RNA–Protein interactions for RNA: ENST00000555117.1

COCH-208, Transcript of cochlin, human

TSL 2

Gene COCH, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COCH-208	ENST00000555117	ORAI2	Q96SN7	254 aa		32.71	■■■□□ 2.83
COCH-208	ENST00000555117	MYOM2	P54296	1465 aa		32.71	■■■□□ 2.83
COCH-208	ENST00000555117	ABCC11	Q96J66	1382 aa		32.69	■■■□□ 2.82
COCH-208	ENST00000555117	NRXN1	Q9ULB1	1477 aa		32.68	■■■□□ 2.82
COCH-208	ENST00000555117	PNPLA6	Q8IY17	1366 aa		32.68	■■■□□ 2.82
COCH-208	ENST00000555117	WAPL	Q7Z5K2	1190 aa		32.67	■■■□□ 2.82
COCH-208	ENST00000555117	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.67	■■■□□ 2.82
COCH-208	ENST00000555117	HRC	P23327	699 aa		32.66	■■■□□ 2.82
COCH-208	ENST00000555117	ZNF772	Q68DY9	489 aa	Predicted RBP	32.65	■■■□□ 2.82
COCH-208	ENST00000555117	PLEKHH1	Q9ULM0	1364 aa		32.63	■■■□□ 2.81
COCH-208	ENST00000555117	C14orf93	Q9H972	538 aa	Known RBP	32.63	■■■□□ 2.81
COCH-208	ENST00000555117	SOS2	Q07890	1332 aa	Predicted RBP	32.62	■■■□□ 2.81
COCH-208	ENST00000555117	TRIM26	Q12899	539 aa	Predicted RBP	32.62	■■■□□ 2.81
COCH-208	ENST00000555117	FMN2	Q9NZ56	1722 aa		32.6	■■■□□ 2.81
COCH-208	ENST00000555117	ESCO1	Q5FWF5	840 aa		32.59	■■■□□ 2.81
COCH-208	ENST00000555117	CFAP70	Q5T0N1	1121 aa		32.59	■■■□□ 2.81
COCH-208	ENST00000555117	DHX57	Q6P158	1386 aa	Known RBP	32.56	■■■□□ 2.8
COCH-208	ENST00000555117	AFF2	P51816	1311 aa		32.55	■■■□□ 2.8
COCH-208	ENST00000555117	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.55	■■■□□ 2.8
COCH-208	ENST00000555117	NUTM2F	A1L443	756 aa		32.54	■■■□□ 2.8
COCH-208	ENST00000555117	NPHP3	Q7Z494	1330 aa		32.53	■■■□□ 2.8
COCH-208	ENST00000555117	SIRT1	Q96EB6	747 aa		32.53	■■■□□ 2.8
COCH-208	ENST00000555117	C8orf37	Q96NL8	207 aa		32.52	■■■□□ 2.8
COCH-208	ENST00000555117	PXDN	Q92626	1479 aa		32.52	■■■□□ 2.8
COCH-208	ENST00000555117	RGPD8	O14715	1765 aa	Predicted RBP	32.5	■■■□□ 2.79
COCH-208	ENST00000555117	KIF1A	Q12756	1690 aa		32.5	■■■□□ 2.79
COCH-208	ENST00000555117	ADGRB1	O14514	1584 aa		32.48	■■■□□ 2.79
COCH-208	ENST00000555117	DLC1	Q96QB1	1528 aa		32.47	■■■□□ 2.79
COCH-208	ENST00000555117	FOXO3	O43524	673 aa		32.47	■■■□□ 2.79
COCH-208	ENST00000555117	ADAMTS2	O95450	1211 aa		32.47	■■■□□ 2.79
COCH-208	ENST00000555117	RXRB	P28702	533 aa		32.47	■■■□□ 2.79
COCH-208	ENST00000555117	XPC	Q01831	940 aa	Predicted RBP	32.45	■■■□□ 2.79
COCH-208	ENST00000555117	DCAF11	Q8TEB1	546 aa		32.45	■■■□□ 2.79
COCH-208	ENST00000555117	PRAM1	Q96QH2	718 aa		32.45	■■■□□ 2.79
COCH-208	ENST00000555117	KDM2A	Q9Y2K7	1162 aa		32.44	■■■□□ 2.78
COCH-208	ENST00000555117	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.42	■■■□□ 2.78
COCH-208	ENST00000555117	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.42	■■■□□ 2.78
COCH-208	ENST00000555117	MARF1	Q9Y4F3	1742 aa	Known RBP	32.41	■■■□□ 2.78
COCH-208	ENST00000555117	NGLY1	Q96IV0	654 aa		32.41	■■■□□ 2.78
COCH-208	ENST00000555117	POGK	Q9P215	609 aa		32.39	■■■□□ 2.78
COCH-208	ENST00000555117	ADGRB2	O60241	1585 aa		32.39	■■■□□ 2.78
COCH-208	ENST00000555117	STAC3	Q96MF2	364 aa		32.37	■■■□□ 2.77
COCH-208	ENST00000555117	QTRT2	Q9H974	415 aa	Known RBP	32.37	■■■□□ 2.77
COCH-208	ENST00000555117	TRAK1	Q9UPV9	953 aa		32.35	■■■□□ 2.77
COCH-208	ENST00000555117	USP32	Q8NFA0	1604 aa		32.35	■■■□□ 2.77
COCH-208	ENST00000555117	RBM6	P78332	1123 aa	Known RBP	32.33	■■■□□ 2.77
COCH-208	ENST00000555117	PHF8	Q9UPP1	1060 aa		32.32	■■■□□ 2.76
COCH-208	ENST00000555117	USP21	Q9UK80	565 aa		32.31	■■■□□ 2.76
COCH-208	ENST00000555117	RGS12	O14924	1447 aa		32.31	■■■□□ 2.76
COCH-208	ENST00000555117	SPATA31A3	Q5VYP0	1347 aa		32.3	■■■□□ 2.76
COCH-208	ENST00000555117	KRT28	Q7Z3Y7	464 aa		32.3	■■■□□ 2.76
COCH-208	ENST00000555117	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.3	■■■□□ 2.76
COCH-208	ENST00000555117	ANKAR	Q7Z5J8	1434 aa		32.29	■■■□□ 2.76
COCH-208	ENST00000555117	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.29	■■■□□ 2.76
COCH-208	ENST00000555117	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.26	■■■□□ 2.75
COCH-208	ENST00000555117	TNS3	Q68CZ2	1445 aa		32.26	■■■□□ 2.75
COCH-208	ENST00000555117	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.25	■■■□□ 2.75
COCH-208	ENST00000555117	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.25	■■■□□ 2.75
COCH-208	ENST00000555117	TRPC5	Q9UL62	973 aa	Predicted RBP	32.24	■■■□□ 2.75
COCH-208	ENST00000555117	KIAA1210	Q9ULL0	1709 aa		32.23	■■■□□ 2.75
COCH-208	ENST00000555117	PSME1	Q06323	249 aa		32.23	■■■□□ 2.75
COCH-208	ENST00000555117	ATRN	O75882	1429 aa		32.23	■■■□□ 2.75
COCH-208	ENST00000555117	TULP4	Q9NRJ4	1543 aa		32.22	■■■□□ 2.75
COCH-208	ENST00000555117	EIF3A	Q14152	1382 aa	Known RBP	32.21	■■■□□ 2.75
COCH-208	ENST00000555117	PMFBP1	Q8TBY8	1022 aa		32.21	■■■□□ 2.75
COCH-208	ENST00000555117	ABCA3	Q99758	1704 aa		32.2	■■■□□ 2.75
COCH-208	ENST00000555117	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	32.2	■■■□□ 2.75
COCH-208	ENST00000555117	BCL9L	Q86UU0	1499 aa		32.2	■■■□□ 2.75
COCH-208	ENST00000555117	SBNO1	A3KN83	1393 aa		32.19	■■■□□ 2.74
COCH-208	ENST00000555117	TRPM3	Q9HCF6	1732 aa	Predicted RBP	32.17	■■■□□ 2.74
COCH-208	ENST00000555117	WASL	O00401	505 aa	Predicted RBP	32.16	■■■□□ 2.74
COCH-208	ENST00000555117	PRR36	Q9H6K5	1346 aa		32.16	■■■□□ 2.74
COCH-208	ENST00000555117	ITSN1	Q15811	1721 aa		32.15	■■■□□ 2.74
COCH-208	ENST00000555117	PCGF6	Q9BYE7	350 aa		32.14	■■■□□ 2.74
COCH-208	ENST00000555117	ARHGEF10	O15013	1369 aa		32.14	■■■□□ 2.74
COCH-208	ENST00000555117	SLIT2	O94813	1529 aa		32.13	■■■□□ 2.73
COCH-208	ENST00000555117	HAP1	P54257	671 aa	Predicted RBP	32.13	■■■□□ 2.73
COCH-208	ENST00000555117	LMOD2	Q6P5Q4	547 aa		32.13	■■■□□ 2.73
COCH-208	ENST00000555117	ALS2	Q96Q42	1657 aa		32.11	■■■□□ 2.73
COCH-208	ENST00000555117	PLEKHG5	O94827	1062 aa		32.11	■■■□□ 2.73
COCH-208	ENST00000555117	CABLES1	Q8TDN4	633 aa		32.11	■■■□□ 2.73
COCH-208	ENST00000555117	PLCH1	Q4KWH8	1693 aa		32.1	■■■□□ 2.73
COCH-208	ENST00000555117	GPRASP1	Q5JY77	1395 aa		32.08	■■■□□ 2.73
COCH-208	ENST00000555117	ATP7B	P35670	1465 aa		32.08	■■■□□ 2.73
COCH-208	ENST00000555117	NWD2	Q9ULI1	1742 aa		32.07	■■■□□ 2.72
COCH-208	ENST00000555117	UNC5CL	Q8IV45	518 aa		32.06	■■■□□ 2.72
COCH-208	ENST00000555117	GJD4	Q96KN9	370 aa	Predicted RBP	32.06	■■■□□ 2.72
COCH-208	ENST00000555117	GLI3	P10071	1580 aa		32.04	■■■□□ 2.72
COCH-208	ENST00000555117	NBPF1	Q3BBV0	1214 aa		32.04	■■■□□ 2.72
COCH-208	ENST00000555117	ATAD2	Q6PL18	1390 aa		32.04	■■■□□ 2.72
COCH-208	ENST00000555117	TOPAZ1	Q8N9V7	1692 aa		32.03	■■■□□ 2.72
COCH-208	ENST00000555117	NGDN	Q8NEJ9	315 aa	Known RBP	32.03	■■■□□ 2.72
COCH-208	ENST00000555117	NUDT16	Q96DE0	195 aa	Known RBP	32.01	■■■□□ 2.71
COCH-208	ENST00000555117	RALGAPB	Q86X10	1494 aa		32.01	■■■□□ 2.71
COCH-208	ENST00000555117	CRYBG1	Q9Y4K1	1723 aa		32	■■■□□ 2.71
COCH-208	ENST00000555117	CDK19	Q9BWU1	502 aa		31.99	■■■□□ 2.71
COCH-208	ENST00000555117	L3MBTL2	Q969R5	705 aa		31.96	■■■□□ 2.71
COCH-208	ENST00000555117	QRICH2	Q9H0J4	1663 aa		31.95	■■■□□ 2.71
COCH-208	ENST00000555117	PAK3	O75914	559 aa	Predicted RBP	31.95	■■■□□ 2.71
COCH-208	ENST00000555117	SIN3A	Q96ST3	1273 aa		31.95	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms