RNA–Protein interactions for RNA: ENST00000555408.5

CDK2-208, Transcript of cyclin dependent kinase 2, humanhuman

TSL 3

Gene CDK2, Length 2,598 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2-208ENST00000555408 U2AF1Q01081 240 aaKnown RBP eCLIP16.81■□□□□ 0.28
CDK2-208ENST00000555408 NLRP1Q9C000 1473 aa16.8■□□□□ 0.28
CDK2-208ENST00000555408 NGEFQ8N5V2 710 aa16.8■□□□□ 0.28
CDK2-208ENST00000555408 TBC1D32Q96NH3 1257 aa16.8■□□□□ 0.28
CDK2-208ENST00000555408 ANTXR1Q9H6X2 564 aa16.8■□□□□ 0.28
CDK2-208ENST00000555408 ABCA6Q8N139 1617 aa16.79■□□□□ 0.28
CDK2-208ENST00000555408 ZFYVE16Q7Z3T8 1539 aa16.79■□□□□ 0.28
CDK2-208ENST00000555408 SAFB2Q14151 953 aaKnown RBP eCLIP16.79■□□□□ 0.28
CDK2-208ENST00000555408 RWDD1Q9H446 243 aaPredicted RBP16.79■□□□□ 0.28
CDK2-208ENST00000555408 MFAP1P55081 439 aaKnown RBP16.79■□□□□ 0.28
CDK2-208ENST00000555408 FTSJ3Q8IY81 847 aaKnown RBP16.79■□□□□ 0.28
CDK2-208ENST00000555408 ZCCHC11Q5TAX3 1644 aaKnown RBP16.78■□□□□ 0.28
CDK2-208ENST00000555408 NINLQ9Y2I6 1382 aa16.78■□□□□ 0.28
CDK2-208ENST00000555408 NOS1P29475 1434 aa16.78■□□□□ 0.28
CDK2-208ENST00000555408 SLC24A1O60721 1099 aa16.77■□□□□ 0.27
CDK2-208ENST00000555408 WDR63Q8IWG1 891 aa16.77■□□□□ 0.27
CDK2-208ENST00000555408 MAP3K4Q9Y6R4 1608 aa16.76■□□□□ 0.27
CDK2-208ENST00000555408 RTEL1-TNFRSF6BF6WH68 1400 aa16.76■□□□□ 0.27
CDK2-208ENST00000555408 VIRMAQ69YN4 1812 aaKnown RBP16.75■□□□□ 0.27
CDK2-208ENST00000555408 U2SURPO15042 1029 aaKnown RBP16.75■□□□□ 0.27
CDK2-208ENST00000555408 MVPQ14764 893 aaKnown RBP16.75■□□□□ 0.27
CDK2-208ENST00000555408 CFAP53Q96M91 514 aa16.75■□□□□ 0.27
CDK2-208ENST00000555408 FAM43AQ8N2R8 423 aa16.75■□□□□ 0.27
CDK2-208ENST00000555408 TET3O43151 1660 aa16.75■□□□□ 0.27
CDK2-208ENST00000555408 DZIP1LQ8IYY4 767 aaKnown RBP16.74■□□□□ 0.27
CDK2-208ENST00000555408 PHF23Q9BUL5 403 aaPredicted RBP16.74■□□□□ 0.27
CDK2-208ENST00000555408 SMC4Q9NTJ3 1288 aa16.74■□□□□ 0.27
CDK2-208ENST00000555408 ZKSCAN2Q63HK3 967 aa16.74■□□□□ 0.27
CDK2-208ENST00000555408 MYH16Q9H6N6 1097 aa16.74■□□□□ 0.27
CDK2-208ENST00000555408 SHROOM2Q13796 1616 aa16.73■□□□□ 0.27
CDK2-208ENST00000555408 EXOSC9Q06265 439 aaKnown RBP16.73■□□□□ 0.27
CDK2-208ENST00000555408 GGT6Q6P531 493 aa16.73■□□□□ 0.27
CDK2-208ENST00000555408 ITPRIPQ8IWB1 547 aa16.73■□□□□ 0.27
CDK2-208ENST00000555408 SHPRHQ149N8 1683 aa16.73■□□□□ 0.27
CDK2-208ENST00000555408 CABP2Q9NPB3 220 aa16.73■□□□□ 0.27
CDK2-208ENST00000555408 RRAGDQ9NQL2 400 aaPredicted RBP16.73■□□□□ 0.27
CDK2-208ENST00000555408 C22orf23Q9BZE7 217 aa16.72■□□□□ 0.27
CDK2-208ENST00000555408 ATP7AQ04656 1500 aa16.72■□□□□ 0.27
CDK2-208ENST00000555408 FANCAO15360 1455 aa16.71■□□□□ 0.27
CDK2-208ENST00000555408 MYOM2P54296 1465 aa16.71■□□□□ 0.26
CDK2-208ENST00000555408 IQSEC2Q5JU85 1478 aa16.71■□□□□ 0.26
CDK2-208ENST00000555408 KIAA1210Q9ULL0 1709 aa16.7■□□□□ 0.26
CDK2-208ENST00000555408 CFAP65Q6ZU64 1925 aaKnown RBP16.7■□□□□ 0.26
CDK2-208ENST00000555408 TRIM27P14373 513 aa16.7■□□□□ 0.26
CDK2-208ENST00000555408 DEPDC5O75140 1603 aa16.7■□□□□ 0.26
CDK2-208ENST00000555408 PANK2Q9BZ23 570 aa16.7■□□□□ 0.26
CDK2-208ENST00000555408 MROH2AA6NES4 1674 aa16.69■□□□□ 0.26
CDK2-208ENST00000555408 SSH1Q8WYL5 1049 aa16.69■□□□□ 0.26
CDK2-208ENST00000555408 MCM4P33991 863 aa16.69■□□□□ 0.26
CDK2-208ENST00000555408 GGNBP2Q9H3C7 697 aa16.69■□□□□ 0.26
CDK2-208ENST00000555408 C14orf93Q9H972 538 aaKnown RBP16.69■□□□□ 0.26
CDK2-208ENST00000555408 ZNF518AQ6AHZ1 1483 aa16.68■□□□□ 0.26
CDK2-208ENST00000555408 XRCC6P12956 609 aaKnown RBP eCLIP16.68■□□□□ 0.262e-7■■□□□ 13.8
CDK2-208ENST00000555408 NOB1Q9ULX3 412 aaKnown RBP16.68■□□□□ 0.26
CDK2-208ENST00000555408 CCDC27Q2M243 656 aa16.68■□□□□ 0.26
CDK2-208ENST00000555408 L1TD1Q5T7N2 865 aaKnown RBP16.68■□□□□ 0.26
CDK2-208ENST00000555408 STK26Q9P289 416 aa16.68■□□□□ 0.26
CDK2-208ENST00000555408 ADGRL1O94910 1474 aa16.67■□□□□ 0.26
CDK2-208ENST00000555408 GOLGA6L3A6NEY3 463 aa16.67■□□□□ 0.26
CDK2-208ENST00000555408 KIF1BO60333 1816 aa16.67■□□□□ 0.26
CDK2-208ENST00000555408 AAMPQ13685 434 aa16.67■□□□□ 0.26
CDK2-208ENST00000555408 VWDEQ8N2E2 1590 aa16.66■□□□□ 0.26
CDK2-208ENST00000555408 SBNO2Q9Y2G9 1366 aa16.66■□□□□ 0.26
CDK2-208ENST00000555408 TMEM57Q8N5G2 664 aa16.66■□□□□ 0.26
CDK2-208ENST00000555408 TMPOP42166 694 aaKnown RBP16.64■□□□□ 0.25
CDK2-208ENST00000555408 LNPKQ9C0E8 428 aa16.64■□□□□ 0.25
CDK2-208ENST00000555408 TRIM35Q9UPQ4 493 aa16.64■□□□□ 0.25
CDK2-208ENST00000555408 MROH1Q8NDA8 1641 aa16.64■□□□□ 0.25
CDK2-208ENST00000555408 TRAK2O60296 914 aa16.64■□□□□ 0.25
CDK2-208ENST00000555408 ATF7IPQ6VMQ6 1270 aa16.64■□□□□ 0.25
CDK2-208ENST00000555408 RSPH6AQ9H0K4 717 aa16.63■□□□□ 0.25
CDK2-208ENST00000555408 CHMP5Q9NZZ3 219 aa16.63■□□□□ 0.25
CDK2-208ENST00000555408 EVC2Q86UK5 1308 aa16.63■□□□□ 0.25
CDK2-208ENST00000555408 SRPK2P78362 688 aaKnown RBP16.63■□□□□ 0.25
CDK2-208ENST00000555408 FOXD4L1Q9NU39 408 aa16.63■□□□□ 0.25
CDK2-208ENST00000555408 INO80Q9ULG1 1556 aaPredicted RBP16.62■□□□□ 0.25
CDK2-208ENST00000555408 DDX19BQ9UMR2 479 aa16.62■□□□□ 0.25
CDK2-208ENST00000555408 PPRC1Q5VV67 1664 aaKnown RBP16.62■□□□□ 0.25
CDK2-208ENST00000555408 QRICH2Q9H0J4 1663 aa16.62■□□□□ 0.25
CDK2-208ENST00000555408 RIPK4P57078 832 aa16.62■□□□□ 0.25
CDK2-208ENST00000555408 HSCBQ8IWL3 235 aa16.62■□□□□ 0.25
CDK2-208ENST00000555408 EFCAB6Q5THR3 1501 aa16.62■□□□□ 0.25
CDK2-208ENST00000555408 NRXN1Q9ULB1 1477 aa16.62■□□□□ 0.25
CDK2-208ENST00000555408 CD109Q6YHK3 1445 aa16.61■□□□□ 0.25
CDK2-208ENST00000555408 FBLN1P23142 703 aa16.61■□□□□ 0.25
CDK2-208ENST00000555408 PLEKHF1Q96S99 279 aa16.61■□□□□ 0.25
CDK2-208ENST00000555408 UHRF1BP1LA0JNW5 1464 aa16.6■□□□□ 0.25
CDK2-208ENST00000555408 MYO3AQ8NEV4 1616 aa16.6■□□□□ 0.25
CDK2-208ENST00000555408 HDAC1Q13547 482 aaPredicted RBP16.6■□□□□ 0.25
CDK2-208ENST00000555408 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
CDK2-208ENST00000555408 C1orf115Q9H7X2 142 aa16.59■□□□□ 0.25
CDK2-208ENST00000555408 NPATQ14207 1427 aa16.59■□□□□ 0.25
CDK2-208ENST00000555408 ANKRD36BQ8N2N9 1353 aa16.58■□□□□ 0.25
CDK2-208ENST00000555408 FSD2A1L4K1 749 aa16.58■□□□□ 0.24
CDK2-208ENST00000555408 SMC5Q8IY18 1101 aa16.57■□□□□ 0.24
CDK2-208ENST00000555408 ZBTB40Q9NUA8 1239 aa16.57■□□□□ 0.24
CDK2-208ENST00000555408 MINK1Q8N4C8 1332 aaPredicted RBP16.57■□□□□ 0.24
CDK2-208ENST00000555408 ADGRB1O14514 1584 aa16.57■□□□□ 0.24
CDK2-208ENST00000555408 ZMYM3Q14202 1370 aa16.57■□□□□ 0.24
CDK2-208ENST00000555408 ADGRB3O60242 1522 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms