RNA–Protein interactions for RNA: ENST00000555679.5

PSMC1-205, Transcript of proteasome 26S subunit, ATPase 1, humanhuman

TSL 2

Gene PSMC1, Length 606 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC1-205ENST00000555679 SAMD9LQ8IVG5 1584 aa11.96□□□□□ -0.5
PSMC1-205ENST00000555679 CASKIN1Q8WXD9 1431 aa11.95□□□□□ -0.5
PSMC1-205ENST00000555679 SPRYD3Q8NCJ5 442 aa11.95□□□□□ -0.5
PSMC1-205ENST00000555679 RNF166Q96A37 237 aaPredicted RBP11.95□□□□□ -0.5
PSMC1-205ENST00000555679 ZMYM3Q14202 1370 aa11.94□□□□□ -0.5
PSMC1-205ENST00000555679 EVI5O60447 810 aa11.94□□□□□ -0.5
PSMC1-205ENST00000555679 PPP4R3BQ5MIZ7 849 aa11.94□□□□□ -0.5
PSMC1-205ENST00000555679 SUPT6HQ7KZ85 1726 aaKnown RBP11.94□□□□□ -0.5
PSMC1-205ENST00000555679 ZNF142P52746 1687 aaPredicted RBP11.94□□□□□ -0.5
PSMC1-205ENST00000555679 SYCP2Q9BX26 1530 aa11.92□□□□□ -0.5
PSMC1-205ENST00000555679 CLTCQ00610 1675 aaKnown RBP11.92□□□□□ -0.5
PSMC1-205ENST00000555679 ZNF454Q8N9F8 522 aa11.92□□□□□ -0.5
PSMC1-205ENST00000555679 MYO3AQ8NEV4 1616 aa11.92□□□□□ -0.5
PSMC1-205ENST00000555679 PLXNC1O60486 1568 aa11.92□□□□□ -0.5
PSMC1-205ENST00000555679 ZNF335Q9H4Z2 1342 aaPredicted RBP11.91□□□□□ -0.5
PSMC1-205ENST00000555679 PLA2R1Q13018 1463 aa11.91□□□□□ -0.5
PSMC1-205ENST00000555679 FOSBP53539 338 aa11.91□□□□□ -0.5
PSMC1-205ENST00000555679 ATP7AQ04656 1500 aa11.91□□□□□ -0.5
PSMC1-205ENST00000555679 GPATCH8Q9UKJ3 1502 aaKnown RBP11.91□□□□□ -0.5
PSMC1-205ENST00000555679 MAP3K9P80192 1104 aa11.9□□□□□ -0.5
PSMC1-205ENST00000555679 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.9□□□□□ -0.5
PSMC1-205ENST00000555679 INO80Q9ULG1 1556 aaPredicted RBP11.9□□□□□ -0.5
PSMC1-205ENST00000555679 CEP170BQ9Y4F5 1589 aaPredicted RBP11.9□□□□□ -0.5
PSMC1-205ENST00000555679 TCOF1Q13428 1488 aaKnown RBP11.89□□□□□ -0.51
PSMC1-205ENST00000555679 SPAG9O60271 1321 aaKnown RBP11.89□□□□□ -0.51
PSMC1-205ENST00000555679 PTPRKQ15262 1439 aa11.89□□□□□ -0.51
PSMC1-205ENST00000555679 CAMK2BQ13554 666 aa11.89□□□□□ -0.51
PSMC1-205ENST00000555679 ADGRD1Q6QNK2 874 aa11.89□□□□□ -0.51
PSMC1-205ENST00000555679 PAXIP1Q6ZW49 1069 aaPredicted RBP11.89□□□□□ -0.51
PSMC1-205ENST00000555679 FYCO1Q9BQS8 1478 aa11.89□□□□□ -0.51
PSMC1-205ENST00000555679 KIAA1107Q9UPP5 1409 aa11.88□□□□□ -0.51
PSMC1-205ENST00000555679 PTGER2P43116 358 aa11.88□□□□□ -0.51
PSMC1-205ENST00000555679 HNRNPMP52272 730 aaKnown RBP eCLIP11.88□□□□□ -0.51
PSMC1-205ENST00000555679 CFAP44Q96MT7 982 aa11.88□□□□□ -0.51
PSMC1-205ENST00000555679 KCNK17Q96T54 332 aa11.88□□□□□ -0.51
PSMC1-205ENST00000555679 ZNF777Q9ULD5 760 aaPredicted RBP11.88□□□□□ -0.51
PSMC1-205ENST00000555679 A2MP01023 1474 aa11.88□□□□□ -0.51
PSMC1-205ENST00000555679 UBAP1LF5GYI3 381 aa11.87□□□□□ -0.51
PSMC1-205ENST00000555679 PLEKHH2Q8IVE3 1493 aa11.86□□□□□ -0.51
PSMC1-205ENST00000555679 ADGBQ8N7X0 1667 aa11.86□□□□□ -0.51
PSMC1-205ENST00000555679 HRO43593 1189 aa11.85□□□□□ -0.51
PSMC1-205ENST00000555679 BCL2L12Q9HB09 334 aa11.85□□□□□ -0.51
PSMC1-205ENST00000555679 TK2O00142 265 aa11.84□□□□□ -0.51
PSMC1-205ENST00000555679 A2ML1A8K2U0 1454 aa11.83□□□□□ -0.52
PSMC1-205ENST00000555679 DNMT1P26358 1616 aaKnown RBP11.83□□□□□ -0.52
PSMC1-205ENST00000555679 GGT6Q6P531 493 aa11.83□□□□□ -0.52
PSMC1-205ENST00000555679 ADAM33Q9BZ11 813 aa11.83□□□□□ -0.52
PSMC1-205ENST00000555679 CFDP1Q9UEE9 299 aaPredicted RBP11.83□□□□□ -0.52
PSMC1-205ENST00000555679 POLR1AO95602 1720 aaPredicted RBP11.83□□□□□ -0.52
PSMC1-205ENST00000555679 DPYSL4O14531 572 aa11.82□□□□□ -0.52
PSMC1-205ENST00000555679 CCNB3Q8WWL7 1395 aa11.81□□□□□ -0.52
PSMC1-205ENST00000555679 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
PSMC1-205ENST00000555679 NEURL4Q96JN8 1562 aa11.8□□□□□ -0.52
PSMC1-205ENST00000555679 ZDHHC16Q969W1 377 aa11.8□□□□□ -0.52
PSMC1-205ENST00000555679 CPS1P31327 1500 aa11.8□□□□□ -0.52
PSMC1-205ENST00000555679 MED1Q15648 1581 aaPredicted RBP11.79□□□□□ -0.52
PSMC1-205ENST00000555679 MBD5Q9P267 1494 aa11.79□□□□□ -0.52
PSMC1-205ENST00000555679 VPS9D1Q9Y2B5 631 aa11.79□□□□□ -0.52
PSMC1-205ENST00000555679 TIAM1Q13009 1591 aa11.79□□□□□ -0.52
PSMC1-205ENST00000555679 RTEL1-TNFRSF6BF6WH68 1400 aa11.78□□□□□ -0.52
PSMC1-205ENST00000555679 HSPA1LP34931 641 aa11.78□□□□□ -0.52
PSMC1-205ENST00000555679 SHANK2Q9UPX8 1470 aa11.77□□□□□ -0.52
PSMC1-205ENST00000555679 ZNF644Q9H582 1327 aaPredicted RBP11.77□□□□□ -0.53
PSMC1-205ENST00000555679 MTUS2Q5JR59 1369 aa11.77□□□□□ -0.53
PSMC1-205ENST00000555679 DHX29Q7Z478 1369 aaKnown RBP11.77□□□□□ -0.53
PSMC1-205ENST00000555679 PZPP20742 1482 aa11.76□□□□□ -0.53
PSMC1-205ENST00000555679 FAM135AQ9P2D6 1515 aa11.76□□□□□ -0.53
PSMC1-205ENST00000555679 TOM1O60784 492 aa11.76□□□□□ -0.53
PSMC1-205ENST00000555679 PTPREP23469 700 aa11.76□□□□□ -0.53
PSMC1-205ENST00000555679 TNRQ92752 1358 aa11.76□□□□□ -0.53
PSMC1-205ENST00000555679 KDM5DQ9BY66 1539 aa11.76□□□□□ -0.53
PSMC1-205ENST00000555679 VWDEQ8N2E2 1590 aa11.75□□□□□ -0.53
PSMC1-205ENST00000555679 PIP4K2BP78356 416 aa11.75□□□□□ -0.53
PSMC1-205ENST00000555679 FBXO31Q5XUX0 539 aaPredicted RBP11.75□□□□□ -0.53
PSMC1-205ENST00000555679 ZBED2Q9BTP6 218 aa11.75□□□□□ -0.53
PSMC1-205ENST00000555679 ALKQ9UM73 1620 aa11.75□□□□□ -0.53
PSMC1-205ENST00000555679 EHBP1L1Q8N3D4 1523 aa11.74□□□□□ -0.53
PSMC1-205ENST00000555679 DEPDC5O75140 1603 aa11.74□□□□□ -0.53
PSMC1-205ENST00000555679 MED14O60244 1454 aa11.73□□□□□ -0.53
PSMC1-205ENST00000555679 PHF14O94880 888 aa11.73□□□□□ -0.53
PSMC1-205ENST00000555679 SLC4A5Q9BY07 1137 aa11.73□□□□□ -0.53
PSMC1-205ENST00000555679 NLRP1Q9C000 1473 aa11.72□□□□□ -0.53
PSMC1-205ENST00000555679 CEP162Q5TB80 1403 aa11.72□□□□□ -0.53
PSMC1-205ENST00000555679 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.72□□□□□ -0.53
PSMC1-205ENST00000555679 KIF3BO15066 747 aa11.72□□□□□ -0.53
PSMC1-205ENST00000555679 COL9A1P20849 921 aa11.72□□□□□ -0.53
PSMC1-205ENST00000555679 ANKLE2Q86XL3 938 aa11.72□□□□□ -0.53
PSMC1-205ENST00000555679 UGGT1Q9NYU2 1555 aa11.71□□□□□ -0.53
PSMC1-205ENST00000555679 CCDC141Q6ZP82 1450 aa11.71□□□□□ -0.53
PSMC1-205ENST00000555679 MIA2Q96PC5 1412 aa11.71□□□□□ -0.53
PSMC1-205ENST00000555679 BHMG1C9JSJ3 638 aaPredicted RBP11.71□□□□□ -0.53
PSMC1-205ENST00000555679 THEMISQ8N1K5 641 aaPredicted RBP11.71□□□□□ -0.53
PSMC1-205ENST00000555679 IQGAP1P46940 1657 aa11.71□□□□□ -0.54
PSMC1-205ENST00000555679 NPHP4O75161 1426 aaPredicted RBP11.7□□□□□ -0.54
PSMC1-205ENST00000555679 STRCP1A6NGW2 1772 aa11.7□□□□□ -0.54
PSMC1-205ENST00000555679 WASHC2CQ9Y4E1 1318 aa11.7□□□□□ -0.54
PSMC1-205ENST00000555679 TYW1BQ6NUM6 668 aa11.7□□□□□ -0.54
PSMC1-205ENST00000555679 E2F4Q16254 413 aa11.69□□□□□ -0.54
PSMC1-205ENST00000555679 DDX12PQ92771 950 aa11.69□□□□□ -0.54
PSMC1-205ENST00000555679 TSHZ2Q9NRE2 1034 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms