RNA–Protein interactions for RNA: ENST00000556674.1

TGFB3-206, Transcript of transforming growth factor beta 3, humanhuman

TSL 3

Gene TGFB3, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-206ENST00000556674 ADGRF5Q8IZF2 1346 aa23.57■■□□□ 1.36
TGFB3-206ENST00000556674 SRCAPQ6ZRS2 3230 aa23.56■■□□□ 1.36
TGFB3-206ENST00000556674 PIK3C2GO75747 1445 aa23.56■■□□□ 1.36
TGFB3-206ENST00000556674 PTCH1Q13635 1447 aa23.55■■□□□ 1.36
TGFB3-206ENST00000556674 NRXN1Q9ULB1 1477 aa23.54■■□□□ 1.36
TGFB3-206ENST00000556674 LAMC1P11047 1609 aa23.53■■□□□ 1.36
TGFB3-206ENST00000556674 ADAMTS2O95450 1211 aa23.52■■□□□ 1.36
TGFB3-206ENST00000556674 NGLY1Q96IV0 654 aa23.52■■□□□ 1.36
TGFB3-206ENST00000556674 ATAD2Q6PL18 1390 aa23.52■■□□□ 1.36
TGFB3-206ENST00000556674 ADGRL3Q9HAR2 1447 aa23.49■■□□□ 1.35
TGFB3-206ENST00000556674 NALCNQ8IZF0 1738 aa23.46■■□□□ 1.35
TGFB3-206ENST00000556674 C14orf93Q9H972 538 aaKnown RBP23.46■■□□□ 1.35
TGFB3-206ENST00000556674 TECPR2O15040 1411 aa23.45■■□□□ 1.34
TGFB3-206ENST00000556674 LRPPRCP42704 1394 aaKnown RBP23.45■■□□□ 1.34
TGFB3-206ENST00000556674 ZRANB1Q9UGI0 708 aa23.45■■□□□ 1.34
TGFB3-206ENST00000556674 USP21Q9UK80 565 aa23.45■■□□□ 1.34
TGFB3-206ENST00000556674 DCAF11Q8TEB1 546 aa23.44■■□□□ 1.34
TGFB3-206ENST00000556674 ABCC11Q96J66 1382 aa23.43■■□□□ 1.34
TGFB3-206ENST00000556674 ROBO2Q9HCK4 1378 aa23.43■■□□□ 1.34
TGFB3-206ENST00000556674 KNDC1Q76NI1 1749 aa23.43■■□□□ 1.34
TGFB3-206ENST00000556674 TRPC5Q9UL62 973 aaPredicted RBP23.42■■□□□ 1.34
TGFB3-206ENST00000556674 C1orf167Q5SNV9 1468 aa23.42■■□□□ 1.34
TGFB3-206ENST00000556674 DHX57Q6P158 1386 aaKnown RBP23.41■■□□□ 1.34
TGFB3-206ENST00000556674 YTHDC2Q9H6S0 1430 aaKnown RBP23.41■■□□□ 1.34
TGFB3-206ENST00000556674 SIRT1Q96EB6 747 aa23.39■■□□□ 1.33
TGFB3-206ENST00000556674 SOS2Q07890 1332 aaPredicted RBP23.38■■□□□ 1.33
TGFB3-206ENST00000556674 CFAP70Q5T0N1 1121 aa23.38■■□□□ 1.33
TGFB3-206ENST00000556674 FNBP4Q8N3X1 1017 aaPredicted RBP23.38■■□□□ 1.33
TGFB3-206ENST00000556674 ATRNO75882 1429 aa23.37■■□□□ 1.33
TGFB3-206ENST00000556674 ORAI2Q96SN7 254 aa23.37■■□□□ 1.33
TGFB3-206ENST00000556674 KDM2AQ9Y2K7 1162 aa23.37■■□□□ 1.33
TGFB3-206ENST00000556674 TMEM132EQ6IEE7 984 aa23.36■■□□□ 1.33
TGFB3-206ENST00000556674 STK26Q9P289 416 aa23.35■■□□□ 1.33
TGFB3-206ENST00000556674 CDC42BPGQ6DT37 1551 aa23.33■■□□□ 1.33
TGFB3-206ENST00000556674 COL22A1Q8NFW1 1626 aaPredicted RBP23.33■■□□□ 1.32
TGFB3-206ENST00000556674 DLC1Q96QB1 1528 aa23.33■■□□□ 1.32
TGFB3-206ENST00000556674 ADGRB1O14514 1584 aa23.32■■□□□ 1.32
TGFB3-206ENST00000556674 CCDC125Q86Z20 511 aa23.32■■□□□ 1.32
TGFB3-206ENST00000556674 KIAA1210Q9ULL0 1709 aa23.3■■□□□ 1.32
TGFB3-206ENST00000556674 EP400Q96L91 3159 aa23.3■■□□□ 1.32
TGFB3-206ENST00000556674 BCL9LQ86UU0 1499 aa23.3■■□□□ 1.32
TGFB3-206ENST00000556674 WAPLQ7Z5K2 1190 aa23.26■■□□□ 1.31
TGFB3-206ENST00000556674 GJD4Q96KN9 370 aaPredicted RBP23.24■■□□□ 1.31
TGFB3-206ENST00000556674 MARF1Q9Y4F3 1742 aaKnown RBP23.23■■□□□ 1.31
TGFB3-206ENST00000556674 SIN3AQ96ST3 1273 aa23.23■■□□□ 1.31
TGFB3-206ENST00000556674 POGKQ9P215 609 aa23.23■■□□□ 1.31
TGFB3-206ENST00000556674 PLEKHH1Q9ULM0 1364 aa23.23■■□□□ 1.31
TGFB3-206ENST00000556674 NEUROD1Q13562 356 aa23.22■■□□□ 1.31
TGFB3-206ENST00000556674 L3MBTL2Q969R5 705 aa23.22■■□□□ 1.31
TGFB3-206ENST00000556674 PRAM1Q96QH2 718 aa23.22■■□□□ 1.31
TGFB3-206ENST00000556674 PXDNQ92626 1479 aa23.2■■□□□ 1.3
TGFB3-206ENST00000556674 BLMP54132 1417 aaPredicted RBP23.2■■□□□ 1.3
TGFB3-206ENST00000556674 NPHP3Q7Z494 1330 aa23.2■■□□□ 1.3
TGFB3-206ENST00000556674 TRAK1Q9UPV9 953 aa23.2■■□□□ 1.3
TGFB3-206ENST00000556674 ESCO1Q5FWF5 840 aa23.19■■□□□ 1.3
TGFB3-206ENST00000556674 ADGRB2O60241 1585 aa23.18■■□□□ 1.3
TGFB3-206ENST00000556674 XPCQ01831 940 aaPredicted RBP23.18■■□□□ 1.3
TGFB3-206ENST00000556674 FMN2Q9NZ56 1722 aa23.18■■□□□ 1.3
TGFB3-206ENST00000556674 GLI3P10071 1580 aa23.17■■□□□ 1.3
TGFB3-206ENST00000556674 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.16■■□□□ 1.3
TGFB3-206ENST00000556674 EIF3AQ14152 1382 aaKnown RBP23.16■■□□□ 1.3
TGFB3-206ENST00000556674 FOXO3O43524 673 aa23.16■■□□□ 1.3
TGFB3-206ENST00000556674 DEFB132Q7Z7B7 95 aa23.16■■□□□ 1.3
TGFB3-206ENST00000556674 RALGAPBQ86X10 1494 aa23.16■■□□□ 1.3
TGFB3-206ENST00000556674 ARHGEF28Q8N1W1 1705 aaKnown RBP23.16■■□□□ 1.3
TGFB3-206ENST00000556674 TONSLQ96HA7 1378 aa23.14■■□□□ 1.3
TGFB3-206ENST00000556674 SAFB2Q14151 953 aaKnown RBP eCLIP23.13■■□□□ 1.29
TGFB3-206ENST00000556674 UNC5CLQ8IV45 518 aa23.13■■□□□ 1.29
TGFB3-206ENST00000556674 SLIT2O94813 1529 aa23.13■■□□□ 1.29
TGFB3-206ENST00000556674 KIF1AQ12756 1690 aa23.13■■□□□ 1.29
TGFB3-206ENST00000556674 ANKARQ7Z5J8 1434 aa23.12■■□□□ 1.29
TGFB3-206ENST00000556674 BRWD3Q6RI45 1802 aa23.11■■□□□ 1.29
TGFB3-206ENST00000556674 LRP5O75197 1615 aa23.11■■□□□ 1.29
TGFB3-206ENST00000556674 TRPM1Q7Z4N2 1603 aa23.11■■□□□ 1.29
TGFB3-206ENST00000556674 CLSPNQ9HAW4 1339 aa23.1■■□□□ 1.29
TGFB3-206ENST00000556674 PCGF6Q9BYE7 350 aa23.1■■□□□ 1.29
TGFB3-206ENST00000556674 NBPF1Q3BBV0 1214 aa23.09■■□□□ 1.29
TGFB3-206ENST00000556674 NUTM2FA1L443 756 aa23.08■■□□□ 1.29
TGFB3-206ENST00000556674 SF3B2Q13435 895 aaKnown RBP23.08■■□□□ 1.29
TGFB3-206ENST00000556674 MINK1Q8N4C8 1332 aaPredicted RBP23.07■■□□□ 1.28
TGFB3-206ENST00000556674 ROCK2O75116 1388 aaKnown RBP23.06■■□□□ 1.28
TGFB3-206ENST00000556674 WASLO00401 505 aaPredicted RBP23.06■■□□□ 1.28
TGFB3-206ENST00000556674 SEPT12Q8IYM1 358 aa23.06■■□□□ 1.28
TGFB3-206ENST00000556674 TULP4Q9NRJ4 1543 aa23.06■■□□□ 1.28
TGFB3-206ENST00000556674 USP32Q8NFA0 1604 aa23.04■■□□□ 1.28
TGFB3-206ENST00000556674 SPATA31A3Q5VYP0 1347 aa23.04■■□□□ 1.28
TGFB3-206ENST00000556674 HIRIP3Q9BW71 556 aaPredicted RBP23.03■■□□□ 1.28
TGFB3-206ENST00000556674 PHF8Q9UPP1 1060 aa23.03■■□□□ 1.28
TGFB3-206ENST00000556674 CENPJQ9HC77 1338 aaPredicted RBP23.03■■□□□ 1.28
TGFB3-206ENST00000556674 GPRASP1Q5JY77 1395 aa23.01■■□□□ 1.27
TGFB3-206ENST00000556674 PSDA5PKW4 1024 aaPredicted RBP23.01■■□□□ 1.27
TGFB3-206ENST00000556674 RGPD8O14715 1765 aaPredicted RBP23.01■■□□□ 1.27
TGFB3-206ENST00000556674 VPS72Q15906 364 aa23■■□□□ 1.27
TGFB3-206ENST00000556674 TIMELESSQ9UNS1 1208 aa23■■□□□ 1.27
TGFB3-206ENST00000556674 PSME1Q06323 249 aa22.99■■□□□ 1.27
TGFB3-206ENST00000556674 KRT27Q7Z3Y8 459 aa22.99■■□□□ 1.27
TGFB3-206ENST00000556674 ITSN1Q15811 1721 aa22.99■■□□□ 1.27
TGFB3-206ENST00000556674 ONECUT3O60422 494 aaPredicted RBP22.98■■□□□ 1.27
TGFB3-206ENST00000556674 NBPF8Q3BBV2 869 aa22.97■■□□□ 1.27
TGFB3-206ENST00000556674 KRT28Q7Z3Y7 464 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms