RNA–Protein interactions for RNA: ENST00000555470.1

PPP4R3A-209, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 595 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-209ENST00000555470 GMPRP36959 345 aa8.84□□□□□ -0.99
PPP4R3A-209ENST00000555470 SNIP1Q8TAD8 396 aaKnown RBP8.84□□□□□ -0.99
PPP4R3A-209ENST00000555470 WNT7AO00755 349 aa8.83□□□□□ -1
PPP4R3A-209ENST00000555470 PUS10Q3MIT2 529 aaKnown RBP8.83□□□□□ -1
PPP4R3A-209ENST00000555470 BCANQ96GW7 911 aa8.81□□□□□ -1
PPP4R3A-209ENST00000555470 NXF1Q9UBU9 619 aaKnown RBP8.81□□□□□ -1
PPP4R3A-209ENST00000555470 FECHP22830 423 aa8.8□□□□□ -1
PPP4R3A-209ENST00000555470 NPAS3Q8IXF0 933 aa8.8□□□□□ -1
PPP4R3A-209ENST00000555470 PXYLP1Q8TE99 480 aa8.8□□□□□ -1
PPP4R3A-209ENST00000555470 IRF7Q92985 503 aa8.8□□□□□ -1
PPP4R3A-209ENST00000555470 THAP11Q96EK4 314 aa8.8□□□□□ -1
PPP4R3A-209ENST00000555470 GNPATO15228 680 aa8.79□□□□□ -1
PPP4R3A-209ENST00000555470 J3QL48 77 aa8.78□□□□□ -1
PPP4R3A-209ENST00000555470 ZBTB24O43167 697 aaPredicted RBP8.78□□□□□ -1
PPP4R3A-209ENST00000555470 FAM160A2Q8N612 972 aaPredicted RBP8.78□□□□□ -1
PPP4R3A-209ENST00000555470 TULP1O00294 542 aaPredicted RBP8.77□□□□□ -1.01
PPP4R3A-209ENST00000555470 METTL3Q86U44 580 aaKnown RBP8.77□□□□□ -1.01
PPP4R3A-209ENST00000555470 PRKCSHP14314 528 aaPredicted RBP8.76□□□□□ -1.01
PPP4R3A-209ENST00000555470 HPS1Q92902 700 aa8.76□□□□□ -1.01
PPP4R3A-209ENST00000555470 MORN1Q5T089 497 aa8.75□□□□□ -1.01
PPP4R3A-209ENST00000555470 VSIG10Q8N0Z9 540 aa8.75□□□□□ -1.01
PPP4R3A-209ENST00000555470 MRGPRX2Q96LB1 330 aa8.75□□□□□ -1.01
PPP4R3A-209ENST00000555470 H3BM21 787 aa8.73□□□□□ -1.01
PPP4R3A-209ENST00000555470 FMNL1O95466 1100 aaPredicted RBP8.73□□□□□ -1.01
PPP4R3A-209ENST00000555470 GPIHBP1Q8IV16 184 aa8.73□□□□□ -1.01
PPP4R3A-209ENST00000555470 PRDM9Q9NQV7 894 aa8.73□□□□□ -1.01
PPP4R3A-209ENST00000555470 DAXXQ9UER7 740 aaPredicted RBP8.73□□□□□ -1.01
PPP4R3A-209ENST00000555470 TRIM32Q13049 653 aa8.72□□□□□ -1.01
PPP4R3A-209ENST00000555470 SULF1Q8IWU6 871 aa8.72□□□□□ -1.01
PPP4R3A-209ENST00000555470 PHOX2BQ99453 314 aa8.72□□□□□ -1.01
PPP4R3A-209ENST00000555470 SALL2Q9Y467 1007 aaPredicted RBP8.72□□□□□ -1.01
PPP4R3A-209ENST00000555470 RDH13Q8NBN7 331 aa8.71□□□□□ -1.02
PPP4R3A-209ENST00000555470 REPIN1Q9BWE0 567 aaKnown RBP8.71□□□□□ -1.02
PPP4R3A-209ENST00000555470 MSS51Q4VC12 460 aa8.7□□□□□ -1.02
PPP4R3A-209ENST00000555470 ERBB4Q15303 1308 aa8.7□□□□□ -1.02
PPP4R3A-209ENST00000555470 KCNMA1Q12791 1236 aa8.69□□□□□ -1.02
PPP4R3A-209ENST00000555470 DDX11L8A8MPP1 907 aa8.68□□□□□ -1.02
PPP4R3A-209ENST00000555470 ATP6V1AP38606 617 aa8.68□□□□□ -1.02
PPP4R3A-209ENST00000555470 BRICD5Q6PL45 260 aa8.68□□□□□ -1.02
PPP4R3A-209ENST00000555470 NLRP7Q8WX94 980 aa8.68□□□□□ -1.02
PPP4R3A-209ENST00000555470 SLC27A5Q9Y2P5 690 aa8.68□□□□□ -1.02
PPP4R3A-209ENST00000555470 VEGFBP49765 207 aa8.67□□□□□ -1.02
PPP4R3A-209ENST00000555470 FUT2Q10981 343 aa8.67□□□□□ -1.02
PPP4R3A-209ENST00000555470 KCTD17Q8N5Z5 321 aa8.67□□□□□ -1.02
PPP4R3A-209ENST00000555470 GSK3AP49840 483 aa8.66□□□□□ -1.02
PPP4R3A-209ENST00000555470 GRIPAP1Q4V328 841 aa8.66□□□□□ -1.02
PPP4R3A-209ENST00000555470 TRIM46Q7Z4K8 759 aa8.64□□□□□ -1.03
PPP4R3A-209ENST00000555470 GCGRP47871 477 aa8.63□□□□□ -1.03
PPP4R3A-209ENST00000555470 MMP16P51512 607 aa8.62□□□□□ -1.03
PPP4R3A-209ENST00000555470 RC3H1Q5TC82 1133 aaKnown RBP8.62□□□□□ -1.03
PPP4R3A-209ENST00000555470 BMP1P13497 986 aa8.61□□□□□ -1.03
PPP4R3A-209ENST00000555470 MAP2K5Q13163 448 aa8.61□□□□□ -1.03
PPP4R3A-209ENST00000555470 RNF19BQ6ZMZ0 732 aa8.61□□□□□ -1.03
PPP4R3A-209ENST00000555470 WNT7BP56706 349 aa8.6□□□□□ -1.03
PPP4R3A-209ENST00000555470 VSIG8P0DPA2 414 aa8.59□□□□□ -1.03
PPP4R3A-209ENST00000555470 SKOR1P84550 965 aa8.59□□□□□ -1.03
PPP4R3A-209ENST00000555470 MINK1Q8N4C8 1332 aaPredicted RBP8.58□□□□□ -1.04
PPP4R3A-209ENST00000555470 IRF6O14896 467 aa8.58□□□□□ -1.04
PPP4R3A-209ENST00000555470 ALDH1A1P00352 501 aa8.58□□□□□ -1.04
PPP4R3A-209ENST00000555470 TPRNQ4KMQ1 711 aa8.58□□□□□ -1.04
PPP4R3A-209ENST00000555470 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.58□□□□□ -1.04
PPP4R3A-209ENST00000555470 TMEM151AQ8N4L1 468 aa8.58□□□□□ -1.04
PPP4R3A-209ENST00000555470 CAPN5O15484 640 aaPredicted RBP8.57□□□□□ -1.04
PPP4R3A-209ENST00000555470 Q3C1V9 767 aa8.57□□□□□ -1.04
PPP4R3A-209ENST00000555470 DXOO77932 396 aaKnown RBP8.55□□□□□ -1.04
PPP4R3A-209ENST00000555470 KRI1Q8N9T8 703 aaKnown RBP8.54□□□□□ -1.04
PPP4R3A-209ENST00000555470 GDF11O95390 407 aa8.53□□□□□ -1.04
PPP4R3A-209ENST00000555470 CD46P15529 392 aa8.53□□□□□ -1.04
PPP4R3A-209ENST00000555470 USP46P62068 366 aa8.53□□□□□ -1.04
PPP4R3A-209ENST00000555470 RASSF7Q02833 373 aa8.53□□□□□ -1.04
PPP4R3A-209ENST00000555470 ZFP42Q96MM3 310 aa8.53□□□□□ -1.04
PPP4R3A-209ENST00000555470 ARXQ96QS3 562 aa8.53□□□□□ -1.04
PPP4R3A-209ENST00000555470 SIAH2O43255 324 aa8.52□□□□□ -1.05
PPP4R3A-209ENST00000555470 KDM4AO75164 1064 aa8.52□□□□□ -1.05
PPP4R3A-209ENST00000555470 CLCN1P35523 988 aa8.51□□□□□ -1.05
PPP4R3A-209ENST00000555470 MDM2Q00987 491 aaPredicted RBP8.51□□□□□ -1.05
PPP4R3A-209ENST00000555470 CCDC102AQ96A19 550 aa8.51□□□□□ -1.05
PPP4R3A-209ENST00000555470 GPCPD1Q9NPB8 672 aa8.5□□□□□ -1.05
PPP4R3A-209ENST00000555470 WASF2Q9Y6W5 498 aa8.5□□□□□ -1.05
PPP4R3A-209ENST00000555470 CCDC24Q8N4L8 307 aa8.49□□□□□ -1.05
PPP4R3A-209ENST00000555470 USB1Q9BQ65 265 aaKnown RBP8.49□□□□□ -1.05
PPP4R3A-209ENST00000555470 RNF225M0QZC1 329 aaPredicted RBP8.48□□□□□ -1.05
PPP4R3A-209ENST00000555470 NUTM1Q86Y26 1132 aa8.46□□□□□ -1.06
PPP4R3A-209ENST00000555470 EHBP1Q8NDI1 1231 aa8.46□□□□□ -1.06
PPP4R3A-209ENST00000555470 ZMYND10O75800 440 aa8.45□□□□□ -1.06
PPP4R3A-209ENST00000555470 XP32Q5T750 250 aa8.45□□□□□ -1.06
PPP4R3A-209ENST00000555470 TIMELESSQ9UNS1 1208 aa8.45□□□□□ -1.06
PPP4R3A-209ENST00000555470 HOXA2O43364 376 aa8.44□□□□□ -1.06
PPP4R3A-209ENST00000555470 MRPL14Q6P1L8 145 aaKnown RBP8.44□□□□□ -1.06
PPP4R3A-209ENST00000555470 BARGINQ6ZT62 677 aa8.44□□□□□ -1.06
PPP4R3A-209ENST00000555470 HLA-CQ95604 372 aa8.44□□□□□ -1.06
PPP4R3A-209ENST00000555470 FAM217BQ9NTX9 383 aaPredicted RBP8.44□□□□□ -1.06
PPP4R3A-209ENST00000555470 ZC3H15Q8WU90 426 aaKnown RBP8.43□□□□□ -1.06
PPP4R3A-209ENST00000555470 SOBPA7XYQ1 873 aa8.42□□□□□ -1.06
PPP4R3A-209ENST00000555470 IGHA1P01876 353 aa8.42□□□□□ -1.06
PPP4R3A-209ENST00000555470 SCARF1Q14162 830 aa8.42□□□□□ -1.06
PPP4R3A-209ENST00000555470 ADAMTS8Q9UP79 889 aa8.42□□□□□ -1.06
PPP4R3A-209ENST00000555470 ERICH6Q7L0X2 663 aa8.41□□□□□ -1.06
PPP4R3A-209ENST00000555470 PURBQ96QR8 312 aaKnown RBP8.4□□□□□ -1.06
PPP4R3A-209ENST00000555470 DNMT3AQ9Y6K1 912 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms