RNA–Protein interactions for RNA: ENST00000556790.1

LGMN-213, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-213ENST00000556790 PIAS4Q8N2W9 510 aaPredicted RBP9.39□□□□□ -0.91
LGMN-213ENST00000556790 MEX3CQ5U5Q3 659 aaKnown RBP9.38□□□□□ -0.91
LGMN-213ENST00000556790 DCCP43146 1447 aa9.38□□□□□ -0.91
LGMN-213ENST00000556790 ANKRD30BQ9BXX2 1392 aa9.37□□□□□ -0.91
LGMN-213ENST00000556790 YTHDC2Q9H6S0 1430 aaKnown RBP9.37□□□□□ -0.91
LGMN-213ENST00000556790 KNDC1Q76NI1 1749 aa9.36□□□□□ -0.91
LGMN-213ENST00000556790 ESCO1Q5FWF5 840 aa9.36□□□□□ -0.91
LGMN-213ENST00000556790 LRPPRCP42704 1394 aaKnown RBP9.36□□□□□ -0.91
LGMN-213ENST00000556790 ADAMTS2O95450 1211 aa9.35□□□□□ -0.91
LGMN-213ENST00000556790 DCAF11Q8TEB1 546 aa9.35□□□□□ -0.91
LGMN-213ENST00000556790 DHX57Q6P158 1386 aaKnown RBP9.35□□□□□ -0.91
LGMN-213ENST00000556790 PNPLA6Q8IY17 1366 aa9.35□□□□□ -0.91
LGMN-213ENST00000556790 NRXN1Q9ULB1 1477 aa9.34□□□□□ -0.91
LGMN-213ENST00000556790 FMN2Q9NZ56 1722 aa9.34□□□□□ -0.91
LGMN-213ENST00000556790 FOXO3O43524 673 aa9.34□□□□□ -0.91
LGMN-213ENST00000556790 C8orf37Q96NL8 207 aa9.34□□□□□ -0.91
LGMN-213ENST00000556790 PRAM1Q96QH2 718 aa9.34□□□□□ -0.91
LGMN-213ENST00000556790 HIRIP3Q9BW71 556 aaPredicted RBP9.34□□□□□ -0.91
LGMN-213ENST00000556790 C14orf93Q9H972 538 aaKnown RBP9.34□□□□□ -0.91
LGMN-213ENST00000556790 TRAK1Q9UPV9 953 aa9.34□□□□□ -0.91
LGMN-213ENST00000556790 MYOM2P54296 1465 aa9.34□□□□□ -0.91
LGMN-213ENST00000556790 CDC42BPGQ6DT37 1551 aa9.33□□□□□ -0.92
LGMN-213ENST00000556790 PRAG1Q86YV5 1406 aa9.33□□□□□ -0.92
LGMN-213ENST00000556790 ABCC11Q96J66 1382 aa9.33□□□□□ -0.92
LGMN-213ENST00000556790 AFF2P51816 1311 aa9.32□□□□□ -0.92
LGMN-213ENST00000556790 SPATA31A6Q5VVP1 1343 aa9.32□□□□□ -0.92
LGMN-213ENST00000556790 TECPR2O15040 1411 aa9.32□□□□□ -0.92
LGMN-213ENST00000556790 USP32Q8NFA0 1604 aa9.32□□□□□ -0.92
LGMN-213ENST00000556790 PXDNQ92626 1479 aa9.32□□□□□ -0.92
LGMN-213ENST00000556790 ADGRB1O14514 1584 aa9.32□□□□□ -0.92
LGMN-213ENST00000556790 MINK1Q8N4C8 1332 aaPredicted RBP9.31□□□□□ -0.92
LGMN-213ENST00000556790 LAMC1P11047 1609 aa9.31□□□□□ -0.92
LGMN-213ENST00000556790 PMFBP1Q8TBY8 1022 aa9.31□□□□□ -0.92
LGMN-213ENST00000556790 LRRC59Q96AG4 307 aaKnown RBP9.31□□□□□ -0.92
LGMN-213ENST00000556790 SIN3AQ96ST3 1273 aa9.31□□□□□ -0.92
LGMN-213ENST00000556790 SOS2Q07890 1332 aaPredicted RBP9.31□□□□□ -0.92
LGMN-213ENST00000556790 NBPF1Q3BBV0 1214 aa9.29□□□□□ -0.92
LGMN-213ENST00000556790 CABLES1Q8TDN4 633 aa9.29□□□□□ -0.92
LGMN-213ENST00000556790 POGKQ9P215 609 aa9.29□□□□□ -0.92
LGMN-213ENST00000556790 PRR36Q9H6K5 1346 aa9.29□□□□□ -0.92
LGMN-213ENST00000556790 EP400Q96L91 3159 aa9.28□□□□□ -0.92
LGMN-213ENST00000556790 ARHGEF28Q8N1W1 1705 aaKnown RBP9.28□□□□□ -0.92
LGMN-213ENST00000556790 NGLY1Q96IV0 654 aa9.28□□□□□ -0.92
LGMN-213ENST00000556790 COL22A1Q8NFW1 1626 aaPredicted RBP9.27□□□□□ -0.92
LGMN-213ENST00000556790 NEUROD1Q13562 356 aa9.27□□□□□ -0.93
LGMN-213ENST00000556790 KRT28Q7Z3Y7 464 aa9.27□□□□□ -0.93
LGMN-213ENST00000556790 MARF1Q9Y4F3 1742 aaKnown RBP9.26□□□□□ -0.93
LGMN-213ENST00000556790 RGS12O14924 1447 aa9.26□□□□□ -0.93
LGMN-213ENST00000556790 ZNF772Q68DY9 489 aaPredicted RBP9.26□□□□□ -0.93
LGMN-213ENST00000556790 LMOD2Q6P5Q4 547 aa9.26□□□□□ -0.93
LGMN-213ENST00000556790 QTRT2Q9H974 415 aaKnown RBP9.26□□□□□ -0.93
LGMN-213ENST00000556790 PHF8Q9UPP1 1060 aa9.26□□□□□ -0.93
LGMN-213ENST00000556790 NPHP3Q7Z494 1330 aa9.26□□□□□ -0.93
LGMN-213ENST00000556790 DLC1Q96QB1 1528 aa9.26□□□□□ -0.93
LGMN-213ENST00000556790 HRCP23327 699 aa9.25□□□□□ -0.93
LGMN-213ENST00000556790 RXRBP28702 533 aa9.25□□□□□ -0.93
LGMN-213ENST00000556790 KIF1AQ12756 1690 aa9.25□□□□□ -0.93
LGMN-213ENST00000556790 ABCA3Q99758 1704 aa9.25□□□□□ -0.93
LGMN-213ENST00000556790 USP21Q9UK80 565 aa9.24□□□□□ -0.93
LGMN-213ENST00000556790 SPATA31A3Q5VYP0 1347 aa9.24□□□□□ -0.93
LGMN-213ENST00000556790 ADGRB2O60241 1585 aa9.24□□□□□ -0.93
LGMN-213ENST00000556790 TRPM3Q9HCF6 1732 aaPredicted RBP9.23□□□□□ -0.93
LGMN-213ENST00000556790 L3MBTL2Q969R5 705 aa9.23□□□□□ -0.93
LGMN-213ENST00000556790 SIRT1Q96EB6 747 aa9.23□□□□□ -0.93
LGMN-213ENST00000556790 WASLO00401 505 aaPredicted RBP9.22□□□□□ -0.93
LGMN-213ENST00000556790 PSME1Q06323 249 aa9.22□□□□□ -0.93
LGMN-213ENST00000556790 NUTM2GQ5VZR2 741 aa9.22□□□□□ -0.93
LGMN-213ENST00000556790 UPF1Q92900 1129 aaKnown RBP eCLIP9.22□□□□□ -0.932e-6■■□□□ 12.3
LGMN-213ENST00000556790 TNS3Q68CZ2 1445 aa9.22□□□□□ -0.93
LGMN-213ENST00000556790 SRCAPQ6ZRS2 3230 aa9.22□□□□□ -0.93
LGMN-213ENST00000556790 BCL9LQ86UU0 1499 aa9.21□□□□□ -0.93
LGMN-213ENST00000556790 TULP4Q9NRJ4 1543 aa9.21□□□□□ -0.93
LGMN-213ENST00000556790 PLCH1Q4KWH8 1693 aa9.21□□□□□ -0.93
LGMN-213ENST00000556790 CDK19Q9BWU1 502 aa9.21□□□□□ -0.94
LGMN-213ENST00000556790 ACIN1Q9UKV3 1341 aaKnown RBP9.21□□□□□ -0.94
LGMN-213ENST00000556790 ATP7BP35670 1465 aa9.21□□□□□ -0.94
LGMN-213ENST00000556790 ALS2Q96Q42 1657 aa9.2□□□□□ -0.94
LGMN-213ENST00000556790 QRICH2Q9H0J4 1663 aa9.2□□□□□ -0.94
LGMN-213ENST00000556790 PAK3O75914 559 aaPredicted RBP9.2□□□□□ -0.94
LGMN-213ENST00000556790 RBM6P78332 1123 aaKnown RBP9.2□□□□□ -0.94
LGMN-213ENST00000556790 FNBP4Q8N3X1 1017 aaPredicted RBP9.2□□□□□ -0.94
LGMN-213ENST00000556790 NUDT16Q96DE0 195 aaKnown RBP9.2□□□□□ -0.94
LGMN-213ENST00000556790 CABP2Q9NPB3 220 aa9.2□□□□□ -0.94
LGMN-213ENST00000556790 ATRNO75882 1429 aa9.2□□□□□ -0.94
LGMN-213ENST00000556790 GLI3P10071 1580 aa9.2□□□□□ -0.94
LGMN-213ENST00000556790 KIAA1210Q9ULL0 1709 aa9.19□□□□□ -0.94
LGMN-213ENST00000556790 BRWD3Q6RI45 1802 aa9.19□□□□□ -0.94
LGMN-213ENST00000556790 HAP1P54257 671 aaPredicted RBP9.19□□□□□ -0.94
LGMN-213ENST00000556790 NBPF8Q3BBV2 869 aa9.19□□□□□ -0.94
LGMN-213ENST00000556790 TRPM1Q7Z4N2 1603 aa9.19□□□□□ -0.94
LGMN-213ENST00000556790 CRYBG1Q9Y4K1 1723 aa9.19□□□□□ -0.94
LGMN-213ENST00000556790 ANKARQ7Z5J8 1434 aa9.18□□□□□ -0.94
LGMN-213ENST00000556790 TOPAZ1Q8N9V7 1692 aa9.18□□□□□ -0.94
LGMN-213ENST00000556790 NGDNQ8NEJ9 315 aaKnown RBP9.18□□□□□ -0.94
LGMN-213ENST00000556790 ITSN1Q15811 1721 aa9.17□□□□□ -0.94
LGMN-213ENST00000556790 SLIT2O94813 1529 aa9.17□□□□□ -0.94
LGMN-213ENST00000556790 FAM83GA6ND36 823 aa9.17□□□□□ -0.94
LGMN-213ENST00000556790 TRPC5Q9UL62 973 aaPredicted RBP9.17□□□□□ -0.94
LGMN-213ENST00000556790 RALGAPBQ86X10 1494 aa9.16□□□□□ -0.94
LGMN-213ENST00000556790 CDK12Q9NYV4 1490 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms