RNA–Protein interactions for RNA: ENST00000555314.1

TMEM253-205, Transcript of transmembrane protein 253, humanhuman

TSL 3

Gene TMEM253, Length 605 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-205ENST00000555314 ATAD2Q6PL18 1390 aa18.87■□□□□ 0.61
TMEM253-205ENST00000555314 NPHP3Q7Z494 1330 aa18.87■□□□□ 0.61
TMEM253-205ENST00000555314 USP21Q9UK80 565 aa18.87■□□□□ 0.61
TMEM253-205ENST00000555314 SLC4A1APQ9BWU0 796 aaKnown RBP18.86■□□□□ 0.61
TMEM253-205ENST00000555314 PPARGC1BQ86YN6 1023 aaKnown RBP18.85■□□□□ 0.61
TMEM253-205ENST00000555314 KIF1BO60333 1816 aa18.84■□□□□ 0.61
TMEM253-205ENST00000555314 SRCAPQ6ZRS2 3230 aa18.83■□□□□ 0.61
TMEM253-205ENST00000555314 ATRNO75882 1429 aa18.83■□□□□ 0.6
TMEM253-205ENST00000555314 LRPPRCP42704 1394 aaKnown RBP18.82■□□□□ 0.6
TMEM253-205ENST00000555314 CCDC125Q86Z20 511 aa18.82■□□□□ 0.6
TMEM253-205ENST00000555314 MYOM2P54296 1465 aa18.82■□□□□ 0.6
TMEM253-205ENST00000555314 ESCO1Q5FWF5 840 aa18.81■□□□□ 0.6
TMEM253-205ENST00000555314 TECPR2O15040 1411 aa18.81■□□□□ 0.6
TMEM253-205ENST00000555314 CDC42BPGQ6DT37 1551 aa18.81■□□□□ 0.6
TMEM253-205ENST00000555314 ABCC11Q96J66 1382 aa18.8■□□□□ 0.6
TMEM253-205ENST00000555314 ANKRD30BQ9BXX2 1392 aa18.8■□□□□ 0.6
TMEM253-205ENST00000555314 COL22A1Q8NFW1 1626 aaPredicted RBP18.79■□□□□ 0.6
TMEM253-205ENST00000555314 PXDNQ92626 1479 aa18.77■□□□□ 0.6
TMEM253-205ENST00000555314 FOXO3O43524 673 aa18.77■□□□□ 0.6
TMEM253-205ENST00000555314 SIRT1Q96EB6 747 aa18.77■□□□□ 0.6
TMEM253-205ENST00000555314 BCL9LQ86UU0 1499 aa18.77■□□□□ 0.59
TMEM253-205ENST00000555314 CCDC144AA2RUR9 1427 aa18.76■□□□□ 0.59
TMEM253-205ENST00000555314 ADGRF5Q8IZF2 1346 aa18.75■□□□□ 0.59
TMEM253-205ENST00000555314 ACIN1Q9UKV3 1341 aaKnown RBP18.74■□□□□ 0.59
TMEM253-205ENST00000555314 SPATA31E1Q6ZUB1 1445 aa18.74■□□□□ 0.59
TMEM253-205ENST00000555314 GJD4Q96KN9 370 aaPredicted RBP18.74■□□□□ 0.59
TMEM253-205ENST00000555314 ZRANB1Q9UGI0 708 aa18.74■□□□□ 0.59
TMEM253-205ENST00000555314 PPLO60437 1756 aa18.73■□□□□ 0.59
TMEM253-205ENST00000555314 WAPLQ7Z5K2 1190 aa18.72■□□□□ 0.59
TMEM253-205ENST00000555314 SPATA31A3Q5VYP0 1347 aa18.72■□□□□ 0.59
TMEM253-205ENST00000555314 NCBP3Q53F19 620 aaKnown RBP18.71■□□□□ 0.59
TMEM253-205ENST00000555314 STK26Q9P289 416 aa18.71■□□□□ 0.59
TMEM253-205ENST00000555314 PIK3C2GO75747 1445 aa18.7■□□□□ 0.58
TMEM253-205ENST00000555314 RGL3Q3MIN7 710 aa18.7■□□□□ 0.58
TMEM253-205ENST00000555314 UNC5CLQ8IV45 518 aa18.7■□□□□ 0.58
TMEM253-205ENST00000555314 XPCQ01831 940 aaPredicted RBP18.69■□□□□ 0.58
TMEM253-205ENST00000555314 MPHOSPH9Q99550 1183 aa18.68■□□□□ 0.58
TMEM253-205ENST00000555314 SLIT2O94813 1529 aa18.68■□□□□ 0.58
TMEM253-205ENST00000555314 EP400Q96L91 3159 aa18.67■□□□□ 0.58
TMEM253-205ENST00000555314 YTHDC2Q9H6S0 1430 aaKnown RBP18.67■□□□□ 0.58
TMEM253-205ENST00000555314 C14orf93Q9H972 538 aaKnown RBP18.67■□□□□ 0.58
TMEM253-205ENST00000555314 TMEM132EQ6IEE7 984 aa18.66■□□□□ 0.58
TMEM253-205ENST00000555314 KRT28Q7Z3Y7 464 aa18.66■□□□□ 0.58
TMEM253-205ENST00000555314 PLEKHH1Q9ULM0 1364 aa18.66■□□□□ 0.58
TMEM253-205ENST00000555314 PSME1Q06323 249 aa18.65■□□□□ 0.58
TMEM253-205ENST00000555314 NUTM2FA1L443 756 aa18.64■□□□□ 0.57
TMEM253-205ENST00000555314 BLMP54132 1417 aaPredicted RBP18.64■□□□□ 0.57
TMEM253-205ENST00000555314 ONECUT3O60422 494 aaPredicted RBP18.63■□□□□ 0.57
TMEM253-205ENST00000555314 PHF8Q9UPP1 1060 aa18.63■□□□□ 0.57
TMEM253-205ENST00000555314 SBNO1A3KN83 1393 aa18.63■□□□□ 0.57
TMEM253-205ENST00000555314 RALGAPBQ86X10 1494 aa18.63■□□□□ 0.57
TMEM253-205ENST00000555314 VPS72Q15906 364 aa18.62■□□□□ 0.57
TMEM253-205ENST00000555314 DHX57Q6P158 1386 aaKnown RBP18.62■□□□□ 0.57
TMEM253-205ENST00000555314 KNDC1Q76NI1 1749 aa18.61■□□□□ 0.57
TMEM253-205ENST00000555314 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.61■□□□□ 0.57
TMEM253-205ENST00000555314 KIF1AQ12756 1690 aa18.61■□□□□ 0.57
TMEM253-205ENST00000555314 NRXN1Q9ULB1 1477 aa18.61■□□□□ 0.57
TMEM253-205ENST00000555314 TNS3Q68CZ2 1445 aa18.61■□□□□ 0.57
TMEM253-205ENST00000555314 ARHGEF10O15013 1369 aa18.6■□□□□ 0.57
TMEM253-205ENST00000555314 FMN2Q9NZ56 1722 aa18.59■□□□□ 0.57
TMEM253-205ENST00000555314 MARF1Q9Y4F3 1742 aaKnown RBP18.59■□□□□ 0.57
TMEM253-205ENST00000555314 HAP1P54257 671 aaPredicted RBP18.58■□□□□ 0.56
TMEM253-205ENST00000555314 ANKARQ7Z5J8 1434 aa18.57■□□□□ 0.56
TMEM253-205ENST00000555314 GLI3P10071 1580 aa18.57■□□□□ 0.56
TMEM253-205ENST00000555314 SEPT12Q8IYM1 358 aa18.57■□□□□ 0.56
TMEM253-205ENST00000555314 IFT172Q9UG01 1749 aa18.57■□□□□ 0.56
TMEM253-205ENST00000555314 USP32Q8NFA0 1604 aa18.56■□□□□ 0.56
TMEM253-205ENST00000555314 SF3B2Q13435 895 aaKnown RBP18.56■□□□□ 0.56
TMEM253-205ENST00000555314 CFAP70Q5T0N1 1121 aa18.55■□□□□ 0.56
TMEM253-205ENST00000555314 PRAM1Q96QH2 718 aa18.55■□□□□ 0.56
TMEM253-205ENST00000555314 CABLES1Q8TDN4 633 aa18.53■□□□□ 0.56
TMEM253-205ENST00000555314 STAC3Q96MF2 364 aa18.53■□□□□ 0.56
TMEM253-205ENST00000555314 DLC1Q96QB1 1528 aa18.53■□□□□ 0.56
TMEM253-205ENST00000555314 KRT27Q7Z3Y8 459 aa18.52■□□□□ 0.56
TMEM253-205ENST00000555314 EIF3AQ14152 1382 aaKnown RBP18.52■□□□□ 0.55
TMEM253-205ENST00000555314 FAM83GA6ND36 823 aa18.51■□□□□ 0.55
TMEM253-205ENST00000555314 POGKQ9P215 609 aa18.51■□□□□ 0.55
TMEM253-205ENST00000555314 CCDC9Q9Y3X0 531 aaKnown RBP18.5■□□□□ 0.55
TMEM253-205ENST00000555314 LMOD2Q6P5Q4 547 aa18.49■□□□□ 0.55
TMEM253-205ENST00000555314 DEFB132Q7Z7B7 95 aa18.49■□□□□ 0.55
TMEM253-205ENST00000555314 GPRASP1Q5JY77 1395 aa18.49■□□□□ 0.55
TMEM253-205ENST00000555314 NWD2Q9ULI1 1742 aa18.49■□□□□ 0.55
TMEM253-205ENST00000555314 SAFB2Q14151 953 aaKnown RBP eCLIP18.47■□□□□ 0.55
TMEM253-205ENST00000555314 ADGRB2O60241 1585 aa18.47■□□□□ 0.55
TMEM253-205ENST00000555314 BAG6P46379 1132 aa18.46■□□□□ 0.55
TMEM253-205ENST00000555314 PMFBP1Q8TBY8 1022 aa18.46■□□□□ 0.55
TMEM253-205ENST00000555314 ADGRB1O14514 1584 aa18.44■□□□□ 0.54
TMEM253-205ENST00000555314 BTG4Q9NY30 223 aa18.44■□□□□ 0.54
TMEM253-205ENST00000555314 WASLO00401 505 aaPredicted RBP18.43■□□□□ 0.54
TMEM253-205ENST00000555314 FAM98CQ17RN3 349 aaKnown RBP18.42■□□□□ 0.54
TMEM253-205ENST00000555314 TRAK1Q9UPV9 953 aa18.42■□□□□ 0.54
TMEM253-205ENST00000555314 SPATA31A5Q5VU36 1347 aa18.42■□□□□ 0.54
TMEM253-205ENST00000555314 SPATA31A7Q8IWB4 1347 aa18.42■□□□□ 0.54
TMEM253-205ENST00000555314 PRR36Q9H6K5 1346 aa18.41■□□□□ 0.54
TMEM253-205ENST00000555314 PLCH1Q4KWH8 1693 aa18.41■□□□□ 0.54
TMEM253-205ENST00000555314 TULP4Q9NRJ4 1543 aa18.4■□□□□ 0.54
TMEM253-205ENST00000555314 A0A0G2JS52 829 aa18.4■□□□□ 0.54
TMEM253-205ENST00000555314 MYT1Q01538 1121 aa18.4■□□□□ 0.54
TMEM253-205ENST00000555314 BRWD3Q6RI45 1802 aa18.39■□□□□ 0.54
TMEM253-205ENST00000555314 NGDNQ8NEJ9 315 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms