RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 NALCNQ8IZF0 1738 aa13.43□□□□□ -0.26
SIX1-204ENST00000555627 STAG3Q9UJ98 1225 aa13.43□□□□□ -0.26
SIX1-204ENST00000555627 METP08581 1390 aa13.43□□□□□ -0.26
SIX1-204ENST00000555627 LRPPRCP42704 1394 aaKnown RBP13.43□□□□□ -0.26
SIX1-204ENST00000555627 USP32Q8NFA0 1604 aa13.42□□□□□ -0.26
SIX1-204ENST00000555627 PTPRUQ92729 1446 aa13.42□□□□□ -0.26
SIX1-204ENST00000555627 LTKP29376 864 aa13.42□□□□□ -0.26
SIX1-204ENST00000555627 STRCP1A6NGW2 1772 aa13.41□□□□□ -0.26
SIX1-204ENST00000555627 DDX10Q13206 875 aaKnown RBP13.41□□□□□ -0.26
SIX1-204ENST00000555627 TMEM132EQ6IEE7 984 aa13.41□□□□□ -0.26
SIX1-204ENST00000555627 ZRANB1Q9UGI0 708 aa13.41□□□□□ -0.26
SIX1-204ENST00000555627 ANKRD26Q9UPS8 1709 aa13.4□□□□□ -0.26
SIX1-204ENST00000555627 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.4□□□□□ -0.26
SIX1-204ENST00000555627 RBM33Q96EV2 1170 aaKnown RBP13.4□□□□□ -0.26
SIX1-204ENST00000555627 AKAP12Q02952 1782 aa13.4□□□□□ -0.26
SIX1-204ENST00000555627 ITSN1Q15811 1721 aa13.39□□□□□ -0.27
SIX1-204ENST00000555627 PTCH1Q13635 1447 aa13.39□□□□□ -0.27
SIX1-204ENST00000555627 FAM135BQ49AJ0 1406 aa13.39□□□□□ -0.27
SIX1-204ENST00000555627 CENPJQ9HC77 1338 aaPredicted RBP13.39□□□□□ -0.27
SIX1-204ENST00000555627 MON2Q7Z3U7 1717 aa13.38□□□□□ -0.27
SIX1-204ENST00000555627 CDK12Q9NYV4 1490 aaPredicted RBP13.37□□□□□ -0.27
SIX1-204ENST00000555627 KIF20BQ96Q89 1820 aa13.37□□□□□ -0.27
SIX1-204ENST00000555627 ABCC11Q96J66 1382 aa13.37□□□□□ -0.27
SIX1-204ENST00000555627 PLEKHH1Q9ULM0 1364 aa13.37□□□□□ -0.27
SIX1-204ENST00000555627 FMN2Q9NZ56 1722 aa13.37□□□□□ -0.27
SIX1-204ENST00000555627 MIER1Q8N108 512 aa13.37□□□□□ -0.27
SIX1-204ENST00000555627 RGPD8O14715 1765 aaPredicted RBP13.37□□□□□ -0.27
SIX1-204ENST00000555627 NRKQ7Z2Y5 1582 aa13.37□□□□□ -0.27
SIX1-204ENST00000555627 ZNF772Q68DY9 489 aaPredicted RBP13.36□□□□□ -0.27
SIX1-204ENST00000555627 TRAK1Q9UPV9 953 aa13.36□□□□□ -0.27
SIX1-204ENST00000555627 XIRP1Q702N8 1843 aaKnown RBP13.35□□□□□ -0.27
SIX1-204ENST00000555627 NPHP4O75161 1426 aaPredicted RBP13.35□□□□□ -0.27
SIX1-204ENST00000555627 RXRBP28702 533 aa13.34□□□□□ -0.27
SIX1-204ENST00000555627 ROBO2Q9HCK4 1378 aa13.33□□□□□ -0.27
SIX1-204ENST00000555627 TMF1P82094 1093 aa13.33□□□□□ -0.28
SIX1-204ENST00000555627 THEMISQ8N1K5 641 aaPredicted RBP13.33□□□□□ -0.28
SIX1-204ENST00000555627 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
SIX1-204ENST00000555627 ATP7BP35670 1465 aa13.32□□□□□ -0.28
SIX1-204ENST00000555627 TXNDC2Q86VQ3 553 aa13.32□□□□□ -0.28
SIX1-204ENST00000555627 LRP6O75581 1613 aa13.31□□□□□ -0.28
SIX1-204ENST00000555627 CD163L1Q9NR16 1453 aa13.31□□□□□ -0.28
SIX1-204ENST00000555627 ANKLE2Q86XL3 938 aa13.31□□□□□ -0.28
SIX1-204ENST00000555627 PIK3R4Q99570 1358 aa13.31□□□□□ -0.28
SIX1-204ENST00000555627 ROBO1Q9Y6N7 1651 aa13.31□□□□□ -0.28
SIX1-204ENST00000555627 JCADQ9P266 1359 aa13.3□□□□□ -0.28
SIX1-204ENST00000555627 HDGFP51858 240 aaKnown RBP13.29□□□□□ -0.28
SIX1-204ENST00000555627 PRAM1Q96QH2 718 aa13.29□□□□□ -0.28
SIX1-204ENST00000555627 STK26Q9P289 416 aa13.29□□□□□ -0.28
SIX1-204ENST00000555627 EID1Q9Y6B2 187 aa13.29□□□□□ -0.28
SIX1-204ENST00000555627 MEX3CQ5U5Q3 659 aaKnown RBP13.28□□□□□ -0.28
SIX1-204ENST00000555627 RGS12O14924 1447 aa13.28□□□□□ -0.28
SIX1-204ENST00000555627 POLR3GLQ9BT43 218 aa13.27□□□□□ -0.29
SIX1-204ENST00000555627 TBX22Q9Y458 520 aa13.27□□□□□ -0.29
SIX1-204ENST00000555627 NKTRP30414 1462 aaKnown RBP13.27□□□□□ -0.29
SIX1-204ENST00000555627 MARF1Q9Y4F3 1742 aaKnown RBP13.27□□□□□ -0.29
SIX1-204ENST00000555627 SLC26A8Q96RN1 970 aa13.26□□□□□ -0.29
SIX1-204ENST00000555627 USP54Q70EL1 1684 aa13.25□□□□□ -0.29
SIX1-204ENST00000555627 LRP5O75197 1615 aa13.25□□□□□ -0.29
SIX1-204ENST00000555627 PARD3Q8TEW0 1356 aa13.25□□□□□ -0.29
SIX1-204ENST00000555627 MINK1Q8N4C8 1332 aaPredicted RBP13.25□□□□□ -0.29
SIX1-204ENST00000555627 SIRT1Q96EB6 747 aa13.25□□□□□ -0.29
SIX1-204ENST00000555627 ATAD2Q6PL18 1390 aa13.24□□□□□ -0.29
SIX1-204ENST00000555627 NINLQ9Y2I6 1382 aa13.24□□□□□ -0.29
SIX1-204ENST00000555627 PER1O15534 1290 aaPredicted RBP13.24□□□□□ -0.29
SIX1-204ENST00000555627 SAFB2Q14151 953 aaKnown RBP eCLIP13.24□□□□□ -0.29
SIX1-204ENST00000555627 WAPLQ7Z5K2 1190 aa13.24□□□□□ -0.29
SIX1-204ENST00000555627 EVC2Q86UK5 1308 aa13.23□□□□□ -0.29
SIX1-204ENST00000555627 NUTM2BA6NNL0 878 aaPredicted RBP13.23□□□□□ -0.29
SIX1-204ENST00000555627 NUTM2EB1AL46 878 aaPredicted RBP13.23□□□□□ -0.29
SIX1-204ENST00000555627 CDCA8Q53HL2 280 aa13.23□□□□□ -0.29
SIX1-204ENST00000555627 NUTM2AQ8IVF1 878 aaPredicted RBP13.23□□□□□ -0.29
SIX1-204ENST00000555627 PUS7Q96PZ0 661 aaKnown RBP13.23□□□□□ -0.29
SIX1-204ENST00000555627 PRKRIP1Q9H875 184 aaPredicted RBP13.23□□□□□ -0.29
SIX1-204ENST00000555627 NSD3Q9BZ95 1437 aa13.22□□□□□ -0.29
SIX1-204ENST00000555627 PHLPP1O60346 1717 aa13.22□□□□□ -0.29
SIX1-204ENST00000555627 ANKRD36BQ8N2N9 1353 aa13.22□□□□□ -0.29
SIX1-204ENST00000555627 SHPRHQ149N8 1683 aa13.22□□□□□ -0.29
SIX1-204ENST00000555627 SLC24A1O60721 1099 aa13.22□□□□□ -0.29
SIX1-204ENST00000555627 ADGRL3Q9HAR2 1447 aa13.22□□□□□ -0.29
SIX1-204ENST00000555627 A0A1W2PP64 1363 aa13.21□□□□□ -0.29
SIX1-204ENST00000555627 NPC1L1Q9UHC9 1359 aa13.21□□□□□ -0.29
SIX1-204ENST00000555627 SPATA31A6Q5VVP1 1343 aa13.21□□□□□ -0.29
SIX1-204ENST00000555627 ANP32CO43423 234 aa13.21□□□□□ -0.29
SIX1-204ENST00000555627 PANK3Q9H999 370 aa13.2□□□□□ -0.3
SIX1-204ENST00000555627 POGKQ9P215 609 aa13.2□□□□□ -0.3
SIX1-204ENST00000555627 PRR36Q9H6K5 1346 aa13.19□□□□□ -0.3
SIX1-204ENST00000555627 PIK3C2AO00443 1686 aa13.19□□□□□ -0.3
SIX1-204ENST00000555627 CCER2I3L3R5 266 aa13.19□□□□□ -0.3
SIX1-204ENST00000555627 KCNA6P17658 529 aa13.19□□□□□ -0.3
SIX1-204ENST00000555627 YY1P25490 414 aa13.19□□□□□ -0.3
SIX1-204ENST00000555627 CABP2Q9NPB3 220 aa13.19□□□□□ -0.3
SIX1-204ENST00000555627 AMOTL2Q9Y2J4 779 aa13.19□□□□□ -0.3
SIX1-204ENST00000555627 KTN1Q86UP2 1357 aaKnown RBP13.19□□□□□ -0.3
SIX1-204ENST00000555627 EP400Q96L91 3159 aa13.18□□□□□ -0.3
SIX1-204ENST00000555627 AMER1Q5JTC6 1135 aaPredicted RBP13.18□□□□□ -0.3
SIX1-204ENST00000555627 BCANQ96GW7 911 aa13.18□□□□□ -0.3
SIX1-204ENST00000555627 CPSF1Q10570 1443 aaKnown RBP13.18□□□□□ -0.3
SIX1-204ENST00000555627 KIF1AQ12756 1690 aa13.18□□□□□ -0.3
SIX1-204ENST00000555627 COL16A1Q07092 1604 aaPredicted RBP13.17□□□□□ -0.3
SIX1-204ENST00000555627 TRPM3Q9HCF6 1732 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms