RNA–Protein interactions for RNA: ENST00000555906.5

PRKCH-219, Transcript of protein kinase C eta, humanhuman

TSL 3

Gene PRKCH, Length 459 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-219ENST00000555906 COL22A1Q8NFW1 1626 aaPredicted RBP29.32■■■□□ 2.28
PRKCH-219ENST00000555906 NRXN1Q9ULB1 1477 aa29.32■■■□□ 2.28
PRKCH-219ENST00000555906 SOS2Q07890 1332 aaPredicted RBP29.31■■■□□ 2.28
PRKCH-219ENST00000555906 ABCC11Q96J66 1382 aa29.3■■■□□ 2.28
PRKCH-219ENST00000555906 RAB3GAP2Q9H2M9 1393 aa29.3■■■□□ 2.28
PRKCH-219ENST00000555906 ORAI2Q96SN7 254 aa29.3■■■□□ 2.28
PRKCH-219ENST00000555906 FMN2Q9NZ56 1722 aa29.3■■■□□ 2.28
PRKCH-219ENST00000555906 CDK12Q9NYV4 1490 aaPredicted RBP29.29■■■□□ 2.28
PRKCH-219ENST00000555906 AFF2P51816 1311 aa29.27■■■□□ 2.28
PRKCH-219ENST00000555906 YTHDC2Q9H6S0 1430 aaKnown RBP29.27■■■□□ 2.28
PRKCH-219ENST00000555906 KIF1AQ12756 1690 aa29.25■■■□□ 2.27
PRKCH-219ENST00000555906 PXDNQ92626 1479 aa29.24■■■□□ 2.27
PRKCH-219ENST00000555906 STK26Q9P289 416 aa29.23■■■□□ 2.27
PRKCH-219ENST00000555906 PLEKHH1Q9ULM0 1364 aa29.22■■■□□ 2.27
PRKCH-219ENST00000555906 NPHP3Q7Z494 1330 aa29.21■■■□□ 2.27
PRKCH-219ENST00000555906 TMEM132EQ6IEE7 984 aa29.21■■■□□ 2.27
PRKCH-219ENST00000555906 RXRBP28702 533 aa29.2■■■□□ 2.26
PRKCH-219ENST00000555906 WAPLQ7Z5K2 1190 aa29.2■■■□□ 2.26
PRKCH-219ENST00000555906 C8orf37Q96NL8 207 aa29.2■■■□□ 2.26
PRKCH-219ENST00000555906 MARF1Q9Y4F3 1742 aaKnown RBP29.2■■■□□ 2.26
PRKCH-219ENST00000555906 ESCO1Q5FWF5 840 aa29.18■■■□□ 2.26
PRKCH-219ENST00000555906 C14orf93Q9H972 538 aaKnown RBP29.17■■■□□ 2.26
PRKCH-219ENST00000555906 DLC1Q96QB1 1528 aa29.15■■■□□ 2.26
PRKCH-219ENST00000555906 SIRT1Q96EB6 747 aa29.15■■■□□ 2.26
PRKCH-219ENST00000555906 DHX57Q6P158 1386 aaKnown RBP29.13■■■□□ 2.25
PRKCH-219ENST00000555906 RGPD8O14715 1765 aaPredicted RBP29.13■■■□□ 2.25
PRKCH-219ENST00000555906 RGS12O14924 1447 aa29.13■■■□□ 2.25
PRKCH-219ENST00000555906 ADAMTS2O95450 1211 aa29.12■■■□□ 2.25
PRKCH-219ENST00000555906 ADGRB1O14514 1584 aa29.12■■■□□ 2.25
PRKCH-219ENST00000555906 ADGRB2O60241 1585 aa29.12■■■□□ 2.25
PRKCH-219ENST00000555906 CFAP70Q5T0N1 1121 aa29.1■■■□□ 2.25
PRKCH-219ENST00000555906 NGLY1Q96IV0 654 aa29.09■■■□□ 2.25
PRKCH-219ENST00000555906 FOXO3O43524 673 aa29.08■■■□□ 2.25
PRKCH-219ENST00000555906 RBM6P78332 1123 aaKnown RBP29.08■■■□□ 2.25
PRKCH-219ENST00000555906 NUTM2FA1L443 756 aa29.07■■■□□ 2.24
PRKCH-219ENST00000555906 QTRT2Q9H974 415 aaKnown RBP29.07■■■□□ 2.24
PRKCH-219ENST00000555906 UPF1Q92900 1129 aaKnown RBP eCLIP29.06■■■□□ 2.24
PRKCH-219ENST00000555906 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.06■■■□□ 2.24
PRKCH-219ENST00000555906 XPCQ01831 940 aaPredicted RBP29.04■■■□□ 2.24
PRKCH-219ENST00000555906 USP32Q8NFA0 1604 aa29.04■■■□□ 2.24
PRKCH-219ENST00000555906 HRCP23327 699 aa29.03■■■□□ 2.24
PRKCH-219ENST00000555906 FNBP4Q8N3X1 1017 aaPredicted RBP29.03■■■□□ 2.24
PRKCH-219ENST00000555906 ATRNO75882 1429 aa29.03■■■□□ 2.24
PRKCH-219ENST00000555906 USP21Q9UK80 565 aa29.02■■■□□ 2.24
PRKCH-219ENST00000555906 PRAM1Q96QH2 718 aa29.01■■■□□ 2.23
PRKCH-219ENST00000555906 ABCA3Q99758 1704 aa29■■■□□ 2.23
PRKCH-219ENST00000555906 ANKARQ7Z5J8 1434 aa29■■■□□ 2.23
PRKCH-219ENST00000555906 SPATA31A3Q5VYP0 1347 aa28.99■■■□□ 2.23
PRKCH-219ENST00000555906 TRPC5Q9UL62 973 aaPredicted RBP28.99■■■□□ 2.23
PRKCH-219ENST00000555906 TNS3Q68CZ2 1445 aa28.98■■■□□ 2.23
PRKCH-219ENST00000555906 ARHGEF28Q8N1W1 1705 aaKnown RBP28.97■■■□□ 2.23
PRKCH-219ENST00000555906 BCL9LQ86UU0 1499 aa28.97■■■□□ 2.23
PRKCH-219ENST00000555906 STAC3Q96MF2 364 aa28.95■■■□□ 2.22
PRKCH-219ENST00000555906 PHF8Q9UPP1 1060 aa28.95■■■□□ 2.22
PRKCH-219ENST00000555906 SAFB2Q14151 953 aaKnown RBP eCLIP28.94■■■□□ 2.22
PRKCH-219ENST00000555906 POGKQ9P215 609 aa28.93■■■□□ 2.22
PRKCH-219ENST00000555906 TULP4Q9NRJ4 1543 aa28.93■■■□□ 2.22
PRKCH-219ENST00000555906 TRPM3Q9HCF6 1732 aaPredicted RBP28.92■■■□□ 2.22
PRKCH-219ENST00000555906 SBNO1A3KN83 1393 aa28.92■■■□□ 2.22
PRKCH-219ENST00000555906 EIF3AQ14152 1382 aaKnown RBP28.92■■■□□ 2.22
PRKCH-219ENST00000555906 KRT28Q7Z3Y7 464 aa28.92■■■□□ 2.22
PRKCH-219ENST00000555906 DCAF11Q8TEB1 546 aa28.92■■■□□ 2.22
PRKCH-219ENST00000555906 SLIT2O94813 1529 aa28.91■■■□□ 2.22
PRKCH-219ENST00000555906 PLCH1Q4KWH8 1693 aa28.9■■■□□ 2.22
PRKCH-219ENST00000555906 NWD2Q9ULI1 1742 aa28.89■■■□□ 2.22
PRKCH-219ENST00000555906 KIAA1210Q9ULL0 1709 aa28.89■■■□□ 2.22
PRKCH-219ENST00000555906 ITSN1Q15811 1721 aa28.89■■■□□ 2.21
PRKCH-219ENST00000555906 ATAD2Q6PL18 1390 aa28.88■■■□□ 2.21
PRKCH-219ENST00000555906 PSME1Q06323 249 aa28.88■■■□□ 2.21
PRKCH-219ENST00000555906 TRAK1Q9UPV9 953 aa28.88■■■□□ 2.21
PRKCH-219ENST00000555906 KDM2AQ9Y2K7 1162 aa28.88■■■□□ 2.21
PRKCH-219ENST00000555906 ARHGEF10O15013 1369 aa28.88■■■□□ 2.21
PRKCH-219ENST00000555906 ALS2Q96Q42 1657 aa28.87■■■□□ 2.21
PRKCH-219ENST00000555906 EP400Q96L91 3159 aa28.86■■■□□ 2.21
PRKCH-219ENST00000555906 GLI3P10071 1580 aa28.85■■■□□ 2.21
PRKCH-219ENST00000555906 MINK1Q8N4C8 1332 aaPredicted RBP28.82■■■□□ 2.2
PRKCH-219ENST00000555906 RALGAPBQ86X10 1494 aa28.81■■■□□ 2.2
PRKCH-219ENST00000555906 HIRIP3Q9BW71 556 aaPredicted RBP28.81■■■□□ 2.2
PRKCH-219ENST00000555906 UNC5CLQ8IV45 518 aa28.8■■■□□ 2.2
PRKCH-219ENST00000555906 GJD4Q96KN9 370 aaPredicted RBP28.8■■■□□ 2.2
PRKCH-219ENST00000555906 CRYBG1Q9Y4K1 1723 aa28.8■■■□□ 2.2
PRKCH-219ENST00000555906 PRR36Q9H6K5 1346 aa28.79■■■□□ 2.2
PRKCH-219ENST00000555906 PMFBP1Q8TBY8 1022 aa28.79■■■□□ 2.2
PRKCH-219ENST00000555906 ATP7BP35670 1465 aa28.78■■■□□ 2.2
PRKCH-219ENST00000555906 WASLO00401 505 aaPredicted RBP28.78■■■□□ 2.2
PRKCH-219ENST00000555906 HAP1P54257 671 aaPredicted RBP28.78■■■□□ 2.2
PRKCH-219ENST00000555906 TOPAZ1Q8N9V7 1692 aa28.77■■■□□ 2.2
PRKCH-219ENST00000555906 NRAPQ86VF7 1730 aa28.77■■■□□ 2.2
PRKCH-219ENST00000555906 GPRASP1Q5JY77 1395 aa28.75■■■□□ 2.19
PRKCH-219ENST00000555906 BRWD3Q6RI45 1802 aa28.75■■■□□ 2.19
PRKCH-219ENST00000555906 CABLES1Q8TDN4 633 aa28.74■■■□□ 2.19
PRKCH-219ENST00000555906 LMOD2Q6P5Q4 547 aa28.73■■■□□ 2.19
PRKCH-219ENST00000555906 COL14A1Q05707 1796 aaKnown RBP28.73■■■□□ 2.19
PRKCH-219ENST00000555906 VPS72Q15906 364 aa28.68■■■□□ 2.18
PRKCH-219ENST00000555906 PHRF1Q9P1Y6 1649 aaKnown RBP28.67■■■□□ 2.18
PRKCH-219ENST00000555906 PLEKHG5O94827 1062 aa28.66■■■□□ 2.18
PRKCH-219ENST00000555906 NGDNQ8NEJ9 315 aaKnown RBP28.65■■■□□ 2.18
PRKCH-219ENST00000555906 QRICH2Q9H0J4 1663 aa28.63■■■□□ 2.17
PRKCH-219ENST00000555906 CCDC125Q86Z20 511 aa28.62■■■□□ 2.17
PRKCH-219ENST00000555906 NUDT16Q96DE0 195 aaKnown RBP28.62■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms