RNA–Protein interactions for RNA: ENST00000555565.5

TDP1-212, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 524 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-212ENST00000555565 GJD4Q96KN9 370 aaPredicted RBP16.45■□□□□ 0.22
TDP1-212ENST00000555565 PRAG1Q86YV5 1406 aa16.44■□□□□ 0.22
TDP1-212ENST00000555565 SPHKAPQ2M3C7 1700 aa16.42■□□□□ 0.22
TDP1-212ENST00000555565 PXDNQ92626 1479 aa16.42■□□□□ 0.22
TDP1-212ENST00000555565 BLMP54132 1417 aaPredicted RBP16.4■□□□□ 0.22
TDP1-212ENST00000555565 DEFB132Q7Z7B7 95 aa16.4■□□□□ 0.22
TDP1-212ENST00000555565 CLTCL1P53675 1640 aa16.4■□□□□ 0.22
TDP1-212ENST00000555565 NAIPQ13075 1403 aa16.38■□□□□ 0.21
TDP1-212ENST00000555565 ESCO1Q5FWF5 840 aa16.38■□□□□ 0.21
TDP1-212ENST00000555565 NPHP3Q7Z494 1330 aa16.38■□□□□ 0.21
TDP1-212ENST00000555565 GLI3P10071 1580 aa16.38■□□□□ 0.21
TDP1-212ENST00000555565 RALGAPBQ86X10 1494 aa16.37■□□□□ 0.21
TDP1-212ENST00000555565 SLIT2O94813 1529 aa16.37■□□□□ 0.21
TDP1-212ENST00000555565 FOXO3O43524 673 aa16.37■□□□□ 0.21
TDP1-212ENST00000555565 XPCQ01831 940 aaPredicted RBP16.37■□□□□ 0.21
TDP1-212ENST00000555565 UNC5CLQ8IV45 518 aa16.37■□□□□ 0.21
TDP1-212ENST00000555565 HFM1A2PYH4 1435 aa16.36■□□□□ 0.21
TDP1-212ENST00000555565 MARF1Q9Y4F3 1742 aaKnown RBP16.36■□□□□ 0.21
TDP1-212ENST00000555565 VGFO15240 615 aaPredicted RBP16.36■□□□□ 0.21
TDP1-212ENST00000555565 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.33■□□□□ 0.21
TDP1-212ENST00000555565 ONECUT3O60422 494 aaPredicted RBP16.33■□□□□ 0.2
TDP1-212ENST00000555565 LRP5O75197 1615 aa16.32■□□□□ 0.2
TDP1-212ENST00000555565 CDC42BPGQ6DT37 1551 aa16.32■□□□□ 0.2
TDP1-212ENST00000555565 SPATA31A3Q5VYP0 1347 aa16.31■□□□□ 0.2
TDP1-212ENST00000555565 SEPT12Q8IYM1 358 aa16.31■□□□□ 0.2
TDP1-212ENST00000555565 BRWD3Q6RI45 1802 aa16.31■□□□□ 0.2
TDP1-212ENST00000555565 RPGRIP1LQ68CZ1 1315 aa16.3■□□□□ 0.2
TDP1-212ENST00000555565 KIF1BO60333 1816 aa16.29■□□□□ 0.2
TDP1-212ENST00000555565 LRPPRCP42704 1394 aaKnown RBP16.28■□□□□ 0.2
TDP1-212ENST00000555565 NUTM2FA1L443 756 aa16.28■□□□□ 0.2
TDP1-212ENST00000555565 VPS72Q15906 364 aa16.28■□□□□ 0.2
TDP1-212ENST00000555565 WAPLQ7Z5K2 1190 aa16.28■□□□□ 0.2
TDP1-212ENST00000555565 HRCP23327 699 aa16.27■□□□□ 0.2
TDP1-212ENST00000555565 PSDA5PKW4 1024 aaPredicted RBP16.26■□□□□ 0.19
TDP1-212ENST00000555565 SF3B2Q13435 895 aaKnown RBP16.25■□□□□ 0.19
TDP1-212ENST00000555565 KRT27Q7Z3Y8 459 aa16.25■□□□□ 0.19
TDP1-212ENST00000555565 USP32Q8NFA0 1604 aa16.25■□□□□ 0.19
TDP1-212ENST00000555565 TECPR2O15040 1411 aa16.25■□□□□ 0.19
TDP1-212ENST00000555565 PLEKHH1Q9ULM0 1364 aa16.25■□□□□ 0.19
TDP1-212ENST00000555565 KRT28Q7Z3Y7 464 aa16.24■□□□□ 0.19
TDP1-212ENST00000555565 CABLES1Q8TDN4 633 aa16.24■□□□□ 0.19
TDP1-212ENST00000555565 SLC4A1APQ9BWU0 796 aaKnown RBP16.24■□□□□ 0.19
TDP1-212ENST00000555565 ADGRF5Q8IZF2 1346 aa16.23■□□□□ 0.19
TDP1-212ENST00000555565 PPLO60437 1756 aa16.23■□□□□ 0.19
TDP1-212ENST00000555565 STK26Q9P289 416 aa16.22■□□□□ 0.19
TDP1-212ENST00000555565 ABCC11Q96J66 1382 aa16.22■□□□□ 0.19
TDP1-212ENST00000555565 CCDC144AA2RUR9 1427 aa16.21■□□□□ 0.19
TDP1-212ENST00000555565 FAM83GA6ND36 823 aa16.21■□□□□ 0.19
TDP1-212ENST00000555565 BAG6P46379 1132 aa16.19■□□□□ 0.18
TDP1-212ENST00000555565 TMEM132EQ6IEE7 984 aa16.19■□□□□ 0.18
TDP1-212ENST00000555565 FMN2Q9NZ56 1722 aa16.19■□□□□ 0.18
TDP1-212ENST00000555565 EN1Q05925 392 aaPredicted RBP16.18■□□□□ 0.18
TDP1-212ENST00000555565 NWD2Q9ULI1 1742 aa16.18■□□□□ 0.18
TDP1-212ENST00000555565 TNS3Q68CZ2 1445 aa16.18■□□□□ 0.18
TDP1-212ENST00000555565 PLCH1Q4KWH8 1693 aa16.17■□□□□ 0.18
TDP1-212ENST00000555565 KIF1AQ12756 1690 aa16.16■□□□□ 0.18
TDP1-212ENST00000555565 SIRT1Q96EB6 747 aa16.16■□□□□ 0.18
TDP1-212ENST00000555565 PHF8Q9UPP1 1060 aa16.16■□□□□ 0.18
TDP1-212ENST00000555565 CCDC9Q9Y3X0 531 aaKnown RBP16.16■□□□□ 0.18
TDP1-212ENST00000555565 SBNO1A3KN83 1393 aa16.15■□□□□ 0.18
TDP1-212ENST00000555565 R3HDM1Q15032 1099 aaKnown RBP16.15■□□□□ 0.18
TDP1-212ENST00000555565 FAM98CQ17RN3 349 aaKnown RBP16.15■□□□□ 0.18
TDP1-212ENST00000555565 SPATA31E1Q6ZUB1 1445 aa16.14■□□□□ 0.17
TDP1-212ENST00000555565 PSME1Q06323 249 aa16.14■□□□□ 0.17
TDP1-212ENST00000555565 FAM182BQ5T319 152 aa16.14■□□□□ 0.17
TDP1-212ENST00000555565 DISP2A7MBM2 1401 aa16.13■□□□□ 0.17
TDP1-212ENST00000555565 PLEKHG5O94827 1062 aa16.13■□□□□ 0.17
TDP1-212ENST00000555565 HAP1P54257 671 aaPredicted RBP16.13■□□□□ 0.17
TDP1-212ENST00000555565 MPHOSPH9Q99550 1183 aa16.13■□□□□ 0.17
TDP1-212ENST00000555565 NRXN1Q9ULB1 1477 aa16.13■□□□□ 0.17
TDP1-212ENST00000555565 KNDC1Q76NI1 1749 aa16.13■□□□□ 0.17
TDP1-212ENST00000555565 ABCA3Q99758 1704 aa16.13■□□□□ 0.17
TDP1-212ENST00000555565 YTHDC2Q9H6S0 1430 aaKnown RBP16.12■□□□□ 0.17
TDP1-212ENST00000555565 RGPD8O14715 1765 aaPredicted RBP16.12■□□□□ 0.17
TDP1-212ENST00000555565 PIK3C2GO75747 1445 aa16.11■□□□□ 0.17
TDP1-212ENST00000555565 NRAPQ86VF7 1730 aa16.11■□□□□ 0.17
TDP1-212ENST00000555565 RGL3Q3MIN7 710 aa16.11■□□□□ 0.17
TDP1-212ENST00000555565 BTG4Q9NY30 223 aa16.11■□□□□ 0.17
TDP1-212ENST00000555565 ARHGEF10O15013 1369 aa16.11■□□□□ 0.17
TDP1-212ENST00000555565 EZH2Q15910 746 aaKnown RBP16.1■□□□□ 0.17
TDP1-212ENST00000555565 CAMKK2Q96RR4 588 aa16.1■□□□□ 0.17
TDP1-212ENST00000555565 ANKRD30BQ9BXX2 1392 aa16.1■□□□□ 0.17
TDP1-212ENST00000555565 LMOD2Q6P5Q4 547 aa16.09■□□□□ 0.17
TDP1-212ENST00000555565 SPATA31A5Q5VU36 1347 aa16.09■□□□□ 0.17
TDP1-212ENST00000555565 SPATA31A7Q8IWB4 1347 aa16.09■□□□□ 0.17
TDP1-212ENST00000555565 A0A0G2JS52 829 aa16.08■□□□□ 0.16
TDP1-212ENST00000555565 MYT1Q01538 1121 aa16.08■□□□□ 0.16
TDP1-212ENST00000555565 C14orf93Q9H972 538 aaKnown RBP16.08■□□□□ 0.16
TDP1-212ENST00000555565 RGPD1P0DJD0 1748 aa16.08■□□□□ 0.16
TDP1-212ENST00000555565 IFT172Q9UG01 1749 aa16.08■□□□□ 0.16
TDP1-212ENST00000555565 PMFBP1Q8TBY8 1022 aa16.07■□□□□ 0.16
TDP1-212ENST00000555565 TNS1Q9HBL0 1735 aaKnown RBP16.06■□□□□ 0.16
TDP1-212ENST00000555565 THSD7AQ9UPZ6 1657 aa16.05■□□□□ 0.16
TDP1-212ENST00000555565 ACIN1Q9UKV3 1341 aaKnown RBP16.04■□□□□ 0.16
TDP1-212ENST00000555565 TRPM3Q9HCF6 1732 aaPredicted RBP16.04■□□□□ 0.16
TDP1-212ENST00000555565 COL14A1Q05707 1796 aaKnown RBP16.03■□□□□ 0.16
TDP1-212ENST00000555565 YY1P25490 414 aa16.03■□□□□ 0.16
TDP1-212ENST00000555565 CFAP70Q5T0N1 1121 aa16.03■□□□□ 0.16
TDP1-212ENST00000555565 PRAM1Q96QH2 718 aa16.03■□□□□ 0.16
TDP1-212ENST00000555565 ANKARQ7Z5J8 1434 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms