RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 COL22A1Q8NFW1 1626 aaPredicted RBP21.22■□□□□ 0.99
ACTN1-219ENST00000556432 KIF1BO60333 1816 aa21.21■□□□□ 0.99
ACTN1-219ENST00000556432 MYOM2P54296 1465 aa21.2■□□□□ 0.98
ACTN1-219ENST00000556432 XPCQ01831 940 aaPredicted RBP21.2■□□□□ 0.98
ACTN1-219ENST00000556432 HFM1A2PYH4 1435 aa21.19■□□□□ 0.98
ACTN1-219ENST00000556432 BCL9LQ86UU0 1499 aa21.18■□□□□ 0.98
ACTN1-219ENST00000556432 GJD4Q96KN9 370 aaPredicted RBP21.17■□□□□ 0.98
ACTN1-219ENST00000556432 FOXO3O43524 673 aa21.16■□□□□ 0.98
ACTN1-219ENST00000556432 PXDNQ92626 1479 aa21.14■□□□□ 0.98
ACTN1-219ENST00000556432 PPARGC1BQ86YN6 1023 aaKnown RBP21.14■□□□□ 0.97
ACTN1-219ENST00000556432 PRAG1Q86YV5 1406 aa21.13■□□□□ 0.97
ACTN1-219ENST00000556432 MARF1Q9Y4F3 1742 aaKnown RBP21.13■□□□□ 0.97
ACTN1-219ENST00000556432 NUTM2FA1L443 756 aa21.13■□□□□ 0.97
ACTN1-219ENST00000556432 CDC42BPGQ6DT37 1551 aa21.13■□□□□ 0.97
ACTN1-219ENST00000556432 LRPPRCP42704 1394 aaKnown RBP21.12■□□□□ 0.97
ACTN1-219ENST00000556432 SF3B2Q13435 895 aaKnown RBP21.12■□□□□ 0.97
ACTN1-219ENST00000556432 BLMP54132 1417 aaPredicted RBP21.12■□□□□ 0.97
ACTN1-219ENST00000556432 RPGRIP1LQ68CZ1 1315 aa21.1■□□□□ 0.97
ACTN1-219ENST00000556432 RALGAPBQ86X10 1494 aa21.1■□□□□ 0.97
ACTN1-219ENST00000556432 UNC5CLQ8IV45 518 aa21.1■□□□□ 0.97
ACTN1-219ENST00000556432 HAP1P54257 671 aaPredicted RBP21.09■□□□□ 0.97
ACTN1-219ENST00000556432 STK26Q9P289 416 aa21.09■□□□□ 0.97
ACTN1-219ENST00000556432 NAIPQ13075 1403 aa21.09■□□□□ 0.97
ACTN1-219ENST00000556432 DEFB132Q7Z7B7 95 aa21.08■□□□□ 0.97
ACTN1-219ENST00000556432 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.07■□□□□ 0.96
ACTN1-219ENST00000556432 GLI3P10071 1580 aa21.06■□□□□ 0.96
ACTN1-219ENST00000556432 PLEKHG5O94827 1062 aa21.05■□□□□ 0.96
ACTN1-219ENST00000556432 CCDC9Q9Y3X0 531 aaKnown RBP21.05■□□□□ 0.96
ACTN1-219ENST00000556432 PPLO60437 1756 aa21.05■□□□□ 0.96
ACTN1-219ENST00000556432 SLIT2O94813 1529 aa21.04■□□□□ 0.96
ACTN1-219ENST00000556432 WAPLQ7Z5K2 1190 aa21.04■□□□□ 0.96
ACTN1-219ENST00000556432 SEPT12Q8IYM1 358 aa21.03■□□□□ 0.96
ACTN1-219ENST00000556432 SLC4A1APQ9BWU0 796 aaKnown RBP21.03■□□□□ 0.96
ACTN1-219ENST00000556432 SPATA31A3Q5VYP0 1347 aa21.03■□□□□ 0.96
ACTN1-219ENST00000556432 CCDC144AA2RUR9 1427 aa21.02■□□□□ 0.96
ACTN1-219ENST00000556432 USP32Q8NFA0 1604 aa21.01■□□□□ 0.95
ACTN1-219ENST00000556432 A0A0G2JS52 829 aa21.01■□□□□ 0.95
ACTN1-219ENST00000556432 MYT1Q01538 1121 aa21.01■□□□□ 0.95
ACTN1-219ENST00000556432 BRWD3Q6RI45 1802 aa21.01■□□□□ 0.95
ACTN1-219ENST00000556432 KRT28Q7Z3Y7 464 aa21■□□□□ 0.95
ACTN1-219ENST00000556432 ADGRF5Q8IZF2 1346 aa21■□□□□ 0.95
ACTN1-219ENST00000556432 RRBP1Q9P2E9 1410 aaKnown RBP20.98■□□□□ 0.95
ACTN1-219ENST00000556432 LMOD2Q6P5Q4 547 aa20.98■□□□□ 0.95
ACTN1-219ENST00000556432 KIF1AQ12756 1690 aa20.98■□□□□ 0.95
ACTN1-219ENST00000556432 PLEKHH1Q9ULM0 1364 aa20.97■□□□□ 0.95
ACTN1-219ENST00000556432 VPS72Q15906 364 aa20.97■□□□□ 0.95
ACTN1-219ENST00000556432 RGL3Q3MIN7 710 aa20.97■□□□□ 0.95
ACTN1-219ENST00000556432 KRT27Q7Z3Y8 459 aa20.97■□□□□ 0.95
ACTN1-219ENST00000556432 CABLES1Q8TDN4 633 aa20.97■□□□□ 0.95
ACTN1-219ENST00000556432 LRP5O75197 1615 aa20.96■□□□□ 0.95
ACTN1-219ENST00000556432 TECPR2O15040 1411 aa20.96■□□□□ 0.95
ACTN1-219ENST00000556432 PSDA5PKW4 1024 aaPredicted RBP20.96■□□□□ 0.95
ACTN1-219ENST00000556432 TMEM132EQ6IEE7 984 aa20.96■□□□□ 0.95
ACTN1-219ENST00000556432 TNS3Q68CZ2 1445 aa20.95■□□□□ 0.95
ACTN1-219ENST00000556432 FMN2Q9NZ56 1722 aa20.95■□□□□ 0.94
ACTN1-219ENST00000556432 PSME1Q06323 249 aa20.95■□□□□ 0.94
ACTN1-219ENST00000556432 BAG6P46379 1132 aa20.94■□□□□ 0.94
ACTN1-219ENST00000556432 PHF8Q9UPP1 1060 aa20.93■□□□□ 0.94
ACTN1-219ENST00000556432 ABCC11Q96J66 1382 aa20.93■□□□□ 0.94
ACTN1-219ENST00000556432 PLCH1Q4KWH8 1693 aa20.93■□□□□ 0.94
ACTN1-219ENST00000556432 KNDC1Q76NI1 1749 aa20.91■□□□□ 0.94
ACTN1-219ENST00000556432 ANKRD30BQ9BXX2 1392 aa20.91■□□□□ 0.94
ACTN1-219ENST00000556432 NWD2Q9ULI1 1742 aa20.9■□□□□ 0.94
ACTN1-219ENST00000556432 YTHDC2Q9H6S0 1430 aaKnown RBP20.89■□□□□ 0.94
ACTN1-219ENST00000556432 ARHGEF10O15013 1369 aa20.89■□□□□ 0.93
ACTN1-219ENST00000556432 HRCP23327 699 aa20.89■□□□□ 0.93
ACTN1-219ENST00000556432 ONECUT3O60422 494 aaPredicted RBP20.88■□□□□ 0.93
ACTN1-219ENST00000556432 FAM98CQ17RN3 349 aaKnown RBP20.88■□□□□ 0.93
ACTN1-219ENST00000556432 IFT172Q9UG01 1749 aa20.87■□□□□ 0.93
ACTN1-219ENST00000556432 SBNO1A3KN83 1393 aa20.86■□□□□ 0.93
ACTN1-219ENST00000556432 SAFB2Q14151 953 aaKnown RBP eCLIP20.86■□□□□ 0.93
ACTN1-219ENST00000556432 PIK3C2GO75747 1445 aa20.86■□□□□ 0.93
ACTN1-219ENST00000556432 ABCA3Q99758 1704 aa20.85■□□□□ 0.93
ACTN1-219ENST00000556432 FAM83GA6ND36 823 aa20.85■□□□□ 0.93
ACTN1-219ENST00000556432 SPATA31E1Q6ZUB1 1445 aa20.85■□□□□ 0.93
ACTN1-219ENST00000556432 RGPD8O14715 1765 aaPredicted RBP20.85■□□□□ 0.93
ACTN1-219ENST00000556432 EN1Q05925 392 aaPredicted RBP20.84■□□□□ 0.93
ACTN1-219ENST00000556432 NRXN1Q9ULB1 1477 aa20.83■□□□□ 0.93
ACTN1-219ENST00000556432 BTG4Q9NY30 223 aa20.83■□□□□ 0.93
ACTN1-219ENST00000556432 R3HDM1Q15032 1099 aaKnown RBP20.82■□□□□ 0.92
ACTN1-219ENST00000556432 PMFBP1Q8TBY8 1022 aa20.82■□□□□ 0.92
ACTN1-219ENST00000556432 FAM182BQ5T319 152 aa20.81■□□□□ 0.92
ACTN1-219ENST00000556432 SIRT1Q96EB6 747 aa20.8■□□□□ 0.92
ACTN1-219ENST00000556432 PRAM1Q96QH2 718 aa20.8■□□□□ 0.92
ACTN1-219ENST00000556432 DHX57Q6P158 1386 aaKnown RBP20.8■□□□□ 0.92
ACTN1-219ENST00000556432 POGKQ9P215 609 aa20.79■□□□□ 0.92
ACTN1-219ENST00000556432 RGPD1P0DJD0 1748 aa20.78■□□□□ 0.92
ACTN1-219ENST00000556432 NRAPQ86VF7 1730 aa20.78■□□□□ 0.92
ACTN1-219ENST00000556432 GPRASP1Q5JY77 1395 aa20.76■□□□□ 0.91
ACTN1-219ENST00000556432 CFAP70Q5T0N1 1121 aa20.76■□□□□ 0.91
ACTN1-219ENST00000556432 C14orf93Q9H972 538 aaKnown RBP20.76■□□□□ 0.91
ACTN1-219ENST00000556432 MPHOSPH9Q99550 1183 aa20.75■□□□□ 0.91
ACTN1-219ENST00000556432 ANKARQ7Z5J8 1434 aa20.75■□□□□ 0.91
ACTN1-219ENST00000556432 COL14A1Q05707 1796 aaKnown RBP20.74■□□□□ 0.91
ACTN1-219ENST00000556432 SPATA31A5Q5VU36 1347 aa20.74■□□□□ 0.91
ACTN1-219ENST00000556432 SPATA31A7Q8IWB4 1347 aa20.74■□□□□ 0.91
ACTN1-219ENST00000556432 EZH2Q15910 746 aaKnown RBP20.72■□□□□ 0.91
ACTN1-219ENST00000556432 HIRIP3Q9BW71 556 aaPredicted RBP20.72■□□□□ 0.91
ACTN1-219ENST00000556432 PRDM11Q9NQV5 511 aa20.72■□□□□ 0.91
ACTN1-219ENST00000556432 PAK3O75914 559 aaPredicted RBP20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms