RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 SPATA31E1Q6ZUB1 1445 aa25.42■■□□□ 1.66
CHGA-206ENST00000556876 ESCO1Q5FWF5 840 aa25.41■■□□□ 1.66
CHGA-206ENST00000556876 SIRT1Q96EB6 747 aa25.41■■□□□ 1.66
CHGA-206ENST00000556876 NALCNQ8IZF0 1738 aa25.4■■□□□ 1.66
CHGA-206ENST00000556876 UPF1Q92900 1129 aaKnown RBP eCLIP25.4■■□□□ 1.66
CHGA-206ENST00000556876 TECPR2O15040 1411 aa25.39■■□□□ 1.66
CHGA-206ENST00000556876 STK26Q9P289 416 aa25.38■■□□□ 1.65
CHGA-206ENST00000556876 PPLO60437 1756 aa25.38■■□□□ 1.65
CHGA-206ENST00000556876 ADAMTS2O95450 1211 aa25.37■■□□□ 1.65
CHGA-206ENST00000556876 SETD1AO15047 1707 aaKnown RBP25.37■■□□□ 1.65
CHGA-206ENST00000556876 LAMC1P11047 1609 aa25.37■■□□□ 1.65
CHGA-206ENST00000556876 FNBP4Q8N3X1 1017 aaPredicted RBP25.34■■□□□ 1.65
CHGA-206ENST00000556876 TRPC5Q9UL62 973 aaPredicted RBP25.34■■□□□ 1.65
CHGA-206ENST00000556876 PIK3C2GO75747 1445 aa25.33■■□□□ 1.65
CHGA-206ENST00000556876 CDC42BPGQ6DT37 1551 aa25.33■■□□□ 1.65
CHGA-206ENST00000556876 WAPLQ7Z5K2 1190 aa25.33■■□□□ 1.65
CHGA-206ENST00000556876 C14orf93Q9H972 538 aaKnown RBP25.33■■□□□ 1.65
CHGA-206ENST00000556876 USP21Q9UK80 565 aa25.33■■□□□ 1.65
CHGA-206ENST00000556876 DHX57Q6P158 1386 aaKnown RBP25.31■■□□□ 1.64
CHGA-206ENST00000556876 FOXO3O43524 673 aa25.31■■□□□ 1.64
CHGA-206ENST00000556876 TMEM132EQ6IEE7 984 aa25.31■■□□□ 1.64
CHGA-206ENST00000556876 STAC3Q96MF2 364 aa25.29■■□□□ 1.64
CHGA-206ENST00000556876 YTHDC2Q9H6S0 1430 aaKnown RBP25.29■■□□□ 1.64
CHGA-206ENST00000556876 PSME1Q06323 249 aa25.25■■□□□ 1.63
CHGA-206ENST00000556876 HRCP23327 699 aa25.23■■□□□ 1.63
CHGA-206ENST00000556876 NUTM2FA1L443 756 aa25.22■■□□□ 1.63
CHGA-206ENST00000556876 MYOM2P54296 1465 aa25.21■■□□□ 1.63
CHGA-206ENST00000556876 PXDNQ92626 1479 aa25.21■■□□□ 1.63
CHGA-206ENST00000556876 CFAP70Q5T0N1 1121 aa25.21■■□□□ 1.63
CHGA-206ENST00000556876 NRXN1Q9ULB1 1477 aa25.21■■□□□ 1.63
CHGA-206ENST00000556876 RGS12O14924 1447 aa25.2■■□□□ 1.63
CHGA-206ENST00000556876 PLEKHH1Q9ULM0 1364 aa25.2■■□□□ 1.63
CHGA-206ENST00000556876 KRT28Q7Z3Y7 464 aa25.2■■□□□ 1.62
CHGA-206ENST00000556876 ATAD2Q6PL18 1390 aa25.19■■□□□ 1.62
CHGA-206ENST00000556876 COL22A1Q8NFW1 1626 aaPredicted RBP25.19■■□□□ 1.62
CHGA-206ENST00000556876 RAB3GAP2Q9H2M9 1393 aa25.19■■□□□ 1.62
CHGA-206ENST00000556876 SPATA31A3Q5VYP0 1347 aa25.19■■□□□ 1.62
CHGA-206ENST00000556876 POGKQ9P215 609 aa25.19■■□□□ 1.62
CHGA-206ENST00000556876 XPCQ01831 940 aaPredicted RBP25.18■■□□□ 1.62
CHGA-206ENST00000556876 PHF8Q9UPP1 1060 aa25.18■■□□□ 1.62
CHGA-206ENST00000556876 KNDC1Q76NI1 1749 aa25.17■■□□□ 1.62
CHGA-206ENST00000556876 IFT172Q9UG01 1749 aa25.17■■□□□ 1.62
CHGA-206ENST00000556876 ATRNO75882 1429 aa25.16■■□□□ 1.62
CHGA-206ENST00000556876 PRAM1Q96QH2 718 aa25.16■■□□□ 1.62
CHGA-206ENST00000556876 CCDC125Q86Z20 511 aa25.15■■□□□ 1.62
CHGA-206ENST00000556876 GJD4Q96KN9 370 aaPredicted RBP25.14■■□□□ 1.62
CHGA-206ENST00000556876 HAP1P54257 671 aaPredicted RBP25.13■■□□□ 1.61
CHGA-206ENST00000556876 EIF3AQ14152 1382 aaKnown RBP25.13■■□□□ 1.61
CHGA-206ENST00000556876 UNC5CLQ8IV45 518 aa25.12■■□□□ 1.61
CHGA-206ENST00000556876 SBNO1A3KN83 1393 aa25.12■■□□□ 1.61
CHGA-206ENST00000556876 KIF1AQ12756 1690 aa25.1■■□□□ 1.61
CHGA-206ENST00000556876 BCL9LQ86UU0 1499 aa25.1■■□□□ 1.61
CHGA-206ENST00000556876 ARHGEF10O15013 1369 aa25.1■■□□□ 1.61
CHGA-206ENST00000556876 DLC1Q96QB1 1528 aa25.1■■□□□ 1.61
CHGA-206ENST00000556876 ANKARQ7Z5J8 1434 aa25.1■■□□□ 1.61
CHGA-206ENST00000556876 SAFB2Q14151 953 aaKnown RBP eCLIP25.08■■□□□ 1.61
CHGA-206ENST00000556876 DCAF11Q8TEB1 546 aa25.08■■□□□ 1.61
CHGA-206ENST00000556876 FMN2Q9NZ56 1722 aa25.07■■□□□ 1.6
CHGA-206ENST00000556876 TNS3Q68CZ2 1445 aa25.06■■□□□ 1.6
CHGA-206ENST00000556876 TRAK1Q9UPV9 953 aa25.05■■□□□ 1.6
CHGA-206ENST00000556876 KDM2AQ9Y2K7 1162 aa25.04■■□□□ 1.6
CHGA-206ENST00000556876 GPRASP1Q5JY77 1395 aa25.04■■□□□ 1.6
CHGA-206ENST00000556876 LMOD2Q6P5Q4 547 aa25.03■■□□□ 1.6
CHGA-206ENST00000556876 SLIT2O94813 1529 aa25.02■■□□□ 1.6
CHGA-206ENST00000556876 VPS72Q15906 364 aa25.01■■□□□ 1.59
CHGA-206ENST00000556876 WASLO00401 505 aaPredicted RBP25■■□□□ 1.59
CHGA-206ENST00000556876 PMFBP1Q8TBY8 1022 aa24.99■■□□□ 1.59
CHGA-206ENST00000556876 ADGRB1O14514 1584 aa24.97■■□□□ 1.59
CHGA-206ENST00000556876 ZRANB1Q9UGI0 708 aa24.97■■□□□ 1.59
CHGA-206ENST00000556876 MINK1Q8N4C8 1332 aaPredicted RBP24.96■■□□□ 1.59
CHGA-206ENST00000556876 ONECUT3O60422 494 aaPredicted RBP24.95■■□□□ 1.58
CHGA-206ENST00000556876 NGDNQ8NEJ9 315 aaKnown RBP24.95■■□□□ 1.58
CHGA-206ENST00000556876 CABLES1Q8TDN4 633 aa24.95■■□□□ 1.58
CHGA-206ENST00000556876 HIRIP3Q9BW71 556 aaPredicted RBP24.95■■□□□ 1.58
CHGA-206ENST00000556876 ADGRB2O60241 1585 aa24.95■■□□□ 1.58
CHGA-206ENST00000556876 RALGAPBQ86X10 1494 aa24.95■■□□□ 1.58
CHGA-206ENST00000556876 CCDC9Q9Y3X0 531 aaKnown RBP24.94■■□□□ 1.58
CHGA-206ENST00000556876 MARF1Q9Y4F3 1742 aaKnown RBP24.94■■□□□ 1.58
CHGA-206ENST00000556876 USP32Q8NFA0 1604 aa24.93■■□□□ 1.58
CHGA-206ENST00000556876 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.92■■□□□ 1.58
CHGA-206ENST00000556876 FAM83GA6ND36 823 aa24.91■■□□□ 1.58
CHGA-206ENST00000556876 SF3B2Q13435 895 aaKnown RBP24.91■■□□□ 1.58
CHGA-206ENST00000556876 SEPT12Q8IYM1 358 aa24.91■■□□□ 1.58
CHGA-206ENST00000556876 TULP4Q9NRJ4 1543 aa24.9■■□□□ 1.58
CHGA-206ENST00000556876 BLMP54132 1417 aaPredicted RBP24.88■■□□□ 1.57
CHGA-206ENST00000556876 EP400Q96L91 3159 aa24.88■■□□□ 1.57
CHGA-206ENST00000556876 PRR36Q9H6K5 1346 aa24.87■■□□□ 1.57
CHGA-206ENST00000556876 NUDT16Q96DE0 195 aaKnown RBP24.87■■□□□ 1.57
CHGA-206ENST00000556876 PAK3O75914 559 aaPredicted RBP24.86■■□□□ 1.57
CHGA-206ENST00000556876 PLEKHG5O94827 1062 aa24.86■■□□□ 1.57
CHGA-206ENST00000556876 KRT27Q7Z3Y8 459 aa24.86■■□□□ 1.57
CHGA-206ENST00000556876 BTG4Q9NY30 223 aa24.85■■□□□ 1.57
CHGA-206ENST00000556876 CCDC61Q9Y6R9 512 aa24.85■■□□□ 1.57
CHGA-206ENST00000556876 GLI3P10071 1580 aa24.83■■□□□ 1.57
CHGA-206ENST00000556876 CDK19Q9BWU1 502 aa24.82■■□□□ 1.56
CHGA-206ENST00000556876 NWD2Q9ULI1 1742 aa24.82■■□□□ 1.56
CHGA-206ENST00000556876 RGPD8O14715 1765 aaPredicted RBP24.82■■□□□ 1.56
CHGA-206ENST00000556876 SRCAPQ6ZRS2 3230 aa24.82■■□□□ 1.56
CHGA-206ENST00000556876 A0A0G2JS52 829 aa24.8■■□□□ 1.56
CHGA-206ENST00000556876 MYT1Q01538 1121 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms