RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 QTRT2Q9H974 415 aaKnown RBP21.66■■□□□ 1.06
CHMP4BP1-201ENST00000556017 PXDNQ92626 1479 aa21.65■■□□□ 1.06
CHMP4BP1-201ENST00000556017 KNDC1Q76NI1 1749 aa21.65■■□□□ 1.06
CHMP4BP1-201ENST00000556017 MYOM2P54296 1465 aa21.64■■□□□ 1.05
CHMP4BP1-201ENST00000556017 ADAMTS2O95450 1211 aa21.63■■□□□ 1.05
CHMP4BP1-201ENST00000556017 RBM6P78332 1123 aaKnown RBP21.63■■□□□ 1.05
CHMP4BP1-201ENST00000556017 MARF1Q9Y4F3 1742 aaKnown RBP21.62■■□□□ 1.05
CHMP4BP1-201ENST00000556017 CCDC144AA2RUR9 1427 aa21.61■■□□□ 1.05
CHMP4BP1-201ENST00000556017 PLEKHH1Q9ULM0 1364 aa21.61■■□□□ 1.05
CHMP4BP1-201ENST00000556017 WAPLQ7Z5K2 1190 aa21.6■■□□□ 1.05
CHMP4BP1-201ENST00000556017 PIK3C2GO75747 1445 aa21.6■■□□□ 1.05
CHMP4BP1-201ENST00000556017 FMN2Q9NZ56 1722 aa21.6■■□□□ 1.05
CHMP4BP1-201ENST00000556017 LRPPRCP42704 1394 aaKnown RBP21.6■■□□□ 1.05
CHMP4BP1-201ENST00000556017 FNBP4Q8N3X1 1017 aaPredicted RBP21.59■■□□□ 1.05
CHMP4BP1-201ENST00000556017 NGLY1Q96IV0 654 aa21.59■■□□□ 1.05
CHMP4BP1-201ENST00000556017 MPHOSPH9Q99550 1183 aa21.59■■□□□ 1.05
CHMP4BP1-201ENST00000556017 ABCC11Q96J66 1382 aa21.59■■□□□ 1.05
CHMP4BP1-201ENST00000556017 RGL3Q3MIN7 710 aa21.58■■□□□ 1.05
CHMP4BP1-201ENST00000556017 ANKRD30BQ9BXX2 1392 aa21.58■■□□□ 1.04
CHMP4BP1-201ENST00000556017 EP400Q96L91 3159 aa21.58■■□□□ 1.04
CHMP4BP1-201ENST00000556017 ATRNO75882 1429 aa21.57■■□□□ 1.04
CHMP4BP1-201ENST00000556017 TMEM132EQ6IEE7 984 aa21.57■■□□□ 1.04
CHMP4BP1-201ENST00000556017 BCL9LQ86UU0 1499 aa21.56■■□□□ 1.04
CHMP4BP1-201ENST00000556017 RGPD8O14715 1765 aaPredicted RBP21.56■■□□□ 1.04
CHMP4BP1-201ENST00000556017 ESCO1Q5FWF5 840 aa21.55■■□□□ 1.04
CHMP4BP1-201ENST00000556017 NPHP3Q7Z494 1330 aa21.55■■□□□ 1.04
CHMP4BP1-201ENST00000556017 NRXN1Q9ULB1 1477 aa21.54■■□□□ 1.04
CHMP4BP1-201ENST00000556017 FOXO3O43524 673 aa21.54■■□□□ 1.04
CHMP4BP1-201ENST00000556017 XPCQ01831 940 aaPredicted RBP21.54■■□□□ 1.04
CHMP4BP1-201ENST00000556017 STK26Q9P289 416 aa21.54■■□□□ 1.04
CHMP4BP1-201ENST00000556017 USP21Q9UK80 565 aa21.54■■□□□ 1.04
CHMP4BP1-201ENST00000556017 YTHDC2Q9H6S0 1430 aaKnown RBP21.53■■□□□ 1.04
CHMP4BP1-201ENST00000556017 NUTM2FA1L443 756 aa21.52■■□□□ 1.04
CHMP4BP1-201ENST00000556017 SRCAPQ6ZRS2 3230 aa21.52■■□□□ 1.04
CHMP4BP1-201ENST00000556017 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.5■■□□□ 1.03
CHMP4BP1-201ENST00000556017 TRPC5Q9UL62 973 aaPredicted RBP21.5■■□□□ 1.03
CHMP4BP1-201ENST00000556017 KIF1AQ12756 1690 aa21.5■■□□□ 1.03
CHMP4BP1-201ENST00000556017 C14orf93Q9H972 538 aaKnown RBP21.47■■□□□ 1.03
CHMP4BP1-201ENST00000556017 SIRT1Q96EB6 747 aa21.46■■□□□ 1.03
CHMP4BP1-201ENST00000556017 SPATA31A3Q5VYP0 1347 aa21.46■■□□□ 1.03
CHMP4BP1-201ENST00000556017 SLIT2O94813 1529 aa21.45■■□□□ 1.02
CHMP4BP1-201ENST00000556017 GLI3P10071 1580 aa21.45■■□□□ 1.02
CHMP4BP1-201ENST00000556017 USP32Q8NFA0 1604 aa21.45■■□□□ 1.02
CHMP4BP1-201ENST00000556017 ABCA3Q99758 1704 aa21.44■■□□□ 1.02
CHMP4BP1-201ENST00000556017 CFAP70Q5T0N1 1121 aa21.44■■□□□ 1.02
CHMP4BP1-201ENST00000556017 ATAD2Q6PL18 1390 aa21.44■■□□□ 1.02
CHMP4BP1-201ENST00000556017 ADGRB1O14514 1584 aa21.42■■□□□ 1.02
CHMP4BP1-201ENST00000556017 BRWD3Q6RI45 1802 aa21.41■■□□□ 1.02
CHMP4BP1-201ENST00000556017 GJD4Q96KN9 370 aaPredicted RBP21.4■■□□□ 1.02
CHMP4BP1-201ENST00000556017 DLC1Q96QB1 1528 aa21.39■■□□□ 1.02
CHMP4BP1-201ENST00000556017 KRT28Q7Z3Y7 464 aa21.39■■□□□ 1.01
CHMP4BP1-201ENST00000556017 RALGAPBQ86X10 1494 aa21.39■■□□□ 1.01
CHMP4BP1-201ENST00000556017 TNS3Q68CZ2 1445 aa21.38■■□□□ 1.01
CHMP4BP1-201ENST00000556017 PLCH1Q4KWH8 1693 aa21.38■■□□□ 1.01
CHMP4BP1-201ENST00000556017 ADGRB2O60241 1585 aa21.38■■□□□ 1.01
CHMP4BP1-201ENST00000556017 TRPM3Q9HCF6 1732 aaPredicted RBP21.37■■□□□ 1.01
CHMP4BP1-201ENST00000556017 DHX57Q6P158 1386 aaKnown RBP21.36■■□□□ 1.01
CHMP4BP1-201ENST00000556017 RAB3GAP2Q9H2M9 1393 aa21.36■■□□□ 1.01
CHMP4BP1-201ENST00000556017 UNC5CLQ8IV45 518 aa21.36■■□□□ 1.01
CHMP4BP1-201ENST00000556017 PRAM1Q96QH2 718 aa21.36■■□□□ 1.01
CHMP4BP1-201ENST00000556017 PHF8Q9UPP1 1060 aa21.36■■□□□ 1.01
CHMP4BP1-201ENST00000556017 NWD2Q9ULI1 1742 aa21.35■■□□□ 1.01
CHMP4BP1-201ENST00000556017 CABLES1Q8TDN4 633 aa21.34■■□□□ 1.01
CHMP4BP1-201ENST00000556017 SBNO1A3KN83 1393 aa21.34■■□□□ 1.01
CHMP4BP1-201ENST00000556017 SAFB2Q14151 953 aaKnown RBP eCLIP21.33■■□□□ 1.01
CHMP4BP1-201ENST00000556017 ALS2Q96Q42 1657 aa21.32■■□□□ 1
CHMP4BP1-201ENST00000556017 ANKARQ7Z5J8 1434 aa21.31■■□□□ 1
CHMP4BP1-201ENST00000556017 NRAPQ86VF7 1730 aa21.31■■□□□ 1
CHMP4BP1-201ENST00000556017 ACIN1Q9UKV3 1341 aaKnown RBP21.3■■□□□ 1
CHMP4BP1-201ENST00000556017 CRYBG1Q9Y4K1 1723 aa21.3■■□□□ 1
CHMP4BP1-201ENST00000556017 PRR36Q9H6K5 1346 aa21.29■■□□□ 1
CHMP4BP1-201ENST00000556017 VPS72Q15906 364 aa21.27■■□□□ 1
CHMP4BP1-201ENST00000556017 PMFBP1Q8TBY8 1022 aa21.27■■□□□ 1
CHMP4BP1-201ENST00000556017 ONECUT3O60422 494 aaPredicted RBP21.26■□□□□ 0.99
CHMP4BP1-201ENST00000556017 PSME1Q06323 249 aa21.26■□□□□ 0.99
CHMP4BP1-201ENST00000556017 CCDC125Q86Z20 511 aa21.26■□□□□ 0.99
CHMP4BP1-201ENST00000556017 ARHGEF28Q8N1W1 1705 aaKnown RBP21.26■□□□□ 0.99
CHMP4BP1-201ENST00000556017 ARHGEF10O15013 1369 aa21.25■□□□□ 0.99
CHMP4BP1-201ENST00000556017 FAM83GA6ND36 823 aa21.25■□□□□ 0.99
CHMP4BP1-201ENST00000556017 HIRIP3Q9BW71 556 aaPredicted RBP21.25■□□□□ 0.99
CHMP4BP1-201ENST00000556017 TRAK1Q9UPV9 953 aa21.25■□□□□ 0.99
CHMP4BP1-201ENST00000556017 TULP4Q9NRJ4 1543 aa21.24■□□□□ 0.99
CHMP4BP1-201ENST00000556017 BLMP54132 1417 aaPredicted RBP21.23■□□□□ 0.99
CHMP4BP1-201ENST00000556017 SEPT12Q8IYM1 358 aa21.23■□□□□ 0.99
CHMP4BP1-201ENST00000556017 POGKQ9P215 609 aa21.23■□□□□ 0.99
CHMP4BP1-201ENST00000556017 PLEKHG5O94827 1062 aa21.22■□□□□ 0.99
CHMP4BP1-201ENST00000556017 MINK1Q8N4C8 1332 aaPredicted RBP21.22■□□□□ 0.99
CHMP4BP1-201ENST00000556017 COL14A1Q05707 1796 aaKnown RBP21.2■□□□□ 0.99
CHMP4BP1-201ENST00000556017 DCAF11Q8TEB1 546 aa21.2■□□□□ 0.98
CHMP4BP1-201ENST00000556017 WASLO00401 505 aaPredicted RBP21.19■□□□□ 0.98
CHMP4BP1-201ENST00000556017 LMOD2Q6P5Q4 547 aa21.19■□□□□ 0.98
CHMP4BP1-201ENST00000556017 DEFB132Q7Z7B7 95 aa21.19■□□□□ 0.98
CHMP4BP1-201ENST00000556017 ZRANB1Q9UGI0 708 aa21.19■□□□□ 0.98
CHMP4BP1-201ENST00000556017 KDM2AQ9Y2K7 1162 aa21.19■□□□□ 0.98
CHMP4BP1-201ENST00000556017 ATP7BP35670 1465 aa21.19■□□□□ 0.98
CHMP4BP1-201ENST00000556017 HAP1P54257 671 aaPredicted RBP21.17■□□□□ 0.98
CHMP4BP1-201ENST00000556017 ITSN1Q15811 1721 aa21.16■□□□□ 0.98
CHMP4BP1-201ENST00000556017 TOPAZ1Q8N9V7 1692 aa21.15■□□□□ 0.98
CHMP4BP1-201ENST00000556017 THSD7AQ9UPZ6 1657 aa21.15■□□□□ 0.98
CHMP4BP1-201ENST00000556017 PHRF1Q9P1Y6 1649 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 551.4 ms