RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 POTEAQ6S8J7 498 aa24.63■■□□□ 1.53
PSEN1-212ENST00000555254 CADPS2Q86UW7 1296 aa24.63■■□□□ 1.53
PSEN1-212ENST00000555254 GPRASP1Q5JY77 1395 aa24.63■■□□□ 1.53
PSEN1-212ENST00000555254 YTHDC2Q9H6S0 1430 aaKnown RBP24.62■■□□□ 1.53
PSEN1-212ENST00000555254 ABCC11Q96J66 1382 aa24.62■■□□□ 1.53
PSEN1-212ENST00000555254 PTCH1Q13635 1447 aa24.61■■□□□ 1.53
PSEN1-212ENST00000555254 TRPM1Q7Z4N2 1603 aa24.61■■□□□ 1.53
PSEN1-212ENST00000555254 ASXL1Q8IXJ9 1541 aa24.6■■□□□ 1.53
PSEN1-212ENST00000555254 TRAK1Q9UPV9 953 aa24.59■■□□□ 1.53
PSEN1-212ENST00000555254 SAFB2Q14151 953 aaKnown RBP eCLIP24.57■■□□□ 1.52
PSEN1-212ENST00000555254 ADGRL3Q9HAR2 1447 aa24.57■■□□□ 1.52
PSEN1-212ENST00000555254 PLEKHH1Q9ULM0 1364 aa24.56■■□□□ 1.52
PSEN1-212ENST00000555254 POGKQ9P215 609 aa24.56■■□□□ 1.52
PSEN1-212ENST00000555254 PRAM1Q96QH2 718 aa24.55■■□□□ 1.52
PSEN1-212ENST00000555254 LAMC1P11047 1609 aa24.54■■□□□ 1.52
PSEN1-212ENST00000555254 TECPR2O15040 1411 aa24.54■■□□□ 1.52
PSEN1-212ENST00000555254 FAM135BQ49AJ0 1406 aa24.54■■□□□ 1.52
PSEN1-212ENST00000555254 SIRT1Q96EB6 747 aa24.54■■□□□ 1.52
PSEN1-212ENST00000555254 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.54■■□□□ 1.52
PSEN1-212ENST00000555254 KIAA1210Q9ULL0 1709 aa24.53■■□□□ 1.52
PSEN1-212ENST00000555254 ST20-MTHFSA0A0A6YYL1 179 aa24.53■■□□□ 1.52
PSEN1-212ENST00000555254 EIF3AQ14152 1382 aaKnown RBP24.51■■□□□ 1.51
PSEN1-212ENST00000555254 DCCP43146 1447 aa24.51■■□□□ 1.51
PSEN1-212ENST00000555254 ADGRB1O14514 1584 aa24.5■■□□□ 1.51
PSEN1-212ENST00000555254 NUTM2FA1L443 756 aa24.48■■□□□ 1.51
PSEN1-212ENST00000555254 SLC24A1O60721 1099 aa24.48■■□□□ 1.51
PSEN1-212ENST00000555254 DDX10Q13206 875 aaKnown RBP24.47■■□□□ 1.51
PSEN1-212ENST00000555254 BRINP3Q76B58 766 aa24.47■■□□□ 1.51
PSEN1-212ENST00000555254 NALCNQ8IZF0 1738 aa24.47■■□□□ 1.51
PSEN1-212ENST00000555254 MST1RQ04912 1400 aa24.46■■□□□ 1.51
PSEN1-212ENST00000555254 ROBO1Q9Y6N7 1651 aa24.45■■□□□ 1.5
PSEN1-212ENST00000555254 CCDC7Q96M83 1385 aa24.43■■□□□ 1.5
PSEN1-212ENST00000555254 MINK1Q8N4C8 1332 aaPredicted RBP24.43■■□□□ 1.5
PSEN1-212ENST00000555254 SRCAPQ6ZRS2 3230 aa24.43■■□□□ 1.5
PSEN1-212ENST00000555254 KNDC1Q76NI1 1749 aa24.43■■□□□ 1.5
PSEN1-212ENST00000555254 WASHC2AQ641Q2 1341 aa24.42■■□□□ 1.5
PSEN1-212ENST00000555254 ORAI2Q96SN7 254 aa24.42■■□□□ 1.5
PSEN1-212ENST00000555254 DLC1Q96QB1 1528 aa24.41■■□□□ 1.5
PSEN1-212ENST00000555254 C1orf167Q5SNV9 1468 aa24.41■■□□□ 1.5
PSEN1-212ENST00000555254 TMF1P82094 1093 aa24.41■■□□□ 1.5
PSEN1-212ENST00000555254 POLR3GLQ9BT43 218 aa24.41■■□□□ 1.5
PSEN1-212ENST00000555254 ESCO1Q5FWF5 840 aa24.4■■□□□ 1.5
PSEN1-212ENST00000555254 C11orf95C9JLR9 678 aaPredicted RBP24.39■■□□□ 1.49
PSEN1-212ENST00000555254 DDX17Q92841 729 aaKnown RBP24.39■■□□□ 1.49
PSEN1-212ENST00000555254 KIF7Q2M1P5 1343 aa24.38■■□□□ 1.49
PSEN1-212ENST00000555254 CDCA8Q53HL2 280 aa24.38■■□□□ 1.49
PSEN1-212ENST00000555254 CENPJQ9HC77 1338 aaPredicted RBP24.35■■□□□ 1.49
PSEN1-212ENST00000555254 CDC42BPGQ6DT37 1551 aa24.35■■□□□ 1.49
PSEN1-212ENST00000555254 TESK2Q96S53 571 aa24.35■■□□□ 1.49
PSEN1-212ENST00000555254 UPF1Q92900 1129 aaKnown RBP eCLIP24.34■■□□□ 1.49
PSEN1-212ENST00000555254 WASLO00401 505 aaPredicted RBP24.32■■□□□ 1.48
PSEN1-212ENST00000555254 PHLPP1O60346 1717 aa24.3■■□□□ 1.48
PSEN1-212ENST00000555254 FOXO3O43524 673 aa24.29■■□□□ 1.48
PSEN1-212ENST00000555254 XPCQ01831 940 aaPredicted RBP24.28■■□□□ 1.48
PSEN1-212ENST00000555254 CDK19Q9BWU1 502 aa24.28■■□□□ 1.48
PSEN1-212ENST00000555254 PHF8Q9UPP1 1060 aa24.27■■□□□ 1.48
PSEN1-212ENST00000555254 AHDC1Q5TGY3 1603 aaPredicted RBP24.26■■□□□ 1.47
PSEN1-212ENST00000555254 LRRC59Q96AG4 307 aaKnown RBP24.26■■□□□ 1.47
PSEN1-212ENST00000555254 ARHGEF28Q8N1W1 1705 aaKnown RBP24.26■■□□□ 1.47
PSEN1-212ENST00000555254 JCADQ9P266 1359 aa24.26■■□□□ 1.47
PSEN1-212ENST00000555254 ANP32CO43423 234 aa24.25■■□□□ 1.47
PSEN1-212ENST00000555254 PMFBP1Q8TBY8 1022 aa24.25■■□□□ 1.47
PSEN1-212ENST00000555254 SBNO2Q9Y2G9 1366 aa24.25■■□□□ 1.47
PSEN1-212ENST00000555254 FMN2Q9NZ56 1722 aa24.24■■□□□ 1.47
PSEN1-212ENST00000555254 NPHP3Q7Z494 1330 aa24.24■■□□□ 1.47
PSEN1-212ENST00000555254 MIER1Q8N108 512 aa24.23■■□□□ 1.47
PSEN1-212ENST00000555254 PRR36Q9H6K5 1346 aa24.23■■□□□ 1.47
PSEN1-212ENST00000555254 SRPK2P78362 688 aaKnown RBP24.22■■□□□ 1.47
PSEN1-212ENST00000555254 NUDT16Q96DE0 195 aaKnown RBP24.22■■□□□ 1.47
PSEN1-212ENST00000555254 COL16A1Q07092 1604 aaPredicted RBP24.21■■□□□ 1.47
PSEN1-212ENST00000555254 ADGRB2O60241 1585 aa24.21■■□□□ 1.47
PSEN1-212ENST00000555254 SOS2Q07890 1332 aaPredicted RBP24.21■■□□□ 1.47
PSEN1-212ENST00000555254 ANKARQ7Z5J8 1434 aa24.2■■□□□ 1.46
PSEN1-212ENST00000555254 EVC2Q86UK5 1308 aa24.2■■□□□ 1.46
PSEN1-212ENST00000555254 NUTM2BA6NNL0 878 aaPredicted RBP24.2■■□□□ 1.46
PSEN1-212ENST00000555254 NUTM2EB1AL46 878 aaPredicted RBP24.2■■□□□ 1.46
PSEN1-212ENST00000555254 PSME1Q06323 249 aa24.2■■□□□ 1.46
PSEN1-212ENST00000555254 KRT28Q7Z3Y7 464 aa24.2■■□□□ 1.46
PSEN1-212ENST00000555254 NUTM2AQ8IVF1 878 aaPredicted RBP24.2■■□□□ 1.46
PSEN1-212ENST00000555254 CABP2Q9NPB3 220 aa24.2■■□□□ 1.46
PSEN1-212ENST00000555254 NHSL1Q5SYE7 1610 aa24.17■■□□□ 1.46
PSEN1-212ENST00000555254 NGDNQ8NEJ9 315 aaKnown RBP24.17■■□□□ 1.46
PSEN1-212ENST00000555254 TULP4Q9NRJ4 1543 aa24.16■■□□□ 1.46
PSEN1-212ENST00000555254 PUS7Q96PZ0 661 aaKnown RBP24.16■■□□□ 1.46
PSEN1-212ENST00000555254 SPATA31A6Q5VVP1 1343 aa24.14■■□□□ 1.46
PSEN1-212ENST00000555254 MEX3CQ5U5Q3 659 aaKnown RBP24.14■■□□□ 1.45
PSEN1-212ENST00000555254 CCDC61Q9Y6R9 512 aa24.14■■□□□ 1.45
PSEN1-212ENST00000555254 LMOD2Q6P5Q4 547 aa24.13■■□□□ 1.45
PSEN1-212ENST00000555254 USP32Q8NFA0 1604 aa24.13■■□□□ 1.45
PSEN1-212ENST00000555254 PLEKHG5O94827 1062 aa24.12■■□□□ 1.45
PSEN1-212ENST00000555254 PNPLA6Q8IY17 1366 aa24.12■■□□□ 1.45
PSEN1-212ENST00000555254 PXDNQ92626 1479 aa24.12■■□□□ 1.45
PSEN1-212ENST00000555254 QRICH2Q9H0J4 1663 aa24.11■■□□□ 1.45
PSEN1-212ENST00000555254 RGPD8O14715 1765 aaPredicted RBP24.11■■□□□ 1.45
PSEN1-212ENST00000555254 ATP7BP35670 1465 aa24.1■■□□□ 1.45
PSEN1-212ENST00000555254 KIF1AQ12756 1690 aa24.09■■□□□ 1.45
PSEN1-212ENST00000555254 PANK3Q9H999 370 aa24.09■■□□□ 1.45
PSEN1-212ENST00000555254 PAK3O75914 559 aaPredicted RBP24.08■■□□□ 1.45
PSEN1-212ENST00000555254 SPATA31A3Q5VYP0 1347 aa24.08■■□□□ 1.44
PSEN1-212ENST00000555254 CABP1Q9NZU7 370 aa24.07■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms