RNA–Protein interactions for RNA: ENST00000556020.1

GPHN-211, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-211ENST00000556020 YTHDC2Q9H6S0 1430 aaKnown RBP25.27■■□□□ 1.64
GPHN-211ENST00000556020 MYOM2P54296 1465 aa25.27■■□□□ 1.64
GPHN-211ENST00000556020 CDC42BPGQ6DT37 1551 aa25.27■■□□□ 1.64
GPHN-211ENST00000556020 PLEKHH1Q9ULM0 1364 aa25.26■■□□□ 1.63
GPHN-211ENST00000556020 CFAP70Q5T0N1 1121 aa25.25■■□□□ 1.63
GPHN-211ENST00000556020 ABCC11Q96J66 1382 aa25.25■■□□□ 1.63
GPHN-211ENST00000556020 LAMC1P11047 1609 aa25.25■■□□□ 1.63
GPHN-211ENST00000556020 NRXN1Q9ULB1 1477 aa25.24■■□□□ 1.63
GPHN-211ENST00000556020 C14orf93Q9H972 538 aaKnown RBP25.24■■□□□ 1.63
GPHN-211ENST00000556020 NUTM2FA1L443 756 aa25.23■■□□□ 1.63
GPHN-211ENST00000556020 ESCO1Q5FWF5 840 aa25.22■■□□□ 1.63
GPHN-211ENST00000556020 PNPLA6Q8IY17 1366 aa25.21■■□□□ 1.63
GPHN-211ENST00000556020 HRCP23327 699 aa25.21■■□□□ 1.63
GPHN-211ENST00000556020 KDM2AQ9Y2K7 1162 aa25.2■■□□□ 1.62
GPHN-211ENST00000556020 DHX57Q6P158 1386 aaKnown RBP25.19■■□□□ 1.62
GPHN-211ENST00000556020 ZNF772Q68DY9 489 aaPredicted RBP25.17■■□□□ 1.62
GPHN-211ENST00000556020 DCAF11Q8TEB1 546 aa25.17■■□□□ 1.62
GPHN-211ENST00000556020 FMN2Q9NZ56 1722 aa25.17■■□□□ 1.62
GPHN-211ENST00000556020 SOS2Q07890 1332 aaPredicted RBP25.16■■□□□ 1.62
GPHN-211ENST00000556020 SAFB2Q14151 953 aaKnown RBP eCLIP25.16■■□□□ 1.62
GPHN-211ENST00000556020 XPCQ01831 940 aaPredicted RBP25.14■■□□□ 1.62
GPHN-211ENST00000556020 C8orf37Q96NL8 207 aa25.13■■□□□ 1.61
GPHN-211ENST00000556020 PRAM1Q96QH2 718 aa25.13■■□□□ 1.61
GPHN-211ENST00000556020 AFF2P51816 1311 aa25.12■■□□□ 1.61
GPHN-211ENST00000556020 NPHP3Q7Z494 1330 aa25.12■■□□□ 1.61
GPHN-211ENST00000556020 FOXO3O43524 673 aa25.12■■□□□ 1.61
GPHN-211ENST00000556020 ADAMTS2O95450 1211 aa25.12■■□□□ 1.61
GPHN-211ENST00000556020 SIRT1Q96EB6 747 aa25.11■■□□□ 1.61
GPHN-211ENST00000556020 POGKQ9P215 609 aa25.11■■□□□ 1.61
GPHN-211ENST00000556020 RGPD8O14715 1765 aaPredicted RBP25.1■■□□□ 1.61
GPHN-211ENST00000556020 ADGRB1O14514 1584 aa25.1■■□□□ 1.61
GPHN-211ENST00000556020 PXDNQ92626 1479 aa25.09■■□□□ 1.61
GPHN-211ENST00000556020 TRAK1Q9UPV9 953 aa25.08■■□□□ 1.61
GPHN-211ENST00000556020 DLC1Q96QB1 1528 aa25.07■■□□□ 1.6
GPHN-211ENST00000556020 KIF1AQ12756 1690 aa25.07■■□□□ 1.6
GPHN-211ENST00000556020 COL22A1Q8NFW1 1626 aaPredicted RBP25.05■■□□□ 1.6
GPHN-211ENST00000556020 NGLY1Q96IV0 654 aa25.05■■□□□ 1.6
GPHN-211ENST00000556020 RXRBP28702 533 aa25.04■■□□□ 1.6
GPHN-211ENST00000556020 HIRIP3Q9BW71 556 aaPredicted RBP25.02■■□□□ 1.6
GPHN-211ENST00000556020 STAC3Q96MF2 364 aa25.01■■□□□ 1.59
GPHN-211ENST00000556020 PHF8Q9UPP1 1060 aa25■■□□□ 1.59
GPHN-211ENST00000556020 MINK1Q8N4C8 1332 aaPredicted RBP25■■□□□ 1.59
GPHN-211ENST00000556020 KRT28Q7Z3Y7 464 aa24.99■■□□□ 1.59
GPHN-211ENST00000556020 QTRT2Q9H974 415 aaKnown RBP24.99■■□□□ 1.59
GPHN-211ENST00000556020 USP32Q8NFA0 1604 aa24.98■■□□□ 1.59
GPHN-211ENST00000556020 ADGRB2O60241 1585 aa24.98■■□□□ 1.59
GPHN-211ENST00000556020 ARHGEF28Q8N1W1 1705 aaKnown RBP24.96■■□□□ 1.59
GPHN-211ENST00000556020 MARF1Q9Y4F3 1742 aaKnown RBP24.96■■□□□ 1.59
GPHN-211ENST00000556020 PLEKHG5O94827 1062 aa24.96■■□□□ 1.59
GPHN-211ENST00000556020 PMFBP1Q8TBY8 1022 aa24.95■■□□□ 1.58
GPHN-211ENST00000556020 USP21Q9UK80 565 aa24.95■■□□□ 1.58
GPHN-211ENST00000556020 SPATA31A3Q5VYP0 1347 aa24.94■■□□□ 1.58
GPHN-211ENST00000556020 ANKARQ7Z5J8 1434 aa24.93■■□□□ 1.58
GPHN-211ENST00000556020 RBM6P78332 1123 aaKnown RBP24.92■■□□□ 1.58
GPHN-211ENST00000556020 PSME1Q06323 249 aa24.92■■□□□ 1.58
GPHN-211ENST00000556020 LMOD2Q6P5Q4 547 aa24.92■■□□□ 1.58
GPHN-211ENST00000556020 CDK12Q9NYV4 1490 aaPredicted RBP24.91■■□□□ 1.58
GPHN-211ENST00000556020 KIAA1210Q9ULL0 1709 aa24.9■■□□□ 1.58
GPHN-211ENST00000556020 TNS3Q68CZ2 1445 aa24.9■■□□□ 1.58
GPHN-211ENST00000556020 RGS12O14924 1447 aa24.89■■□□□ 1.58
GPHN-211ENST00000556020 WASLO00401 505 aaPredicted RBP24.89■■□□□ 1.58
GPHN-211ENST00000556020 HAP1P54257 671 aaPredicted RBP24.89■■□□□ 1.58
GPHN-211ENST00000556020 TULP4Q9NRJ4 1543 aa24.89■■□□□ 1.57
GPHN-211ENST00000556020 EIF3AQ14152 1382 aaKnown RBP24.89■■□□□ 1.57
GPHN-211ENST00000556020 PRR36Q9H6K5 1346 aa24.88■■□□□ 1.57
GPHN-211ENST00000556020 FNBP4Q8N3X1 1017 aaPredicted RBP24.88■■□□□ 1.57
GPHN-211ENST00000556020 TRPC5Q9UL62 973 aaPredicted RBP24.87■■□□□ 1.57
GPHN-211ENST00000556020 NBPF1Q3BBV0 1214 aa24.86■■□□□ 1.57
GPHN-211ENST00000556020 CABLES1Q8TDN4 633 aa24.86■■□□□ 1.57
GPHN-211ENST00000556020 SBNO1A3KN83 1393 aa24.85■■□□□ 1.57
GPHN-211ENST00000556020 SIN3AQ96ST3 1273 aa24.85■■□□□ 1.57
GPHN-211ENST00000556020 UPF1Q92900 1129 aaKnown RBP eCLIP24.84■■□□□ 1.571e-6■■■■■ 27.9
GPHN-211ENST00000556020 ATRNO75882 1429 aa24.83■■□□□ 1.57
GPHN-211ENST00000556020 BCL9LQ86UU0 1499 aa24.83■■□□□ 1.56
GPHN-211ENST00000556020 GPRASP1Q5JY77 1395 aa24.82■■□□□ 1.56
GPHN-211ENST00000556020 NEUROD1Q13562 356 aa24.82■■□□□ 1.56
GPHN-211ENST00000556020 ITSN1Q15811 1721 aa24.82■■□□□ 1.56
GPHN-211ENST00000556020 ABCA3Q99758 1704 aa24.82■■□□□ 1.56
GPHN-211ENST00000556020 TRPM3Q9HCF6 1732 aaPredicted RBP24.82■■□□□ 1.56
GPHN-211ENST00000556020 ARHGEF10O15013 1369 aa24.81■■□□□ 1.56
GPHN-211ENST00000556020 NGDNQ8NEJ9 315 aaKnown RBP24.81■■□□□ 1.56
GPHN-211ENST00000556020 L3MBTL2Q969R5 705 aa24.81■■□□□ 1.56
GPHN-211ENST00000556020 NUDT16Q96DE0 195 aaKnown RBP24.79■■□□□ 1.56
GPHN-211ENST00000556020 CDK19Q9BWU1 502 aa24.79■■□□□ 1.56
GPHN-211ENST00000556020 ATP7BP35670 1465 aa24.78■■□□□ 1.56
GPHN-211ENST00000556020 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.78■■□□□ 1.56
GPHN-211ENST00000556020 PAK3O75914 559 aaPredicted RBP24.77■■□□□ 1.56
GPHN-211ENST00000556020 PLCH1Q4KWH8 1693 aa24.76■■□□□ 1.55
GPHN-211ENST00000556020 ALS2Q96Q42 1657 aa24.76■■□□□ 1.55
GPHN-211ENST00000556020 SLIT2O94813 1529 aa24.76■■□□□ 1.55
GPHN-211ENST00000556020 UNC5CLQ8IV45 518 aa24.75■■□□□ 1.55
GPHN-211ENST00000556020 GJD4Q96KN9 370 aaPredicted RBP24.74■■□□□ 1.55
GPHN-211ENST00000556020 TOPAZ1Q8N9V7 1692 aa24.72■■□□□ 1.55
GPHN-211ENST00000556020 QRICH2Q9H0J4 1663 aa24.72■■□□□ 1.55
GPHN-211ENST00000556020 CENPJQ9HC77 1338 aaPredicted RBP24.72■■□□□ 1.55
GPHN-211ENST00000556020 TRPM1Q7Z4N2 1603 aa24.71■■□□□ 1.55
GPHN-211ENST00000556020 GLI3P10071 1580 aa24.7■■□□□ 1.54
GPHN-211ENST00000556020 RALGAPBQ86X10 1494 aa24.7■■□□□ 1.54
GPHN-211ENST00000556020 NWD2Q9ULI1 1742 aa24.69■■□□□ 1.54
GPHN-211ENST00000556020 ATAD2Q6PL18 1390 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms