00000556994 ANKRD36BQ8N2N9 1353 aa14.4□□□□□ -0.1
SRP54-213ENST00000556994 GOLGA6L3A6NEY3 463 aa14.39□□□□□ -0.11
SRP54-213ENST00000556994 DDX19BQ9UMR2 479 aa14.39□□□□□ -0.11
SRP54-213ENST00000556994 HDAC1Q13547 482 aaPredicted RBP14.38□□□□□ -0.11
SRP54-213ENST00000556994 CHMP5Q9NZZ3 219 aa14.38□□□□□ -0.11
SRP54-213ENST00000556994 PPLO60437 1756 aa14.38□□□□□ -0.11
SRP54-213ENST00000556994 RIPK4P57078 832 aa14.38□□□□□ -0.11
SRP54-213ENST00000556994 SRPK2P78362 688 aaKnown RBP14.38□□□□□ -0.11
SRP54-213ENST00000556994 TULP4Q9NRJ4 1543 aa14.37□□□□□ -0.11
SRP54-213ENST00000556994 TRAK2O60296 914 aa14.37□□□□□ -0.11
SRP54-213ENST00000556994 LNPKQ9C0E8 428 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms