RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 SYMPKQ92797 1274 aaKnown RBP12.68□□□□□ -0.38
LINC00871-202ENST00000556071 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.68□□□□□ -0.38
LINC00871-202ENST00000556071 TLL1O43897 1013 aa12.67□□□□□ -0.38
LINC00871-202ENST00000556071 QPCTQ16769 361 aa12.67□□□□□ -0.38
LINC00871-202ENST00000556071 TUSC1Q2TAM9 212 aa12.67□□□□□ -0.38
LINC00871-202ENST00000556071 THAP11Q96EK4 314 aa12.67□□□□□ -0.38
LINC00871-202ENST00000556071 PLA2G2EQ9NZK7 142 aa12.67□□□□□ -0.38
LINC00871-202ENST00000556071 Q3C1V9 767 aa12.66□□□□□ -0.38
LINC00871-202ENST00000556071 CABLES1Q8TDN4 633 aa12.66□□□□□ -0.38
LINC00871-202ENST00000556071 C6orf229H3BNL8 230 aa12.65□□□□□ -0.38
LINC00871-202ENST00000556071 KCNC4Q03721 635 aa12.65□□□□□ -0.38
LINC00871-202ENST00000556071 BRICD5Q6PL45 260 aa12.65□□□□□ -0.38
LINC00871-202ENST00000556071 SALL2Q9Y467 1007 aaPredicted RBP12.65□□□□□ -0.38
LINC00871-202ENST00000556071 FMNL1O95466 1100 aaPredicted RBP12.64□□□□□ -0.39
LINC00871-202ENST00000556071 HRCP23327 699 aa12.64□□□□□ -0.39
LINC00871-202ENST00000556071 FBXO31Q5XUX0 539 aaPredicted RBP12.64□□□□□ -0.39
LINC00871-202ENST00000556071 LILRB3O75022 631 aa12.63□□□□□ -0.39
LINC00871-202ENST00000556071 MTMR2Q13614 643 aa12.63□□□□□ -0.39
LINC00871-202ENST00000556071 PRPF38BQ5VTL8 546 aaKnown RBP12.63□□□□□ -0.39
LINC00871-202ENST00000556071 NKX2-3Q8TAU0 364 aa12.63□□□□□ -0.39
LINC00871-202ENST00000556071 ZBTB3Q9H5J0 574 aa12.63□□□□□ -0.39
LINC00871-202ENST00000556071 SPSB2Q99619 263 aa12.62□□□□□ -0.39
LINC00871-202ENST00000556071 ADH1BP00325 375 aa12.61□□□□□ -0.39
LINC00871-202ENST00000556071 NUTM2BA6NNL0 878 aaPredicted RBP12.6□□□□□ -0.39
LINC00871-202ENST00000556071 NUTM2EB1AL46 878 aaPredicted RBP12.6□□□□□ -0.39
LINC00871-202ENST00000556071 RTL5Q5HYW3 569 aaPredicted RBP12.6□□□□□ -0.39
LINC00871-202ENST00000556071 NUTM2DQ5VT03 806 aaPredicted RBP12.6□□□□□ -0.39
LINC00871-202ENST00000556071 RETREG3Q86VR2 466 aa12.6□□□□□ -0.39
LINC00871-202ENST00000556071 NUTM2AQ8IVF1 878 aaPredicted RBP12.6□□□□□ -0.39
LINC00871-202ENST00000556071 USB1Q9BQ65 265 aaKnown RBP12.6□□□□□ -0.39
LINC00871-202ENST00000556071 SPDYE5A6NIY4 337 aa12.58□□□□□ -0.4
LINC00871-202ENST00000556071 FAM160A2Q8N612 972 aaPredicted RBP12.58□□□□□ -0.4
LINC00871-202ENST00000556071 PPP2R2DQ66LE6 453 aa12.57□□□□□ -0.4
LINC00871-202ENST00000556071 CFAP99D6REC4 459 aa12.56□□□□□ -0.4
LINC00871-202ENST00000556071 PRR7Q8TB68 274 aa12.56□□□□□ -0.4
LINC00871-202ENST00000556071 PRDM9Q9NQV7 894 aa12.56□□□□□ -0.4
LINC00871-202ENST00000556071 RFC5P40937 340 aa12.54□□□□□ -0.4
LINC00871-202ENST00000556071 MSS51Q4VC12 460 aa12.54□□□□□ -0.4
LINC00871-202ENST00000556071 SLC6A16Q9GZN6 736 aa12.53□□□□□ -0.4
LINC00871-202ENST00000556071 S1PR4O95977 384 aa12.52□□□□□ -0.41
LINC00871-202ENST00000556071 TSC1Q92574 1164 aa12.52□□□□□ -0.41
LINC00871-202ENST00000556071 IFFO2Q5TF58 517 aa12.51□□□□□ -0.41
LINC00871-202ENST00000556071 JUNDP17535 347 aa12.49□□□□□ -0.41
LINC00871-202ENST00000556071 DXOO77932 396 aaKnown RBP12.48□□□□□ -0.41
LINC00871-202ENST00000556071 MMP16P51512 607 aa12.48□□□□□ -0.41
LINC00871-202ENST00000556071 AP1G2O75843 785 aa12.47□□□□□ -0.41
LINC00871-202ENST00000556071 DESI1Q6ICB0 168 aa12.47□□□□□ -0.41
LINC00871-202ENST00000556071 PPP1R18Q6NYC8 613 aa12.47□□□□□ -0.41
LINC00871-202ENST00000556071 HELBQ8NG08 1087 aaPredicted RBP12.47□□□□□ -0.41
LINC00871-202ENST00000556071 PER1O15534 1290 aaPredicted RBP12.45□□□□□ -0.42
LINC00871-202ENST00000556071 CTDSPL2Q05D32 466 aa12.45□□□□□ -0.42
LINC00871-202ENST00000556071 RNF223E7ERA6 249 aa12.44□□□□□ -0.42
LINC00871-202ENST00000556071 PPEF1O14829 653 aaPredicted RBP12.44□□□□□ -0.42
LINC00871-202ENST00000556071 TMEM259Q4ZIN3 620 aa12.44□□□□□ -0.42
LINC00871-202ENST00000556071 GGCXP38435 758 aa12.43□□□□□ -0.42
LINC00871-202ENST00000556071 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.43□□□□□ -0.42
LINC00871-202ENST00000556071 USP17L8P0C7I0 530 aa12.42□□□□□ -0.42
LINC00871-202ENST00000556071 LYPD8Q6UX82 237 aa12.42□□□□□ -0.42
LINC00871-202ENST00000556071 FCF1Q9Y324 198 aaKnown RBP12.42□□□□□ -0.42
LINC00871-202ENST00000556071 A0A0G2JS52 829 aa12.41□□□□□ -0.42
LINC00871-202ENST00000556071 PTPRNQ16849 979 aa12.41□□□□□ -0.42
LINC00871-202ENST00000556071 LRRN4Q8WUT4 740 aa12.4□□□□□ -0.42
LINC00871-202ENST00000556071 NUDT12Q9BQG2 462 aa12.4□□□□□ -0.42
LINC00871-202ENST00000556071 CCNYL3P0C7X3 344 aa12.38□□□□□ -0.43
LINC00871-202ENST00000556071 CCDC24Q8N4L8 307 aa12.38□□□□□ -0.43
LINC00871-202ENST00000556071 ANKLE1Q8NAG6 615 aa12.38□□□□□ -0.43
LINC00871-202ENST00000556071 BANK1Q8NDB2 785 aa12.38□□□□□ -0.43
LINC00871-202ENST00000556071 HMX1Q9NP08 348 aaPredicted RBP12.37□□□□□ -0.43
LINC00871-202ENST00000556071 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
LINC00871-202ENST00000556071 GTF3C3Q9Y5Q9 886 aa12.37□□□□□ -0.43
LINC00871-202ENST00000556071 PLA2G2CQ5R387 149 aa12.36□□□□□ -0.43
LINC00871-202ENST00000556071 MAP10Q9P2G4 905 aa12.35□□□□□ -0.43
LINC00871-202ENST00000556071 F12P00748 615 aaPredicted RBP12.34□□□□□ -0.43
LINC00871-202ENST00000556071 EVA1BQ9NVM1 165 aa12.34□□□□□ -0.43
LINC00871-202ENST00000556071 MCM6Q14566 821 aa12.33□□□□□ -0.44
LINC00871-202ENST00000556071 MTMR14Q8NCE2 650 aa12.33□□□□□ -0.44
LINC00871-202ENST00000556071 RGS20O76081 388 aa12.32□□□□□ -0.44
LINC00871-202ENST00000556071 CTHP32929 405 aa12.32□□□□□ -0.44
LINC00871-202ENST00000556071 KCNH2Q12809 1159 aa12.32□□□□□ -0.44
LINC00871-202ENST00000556071 PTCRAQ6ISU1 281 aaPredicted RBP12.32□□□□□ -0.44
LINC00871-202ENST00000556071 EPS8L1Q8TE68 723 aa12.31□□□□□ -0.44
LINC00871-202ENST00000556071 NR6A1Q15406 480 aa12.3□□□□□ -0.44
LINC00871-202ENST00000556071 EMID1Q96A84 441 aaPredicted RBP12.29□□□□□ -0.44
LINC00871-202ENST00000556071 GJD4Q96KN9 370 aaPredicted RBP12.29□□□□□ -0.44
LINC00871-202ENST00000556071 TRIM34Q9BYJ4 488 aa12.29□□□□□ -0.44
LINC00871-202ENST00000556071 FLIIQ13045 1269 aa12.28□□□□□ -0.44
LINC00871-202ENST00000556071 UNC93B1Q9H1C4 597 aa12.28□□□□□ -0.44
LINC00871-202ENST00000556071 SOCS7O14512 581 aa12.26□□□□□ -0.45
LINC00871-202ENST00000556071 LIAT1Q6ZQX7 453 aa12.26□□□□□ -0.45
LINC00871-202ENST00000556071 ZBTB24O43167 697 aaPredicted RBP12.25□□□□□ -0.45
LINC00871-202ENST00000556071 IRX2Q9BZI1 471 aaPredicted RBP12.24□□□□□ -0.45
LINC00871-202ENST00000556071 SLC19A1P41440 591 aa12.23□□□□□ -0.45
LINC00871-202ENST00000556071 PRKD2Q9BZL6 878 aa12.23□□□□□ -0.45
LINC00871-202ENST00000556071 APBB1O00213 710 aa12.22□□□□□ -0.45
LINC00871-202ENST00000556071 RPIAP49247 311 aa12.22□□□□□ -0.45
LINC00871-202ENST00000556071 TRIM32Q13049 653 aa12.22□□□□□ -0.45
LINC00871-202ENST00000556071 LINC01559Q495D7 138 aa12.2□□□□□ -0.46
LINC00871-202ENST00000556071 BAP1Q92560 729 aa12.2□□□□□ -0.46
LINC00871-202ENST00000556071 FKBPLQ9UIM3 349 aa12.2□□□□□ -0.46
LINC00871-202ENST00000556071 TBC1D2BQ9UPU7 963 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms