RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 SPHKAPQ2M3C7 1700 aa17.19■□□□□ 0.34
MTHFD1-211ENST00000555709 SOS2Q07890 1332 aaPredicted RBP17.19■□□□□ 0.34
MTHFD1-211ENST00000555709 CCER1Q8TC90 406 aaPredicted RBP17.18■□□□□ 0.34
MTHFD1-211ENST00000555709 CLSPNQ9HAW4 1339 aa17.18■□□□□ 0.34
MTHFD1-211ENST00000555709 COL22A1Q8NFW1 1626 aaPredicted RBP17.18■□□□□ 0.34
MTHFD1-211ENST00000555709 ANKRD30BQ9BXX2 1392 aa17.17■□□□□ 0.34
MTHFD1-211ENST00000555709 ADGRL3Q9HAR2 1447 aa17.17■□□□□ 0.34
MTHFD1-211ENST00000555709 GJD4Q96KN9 370 aaPredicted RBP17.16■□□□□ 0.34
MTHFD1-211ENST00000555709 NRXN3Q9Y4C0 1643 aa17.15■□□□□ 0.34
MTHFD1-211ENST00000555709 MYOM2P54296 1465 aa17.15■□□□□ 0.34
MTHFD1-211ENST00000555709 C1orf167Q5SNV9 1468 aa17.15■□□□□ 0.34
MTHFD1-211ENST00000555709 NALCNQ8IZF0 1738 aa17.15■□□□□ 0.34
MTHFD1-211ENST00000555709 PSDA5PKW4 1024 aaPredicted RBP17.13■□□□□ 0.33
MTHFD1-211ENST00000555709 GLI3P10071 1580 aa17.13■□□□□ 0.33
MTHFD1-211ENST00000555709 BRWD3Q6RI45 1802 aa17.12■□□□□ 0.33
MTHFD1-211ENST00000555709 CHGAP10645 457 aaKnown RBP17.12■□□□□ 0.33
MTHFD1-211ENST00000555709 MARF1Q9Y4F3 1742 aaKnown RBP17.12■□□□□ 0.33
MTHFD1-211ENST00000555709 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.11■□□□□ 0.33
MTHFD1-211ENST00000555709 CLTCL1P53675 1640 aa17.1■□□□□ 0.33
MTHFD1-211ENST00000555709 METP08581 1390 aa17.1■□□□□ 0.33
MTHFD1-211ENST00000555709 RALGAPBQ86X10 1494 aa17.1■□□□□ 0.33
MTHFD1-211ENST00000555709 ORAI2Q96SN7 254 aa17.09■□□□□ 0.33
MTHFD1-211ENST00000555709 SF3B2Q13435 895 aaKnown RBP17.07■□□□□ 0.32
MTHFD1-211ENST00000555709 CCDC144AA2RUR9 1427 aa17.06■□□□□ 0.32
MTHFD1-211ENST00000555709 YY1P25490 414 aa17.06■□□□□ 0.32
MTHFD1-211ENST00000555709 SLIT2O94813 1529 aa17.05■□□□□ 0.32
MTHFD1-211ENST00000555709 SIN3AQ96ST3 1273 aa17.04■□□□□ 0.32
MTHFD1-211ENST00000555709 UNC5CLQ8IV45 518 aa17.03■□□□□ 0.32
MTHFD1-211ENST00000555709 SEPT12Q8IYM1 358 aa17.02■□□□□ 0.32
MTHFD1-211ENST00000555709 KIF1BO60333 1816 aa17.01■□□□□ 0.31
MTHFD1-211ENST00000555709 PXDNQ92626 1479 aa17.01■□□□□ 0.31
MTHFD1-211ENST00000555709 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
MTHFD1-211ENST00000555709 ONECUT3O60422 494 aaPredicted RBP16.99■□□□□ 0.31
MTHFD1-211ENST00000555709 BAG6P46379 1132 aa16.99■□□□□ 0.31
MTHFD1-211ENST00000555709 R3HDM1Q15032 1099 aaKnown RBP16.97■□□□□ 0.31
MTHFD1-211ENST00000555709 KRT27Q7Z3Y8 459 aa16.97■□□□□ 0.31
MTHFD1-211ENST00000555709 NPHP3Q7Z494 1330 aa16.96■□□□□ 0.31
MTHFD1-211ENST00000555709 NEUROD1Q13562 356 aa16.96■□□□□ 0.31
MTHFD1-211ENST00000555709 ROBO2Q9HCK4 1378 aa16.95■□□□□ 0.3
MTHFD1-211ENST00000555709 IFFO2Q5TF58 517 aa16.95■□□□□ 0.3
MTHFD1-211ENST00000555709 IFT172Q9UG01 1749 aa16.95■□□□□ 0.3
MTHFD1-211ENST00000555709 TONSLQ96HA7 1378 aa16.94■□□□□ 0.3
MTHFD1-211ENST00000555709 EN1Q05925 392 aaPredicted RBP16.93■□□□□ 0.3
MTHFD1-211ENST00000555709 VPS72Q15906 364 aa16.93■□□□□ 0.3
MTHFD1-211ENST00000555709 TIMELESSQ9UNS1 1208 aa16.93■□□□□ 0.3
MTHFD1-211ENST00000555709 PRAG1Q86YV5 1406 aa16.93■□□□□ 0.3
MTHFD1-211ENST00000555709 XPCQ01831 940 aaPredicted RBP16.92■□□□□ 0.3
MTHFD1-211ENST00000555709 USP32Q8NFA0 1604 aa16.92■□□□□ 0.3
MTHFD1-211ENST00000555709 DISP2A7MBM2 1401 aa16.91■□□□□ 0.3
MTHFD1-211ENST00000555709 PPLO60437 1756 aa16.91■□□□□ 0.3
MTHFD1-211ENST00000555709 FOXO3O43524 673 aa16.9■□□□□ 0.3
MTHFD1-211ENST00000555709 ZEB1P37275 1124 aaPredicted RBP16.9■□□□□ 0.3
MTHFD1-211ENST00000555709 NEXMIFQ5QGS0 1516 aa16.9■□□□□ 0.3
MTHFD1-211ENST00000555709 RGPD1P0DJD0 1748 aa16.9■□□□□ 0.3
MTHFD1-211ENST00000555709 ESCO1Q5FWF5 840 aa16.89■□□□□ 0.29
MTHFD1-211ENST00000555709 L3MBTL2Q969R5 705 aa16.88■□□□□ 0.29
MTHFD1-211ENST00000555709 NWD2Q9ULI1 1742 aa16.87■□□□□ 0.29
MTHFD1-211ENST00000555709 CDC42BPGQ6DT37 1551 aa16.87■□□□□ 0.29
MTHFD1-211ENST00000555709 SPATA31A3Q5VYP0 1347 aa16.87■□□□□ 0.29
MTHFD1-211ENST00000555709 PLCH1Q4KWH8 1693 aa16.87■□□□□ 0.29
MTHFD1-211ENST00000555709 TNS1Q9HBL0 1735 aaKnown RBP16.86■□□□□ 0.29
MTHFD1-211ENST00000555709 ZNF326Q5BKZ1 582 aaKnown RBP16.85■□□□□ 0.29
MTHFD1-211ENST00000555709 LRPPRCP42704 1394 aaKnown RBP16.84■□□□□ 0.29
MTHFD1-211ENST00000555709 NRXN1Q9ULB1 1477 aa16.84■□□□□ 0.29
MTHFD1-211ENST00000555709 EZH2Q15910 746 aaKnown RBP16.83■□□□□ 0.28
MTHFD1-211ENST00000555709 RGL3Q3MIN7 710 aa16.83■□□□□ 0.28
MTHFD1-211ENST00000555709 RPGRIP1LQ68CZ1 1315 aa16.82■□□□□ 0.28
MTHFD1-211ENST00000555709 CCDC9Q9Y3X0 531 aaKnown RBP16.82■□□□□ 0.28
MTHFD1-211ENST00000555709 CAMKK2Q96RR4 588 aa16.81■□□□□ 0.28
MTHFD1-211ENST00000555709 FAM182BQ5T319 152 aa16.8■□□□□ 0.28
MTHFD1-211ENST00000555709 DCAF11Q8TEB1 546 aa16.8■□□□□ 0.28
MTHFD1-211ENST00000555709 NRAPQ86VF7 1730 aa16.79■□□□□ 0.28
MTHFD1-211ENST00000555709 FAM98CQ17RN3 349 aaKnown RBP16.79■□□□□ 0.28
MTHFD1-211ENST00000555709 TRPM1Q7Z4N2 1603 aa16.78■□□□□ 0.28
MTHFD1-211ENST00000555709 SENP3-EIF4A1A0A087X0R7 540 aa16.78■□□□□ 0.28
MTHFD1-211ENST00000555709 A0A0G2JS52 829 aa16.78■□□□□ 0.28
MTHFD1-211ENST00000555709 MYT1Q01538 1121 aa16.78■□□□□ 0.28
MTHFD1-211ENST00000555709 ZNF784Q8NCA9 323 aaPredicted RBP16.78■□□□□ 0.28
MTHFD1-211ENST00000555709 CABLES1Q8TDN4 633 aa16.78■□□□□ 0.28
MTHFD1-211ENST00000555709 STAC3Q96MF2 364 aa16.78■□□□□ 0.28
MTHFD1-211ENST00000555709 ABCA3Q99758 1704 aa16.78■□□□□ 0.28
MTHFD1-211ENST00000555709 PIK3C2GO75747 1445 aa16.78■□□□□ 0.28
MTHFD1-211ENST00000555709 NINLQ9Y2I6 1382 aa16.77■□□□□ 0.28
MTHFD1-211ENST00000555709 KIAA1210Q9ULL0 1709 aa16.77■□□□□ 0.28
MTHFD1-211ENST00000555709 CAMTA1Q9Y6Y1 1673 aa16.77■□□□□ 0.28
MTHFD1-211ENST00000555709 FAM83GA6ND36 823 aa16.76■□□□□ 0.27
MTHFD1-211ENST00000555709 NBPF8Q3BBV2 869 aa16.76■□□□□ 0.27
MTHFD1-211ENST00000555709 RREB1Q92766 1687 aa16.75■□□□□ 0.27
MTHFD1-211ENST00000555709 ADGRF5Q8IZF2 1346 aa16.75■□□□□ 0.27
MTHFD1-211ENST00000555709 KRT28Q7Z3Y7 464 aa16.75■□□□□ 0.27
MTHFD1-211ENST00000555709 TNS3Q68CZ2 1445 aa16.75■□□□□ 0.27
MTHFD1-211ENST00000555709 ADGRB2O60241 1585 aa16.75■□□□□ 0.27
MTHFD1-211ENST00000555709 PARD3Q8TEW0 1356 aa16.75■□□□□ 0.27
MTHFD1-211ENST00000555709 KIF1AQ12756 1690 aa16.75■□□□□ 0.27
MTHFD1-211ENST00000555709 THSD7AQ9UPZ6 1657 aa16.75■□□□□ 0.27
MTHFD1-211ENST00000555709 NUTM2FA1L443 756 aa16.74■□□□□ 0.27
MTHFD1-211ENST00000555709 DCAF8L1A6NGE4 600 aa16.74■□□□□ 0.27
MTHFD1-211ENST00000555709 KDM2AQ9Y2K7 1162 aa16.74■□□□□ 0.27
MTHFD1-211ENST00000555709 NUP188Q5SRE5 1749 aa16.73■□□□□ 0.27
MTHFD1-211ENST00000555709 HAP1P54257 671 aaPredicted RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms