RNA–Protein interactions for RNA: ENST00000555506.1

KTN1-222, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 1,464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-222ENST00000555506 FUT2Q10981 343 aa8.92□□□□□ -0.98
KTN1-222ENST00000555506 PUS10Q3MIT2 529 aaKnown RBP8.92□□□□□ -0.98
KTN1-222ENST00000555506 PARP9Q8IXQ6 854 aa8.92□□□□□ -0.98
KTN1-222ENST00000555506 GIGYF2Q6Y7W6 1299 aaKnown RBP8.91□□□□□ -0.98
KTN1-222ENST00000555506 ZPR1O75312 459 aa8.9□□□□□ -0.98
KTN1-222ENST00000555506 SSTR3P32745 418 aaPredicted RBP8.9□□□□□ -0.98
KTN1-222ENST00000555506 PDE4DQ08499 809 aa8.9□□□□□ -0.98
KTN1-222ENST00000555506 ZNF697Q5TEC3 545 aa8.89□□□□□ -0.99
KTN1-222ENST00000555506 TLL1O43897 1013 aa8.88□□□□□ -0.99
KTN1-222ENST00000555506 ATP6V1AP38606 617 aa8.88□□□□□ -0.99
KTN1-222ENST00000555506 MORN1Q5T089 497 aa8.88□□□□□ -0.99
KTN1-222ENST00000555506 GPBP1L1Q9HC44 474 aaPredicted RBP8.88□□□□□ -0.99
KTN1-222ENST00000555506 RNF223E7ERA6 249 aa8.87□□□□□ -0.99
KTN1-222ENST00000555506 TNFRSF10AO00220 468 aa8.87□□□□□ -0.99
KTN1-222ENST00000555506 KDM4AO75164 1064 aa8.87□□□□□ -0.99
KTN1-222ENST00000555506 MS4A1P11836 297 aa8.87□□□□□ -0.99
KTN1-222ENST00000555506 SCUBE3Q8IX30 993 aa8.87□□□□□ -0.99
KTN1-222ENST00000555506 CRIPAKQ8N1N5 446 aa8.87□□□□□ -0.99
KTN1-222ENST00000555506 KRTAP4-8Q9BYQ9 185 aa8.86□□□□□ -0.99
KTN1-222ENST00000555506 KDM4CQ9H3R0 1056 aa8.86□□□□□ -0.99
KTN1-222ENST00000555506 GDF9O60383 454 aa8.85□□□□□ -0.99
KTN1-222ENST00000555506 NR1I2O75469 434 aa8.85□□□□□ -0.99
KTN1-222ENST00000555506 SLC27A5Q9Y2P5 690 aa8.85□□□□□ -0.99
KTN1-222ENST00000555506 C14orf37Q86TY3 774 aa8.84□□□□□ -0.99
KTN1-222ENST00000555506 ANKLE1Q8NAG6 615 aa8.84□□□□□ -0.99
KTN1-222ENST00000555506 HLA-CQ95604 372 aa8.84□□□□□ -0.99
KTN1-222ENST00000555506 BEGAINQ9BUH8 593 aa8.83□□□□□ -1
KTN1-222ENST00000555506 HOXA2O43364 376 aa8.83□□□□□ -1
KTN1-222ENST00000555506 LCE2CQ5TA81 110 aa8.83□□□□□ -1
KTN1-222ENST00000555506 GMPR2Q9P2T1 348 aaKnown RBP8.83□□□□□ -1
KTN1-222ENST00000555506 AXIN1O15169 862 aa8.82□□□□□ -1
KTN1-222ENST00000555506 USP46P62068 366 aa8.82□□□□□ -1
KTN1-222ENST00000555506 THAP11Q96EK4 314 aa8.82□□□□□ -1
KTN1-222ENST00000555506 GUCA2AQ02747 115 aa8.81□□□□□ -1
KTN1-222ENST00000555506 GRIPAP1Q4V328 841 aa8.81□□□□□ -1
KTN1-222ENST00000555506 NUTM1Q86Y26 1132 aa8.81□□□□□ -1
KTN1-222ENST00000555506 IL27Q8NEV9 243 aa8.81□□□□□ -1
KTN1-222ENST00000555506 SPIRE2Q8WWL2 714 aa8.81□□□□□ -1
KTN1-222ENST00000555506 ADH1BP00325 375 aa8.8□□□□□ -1
KTN1-222ENST00000555506 CTC1Q2NKJ3 1217 aa8.8□□□□□ -1
KTN1-222ENST00000555506 RNF19BQ6ZMZ0 732 aa8.8□□□□□ -1
KTN1-222ENST00000555506 TERTO14746 1132 aaKnown RBP8.79□□□□□ -1
KTN1-222ENST00000555506 EMID1Q96A84 441 aaPredicted RBP8.79□□□□□ -1
KTN1-222ENST00000555506 SPSB2Q99619 263 aa8.79□□□□□ -1
KTN1-222ENST00000555506 S1PR4O95977 384 aa8.78□□□□□ -1
KTN1-222ENST00000555506 BRICD5Q6PL45 260 aa8.78□□□□□ -1
KTN1-222ENST00000555506 FMNL1O95466 1100 aaPredicted RBP8.77□□□□□ -1
KTN1-222ENST00000555506 NDUFV2P19404 249 aa8.77□□□□□ -1
KTN1-222ENST00000555506 LIAT1Q6ZQX7 453 aa8.77□□□□□ -1
KTN1-222ENST00000555506 TBC1D2Q9BYX2 928 aa8.77□□□□□ -1
KTN1-222ENST00000555506 SALL2Q9Y467 1007 aaPredicted RBP8.77□□□□□ -1
KTN1-222ENST00000555506 MOXD2PA6NHM9 499 aa8.77□□□□□ -1.01
KTN1-222ENST00000555506 XP32Q5T750 250 aa8.77□□□□□ -1.01
KTN1-222ENST00000555506 DACH1Q9UI36 760 aa8.77□□□□□ -1.01
KTN1-222ENST00000555506 PPEF1O14829 653 aaPredicted RBP8.76□□□□□ -1.01
KTN1-222ENST00000555506 AVPP01185 164 aa8.76□□□□□ -1.01
KTN1-222ENST00000555506 FAM160A2Q8N612 972 aaPredicted RBP8.76□□□□□ -1.01
KTN1-222ENST00000555506 SLC6A16Q9GZN6 736 aa8.76□□□□□ -1.01
KTN1-222ENST00000555506 PCDHGC3Q9UN70 934 aa8.76□□□□□ -1.01
KTN1-222ENST00000555506 SLC16A10Q8TF71 515 aa8.75□□□□□ -1.01
KTN1-222ENST00000555506 SYMPKQ92797 1274 aaKnown RBP8.75□□□□□ -1.01
KTN1-222ENST00000555506 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.74□□□□□ -1.01
KTN1-222ENST00000555506 FDX1P10109 184 aa8.74□□□□□ -1.01
KTN1-222ENST00000555506 Q3C1V9 767 aa8.74□□□□□ -1.01
KTN1-222ENST00000555506 ZSCAN1Q8NBB4 408 aa8.74□□□□□ -1.01
KTN1-222ENST00000555506 FAM117AQ9C073 453 aa8.74□□□□□ -1.01
KTN1-222ENST00000555506 PRDM9Q9NQV7 894 aa8.74□□□□□ -1.01
KTN1-222ENST00000555506 LORP23490 312 aaPredicted RBP8.72□□□□□ -1.01
KTN1-222ENST00000555506 SMCPP49901 116 aaPredicted RBP8.72□□□□□ -1.01
KTN1-222ENST00000555506 FOXC1Q12948 553 aa8.71□□□□□ -1.01
KTN1-222ENST00000555506 DIXDC1Q155Q3 683 aa8.71□□□□□ -1.01
KTN1-222ENST00000555506 MSS51Q4VC12 460 aa8.71□□□□□ -1.01
KTN1-222ENST00000555506 RSBN1LQ6PCB5 846 aaPredicted RBP8.71□□□□□ -1.01
KTN1-222ENST00000555506 DDRGK1Q96HY6 314 aa8.71□□□□□ -1.01
KTN1-222ENST00000555506 USB1Q9BQ65 265 aaKnown RBP8.71□□□□□ -1.01
KTN1-222ENST00000555506 SENP2Q9HC62 589 aa8.71□□□□□ -1.01
KTN1-222ENST00000555506 MYSM1Q5VVJ2 828 aa8.7□□□□□ -1.02
KTN1-222ENST00000555506 KRTAP9-2Q9BYQ4 174 aa8.7□□□□□ -1.02
KTN1-222ENST00000555506 SPTLC1O15269 473 aa8.7□□□□□ -1.02
KTN1-222ENST00000555506 KCTD17Q8N5Z5 321 aa8.7□□□□□ -1.02
KTN1-222ENST00000555506 PCDHB15Q9Y5E8 787 aa8.7□□□□□ -1.02
KTN1-222ENST00000555506 PLEKHG3A1L390 1219 aa8.69□□□□□ -1.02
KTN1-222ENST00000555506 C6orf229H3BNL8 230 aa8.69□□□□□ -1.02
KTN1-222ENST00000555506 PLA2G2CQ5R387 149 aa8.69□□□□□ -1.02
KTN1-222ENST00000555506 RIC3Q7Z5B4 369 aa8.69□□□□□ -1.02
KTN1-222ENST00000555506 CYP4X1Q8N118 509 aa8.69□□□□□ -1.02
KTN1-222ENST00000555506 LIMD1Q9UGP4 676 aa8.69□□□□□ -1.02
KTN1-222ENST00000555506 GJA5P36382 358 aa8.68□□□□□ -1.02
KTN1-222ENST00000555506 KRTAP9-6A0A140TA67 174 aa8.67□□□□□ -1.02
KTN1-222ENST00000555506 MMP16P51512 607 aa8.67□□□□□ -1.02
KTN1-222ENST00000555506 RETREG3Q86VR2 466 aa8.67□□□□□ -1.02
KTN1-222ENST00000555506 FCF1Q9Y324 198 aaKnown RBP8.67□□□□□ -1.02
KTN1-222ENST00000555506 PKD2L1Q9P0L9 805 aa8.66□□□□□ -1.02
KTN1-222ENST00000555506 DXOO77932 396 aaKnown RBP8.65□□□□□ -1.02
KTN1-222ENST00000555506 MTMR2Q13614 643 aa8.65□□□□□ -1.02
KTN1-222ENST00000555506 CSPP1Q1MSJ5 1256 aa8.65□□□□□ -1.02
KTN1-222ENST00000555506 POLR3EQ9NVU0 708 aa8.65□□□□□ -1.02
KTN1-222ENST00000555506 HRCP23327 699 aa8.64□□□□□ -1.03
KTN1-222ENST00000555506 CABLES1Q8TDN4 633 aa8.64□□□□□ -1.03
KTN1-222ENST00000555506 KIFC2Q96AC6 838 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms