RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 CDC42BPGQ6DT37 1551 aa18.46■□□□□ 0.55
SNX6-207ENST00000556303 LAMC1P11047 1609 aa18.45■□□□□ 0.54
SNX6-207ENST00000556303 CFAP70Q5T0N1 1121 aa18.45■□□□□ 0.54
SNX6-207ENST00000556303 WAPLQ7Z5K2 1190 aa18.45■□□□□ 0.54
SNX6-207ENST00000556303 SOS2Q07890 1332 aaPredicted RBP18.45■□□□□ 0.54
SNX6-207ENST00000556303 MEX3CQ5U5Q3 659 aaKnown RBP18.44■□□□□ 0.54
SNX6-207ENST00000556303 ZNF772Q68DY9 489 aaPredicted RBP18.44■□□□□ 0.54
SNX6-207ENST00000556303 ORAI2Q96SN7 254 aa18.44■□□□□ 0.54
SNX6-207ENST00000556303 POTEAQ6S8J7 498 aa18.43■□□□□ 0.54
SNX6-207ENST00000556303 NPHP3Q7Z494 1330 aa18.42■□□□□ 0.54
SNX6-207ENST00000556303 LRP6O75581 1613 aa18.41■□□□□ 0.54
SNX6-207ENST00000556303 ESCO1Q5FWF5 840 aa18.41■□□□□ 0.54
SNX6-207ENST00000556303 DCAF11Q8TEB1 546 aa18.41■□□□□ 0.54
SNX6-207ENST00000556303 DDX17Q92841 729 aaKnown RBP18.4■□□□□ 0.54
SNX6-207ENST00000556303 PNPLA6Q8IY17 1366 aa18.4■□□□□ 0.54
SNX6-207ENST00000556303 PLEKHH1Q9ULM0 1364 aa18.39■□□□□ 0.53
SNX6-207ENST00000556303 DLC1Q96QB1 1528 aa18.39■□□□□ 0.53
SNX6-207ENST00000556303 NUTM2BA6NNL0 878 aaPredicted RBP18.37■□□□□ 0.53
SNX6-207ENST00000556303 NUTM2EB1AL46 878 aaPredicted RBP18.37■□□□□ 0.53
SNX6-207ENST00000556303 NUTM2AQ8IVF1 878 aaPredicted RBP18.37■□□□□ 0.53
SNX6-207ENST00000556303 KDM2AQ9Y2K7 1162 aa18.37■□□□□ 0.53
SNX6-207ENST00000556303 PRAM1Q96QH2 718 aa18.36■□□□□ 0.53
SNX6-207ENST00000556303 ADGRB1O14514 1584 aa18.35■□□□□ 0.53
SNX6-207ENST00000556303 POGKQ9P215 609 aa18.35■□□□□ 0.53
SNX6-207ENST00000556303 FOXO3O43524 673 aa18.33■□□□□ 0.52
SNX6-207ENST00000556303 FMN2Q9NZ56 1722 aa18.32■□□□□ 0.52
SNX6-207ENST00000556303 AFF2P51816 1311 aa18.31■□□□□ 0.52
SNX6-207ENST00000556303 TRAK1Q9UPV9 953 aa18.31■□□□□ 0.52
SNX6-207ENST00000556303 PXDNQ92626 1479 aa18.31■□□□□ 0.52
SNX6-207ENST00000556303 NUTM2FA1L443 756 aa18.3■□□□□ 0.52
SNX6-207ENST00000556303 RXRBP28702 533 aa18.3■□□□□ 0.52
SNX6-207ENST00000556303 EIF3AQ14152 1382 aaKnown RBP18.3■□□□□ 0.52
SNX6-207ENST00000556303 KIF1AQ12756 1690 aa18.29■□□□□ 0.52
SNX6-207ENST00000556303 PSME1Q06323 249 aa18.29■□□□□ 0.52
SNX6-207ENST00000556303 C8orf37Q96NL8 207 aa18.29■□□□□ 0.52
SNX6-207ENST00000556303 PHF8Q9UPP1 1060 aa18.29■□□□□ 0.52
SNX6-207ENST00000556303 COL22A1Q8NFW1 1626 aaPredicted RBP18.29■□□□□ 0.52
SNX6-207ENST00000556303 ANKARQ7Z5J8 1434 aa18.29■□□□□ 0.52
SNX6-207ENST00000556303 ADGRB2O60241 1585 aa18.27■□□□□ 0.52
SNX6-207ENST00000556303 SAFB2Q14151 953 aaKnown RBP eCLIP18.27■□□□□ 0.52
SNX6-207ENST00000556303 NGLY1Q96IV0 654 aa18.27■□□□□ 0.52
SNX6-207ENST00000556303 CDK12Q9NYV4 1490 aaPredicted RBP18.26■□□□□ 0.51
SNX6-207ENST00000556303 KRT28Q7Z3Y7 464 aa18.26■□□□□ 0.51
SNX6-207ENST00000556303 SPATA31A3Q5VYP0 1347 aa18.25■□□□□ 0.51
SNX6-207ENST00000556303 ADAMTS2O95450 1211 aa18.25■□□□□ 0.51
SNX6-207ENST00000556303 FNBP4Q8N3X1 1017 aaPredicted RBP18.25■□□□□ 0.51
SNX6-207ENST00000556303 QTRT2Q9H974 415 aaKnown RBP18.25■□□□□ 0.51
SNX6-207ENST00000556303 KIAA1210Q9ULL0 1709 aa18.24■□□□□ 0.51
SNX6-207ENST00000556303 WASLO00401 505 aaPredicted RBP18.24■□□□□ 0.51
SNX6-207ENST00000556303 RBM6P78332 1123 aaKnown RBP18.24■□□□□ 0.51
SNX6-207ENST00000556303 SBNO1A3KN83 1393 aa18.24■□□□□ 0.51
SNX6-207ENST00000556303 XPCQ01831 940 aaPredicted RBP18.23■□□□□ 0.51
SNX6-207ENST00000556303 MINK1Q8N4C8 1332 aaPredicted RBP18.22■□□□□ 0.51
SNX6-207ENST00000556303 USP21Q9UK80 565 aa18.21■□□□□ 0.51
SNX6-207ENST00000556303 TRPC5Q9UL62 973 aaPredicted RBP18.21■□□□□ 0.51
SNX6-207ENST00000556303 RGPD8O14715 1765 aaPredicted RBP18.2■□□□□ 0.5
SNX6-207ENST00000556303 HIRIP3Q9BW71 556 aaPredicted RBP18.2■□□□□ 0.5
SNX6-207ENST00000556303 TNS3Q68CZ2 1445 aa18.2■□□□□ 0.5
SNX6-207ENST00000556303 ARHGEF10O15013 1369 aa18.19■□□□□ 0.5
SNX6-207ENST00000556303 TULP4Q9NRJ4 1543 aa18.19■□□□□ 0.5
SNX6-207ENST00000556303 PMFBP1Q8TBY8 1022 aa18.17■□□□□ 0.5
SNX6-207ENST00000556303 ARHGEF28Q8N1W1 1705 aaKnown RBP18.17■□□□□ 0.5
SNX6-207ENST00000556303 GPRASP1Q5JY77 1395 aa18.17■□□□□ 0.5
SNX6-207ENST00000556303 USP32Q8NFA0 1604 aa18.16■□□□□ 0.5
SNX6-207ENST00000556303 NBPF1Q3BBV0 1214 aa18.16■□□□□ 0.5
SNX6-207ENST00000556303 L3MBTL2Q969R5 705 aa18.16■□□□□ 0.5
SNX6-207ENST00000556303 PRR36Q9H6K5 1346 aa18.16■□□□□ 0.5
SNX6-207ENST00000556303 ATRNO75882 1429 aa18.15■□□□□ 0.5
SNX6-207ENST00000556303 MARF1Q9Y4F3 1742 aaKnown RBP18.14■□□□□ 0.49
SNX6-207ENST00000556303 BCL9LQ86UU0 1499 aa18.14■□□□□ 0.49
SNX6-207ENST00000556303 NGDNQ8NEJ9 315 aaKnown RBP18.13■□□□□ 0.49
SNX6-207ENST00000556303 NUDT16Q96DE0 195 aaKnown RBP18.13■□□□□ 0.49
SNX6-207ENST00000556303 CDK19Q9BWU1 502 aa18.13■□□□□ 0.49
SNX6-207ENST00000556303 HAP1P54257 671 aaPredicted RBP18.12■□□□□ 0.49
SNX6-207ENST00000556303 UNC5CLQ8IV45 518 aa18.12■□□□□ 0.49
SNX6-207ENST00000556303 UPF1Q92900 1129 aaKnown RBP eCLIP18.12■□□□□ 0.49
SNX6-207ENST00000556303 SIN3AQ96ST3 1273 aa18.12■□□□□ 0.49
SNX6-207ENST00000556303 CCDC61Q9Y6R9 512 aa18.12■□□□□ 0.49
SNX6-207ENST00000556303 LMOD2Q6P5Q4 547 aa18.11■□□□□ 0.49
SNX6-207ENST00000556303 CENPJQ9HC77 1338 aaPredicted RBP18.11■□□□□ 0.49
SNX6-207ENST00000556303 SLIT2O94813 1529 aa18.11■□□□□ 0.49
SNX6-207ENST00000556303 ATP7BP35670 1465 aa18.1■□□□□ 0.49
SNX6-207ENST00000556303 RGS12O14924 1447 aa18.1■□□□□ 0.49
SNX6-207ENST00000556303 PLEKHG3A1L390 1219 aa18.1■□□□□ 0.49
SNX6-207ENST00000556303 TRIM26Q12899 539 aaPredicted RBP18.09■□□□□ 0.49
SNX6-207ENST00000556303 NEUROD1Q13562 356 aa18.09■□□□□ 0.49
SNX6-207ENST00000556303 GJD4Q96KN9 370 aaPredicted RBP18.09■□□□□ 0.49
SNX6-207ENST00000556303 ITSN1Q15811 1721 aa18.09■□□□□ 0.49
SNX6-207ENST00000556303 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.08■□□□□ 0.48
SNX6-207ENST00000556303 POLR3AO14802 1390 aaPredicted RBP18.07■□□□□ 0.48
SNX6-207ENST00000556303 TRPM3Q9HCF6 1732 aaPredicted RBP18.07■□□□□ 0.48
SNX6-207ENST00000556303 CABLES1Q8TDN4 633 aa18.07■□□□□ 0.48
SNX6-207ENST00000556303 EP400Q96L91 3159 aa18.05■□□□□ 0.48
SNX6-207ENST00000556303 NBPF8Q3BBV2 869 aa18.05■□□□□ 0.48
SNX6-207ENST00000556303 ALS2Q96Q42 1657 aa18.05■□□□□ 0.48
SNX6-207ENST00000556303 PAK3O75914 559 aaPredicted RBP18.04■□□□□ 0.48
SNX6-207ENST00000556303 VPS72Q15906 364 aa18.04■□□□□ 0.48
SNX6-207ENST00000556303 BRD4O60885 1362 aaPredicted RBP18.04■□□□□ 0.48
SNX6-207ENST00000556303 ROCK2O75116 1388 aaKnown RBP18.04■□□□□ 0.48
SNX6-207ENST00000556303 ATAD2Q6PL18 1390 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms