RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 NEUROD2Q15784 382 aa19.57■□□□□ 0.72
XRCC3-211ENST00000555055 SBNO2Q9Y2G9 1366 aa19.57■□□□□ 0.72
XRCC3-211ENST00000555055 DMRT2Q9Y5R5 561 aa19.56■□□□□ 0.72
XRCC3-211ENST00000555055 PDE3BQ13370 1112 aa19.56■□□□□ 0.72
XRCC3-211ENST00000555055 POGKQ9P215 609 aa19.55■□□□□ 0.72
XRCC3-211ENST00000555055 TULP4Q9NRJ4 1543 aa19.55■□□□□ 0.72
XRCC3-211ENST00000555055 EVC2Q86UK5 1308 aa19.55■□□□□ 0.72
XRCC3-211ENST00000555055 C20orf194Q5TEA3 1177 aa19.55■□□□□ 0.72
XRCC3-211ENST00000555055 RRP7AQ9Y3A4 280 aaKnown RBP19.55■□□□□ 0.72
XRCC3-211ENST00000555055 TMEM131LA2VDJ0 1609 aa19.55■□□□□ 0.72
XRCC3-211ENST00000555055 ZC3H13Q5T200 1668 aaKnown RBP19.54■□□□□ 0.72
XRCC3-211ENST00000555055 ZMYM4Q5VZL5 1548 aa19.54■□□□□ 0.72
XRCC3-211ENST00000555055 SLC24A1O60721 1099 aa19.53■□□□□ 0.72
XRCC3-211ENST00000555055 WAPLQ7Z5K2 1190 aa19.53■□□□□ 0.72
XRCC3-211ENST00000555055 ARHGEF28Q8N1W1 1705 aaKnown RBP19.53■□□□□ 0.72
XRCC3-211ENST00000555055 NPC1L1Q9UHC9 1359 aa19.53■□□□□ 0.72
XRCC3-211ENST00000555055 CLTCQ00610 1675 aaKnown RBP19.53■□□□□ 0.72
XRCC3-211ENST00000555055 SKAP1Q86WV1 359 aa19.52■□□□□ 0.72
XRCC3-211ENST00000555055 MTHFSP49914 203 aa19.51■□□□□ 0.71
XRCC3-211ENST00000555055 DUSP27Q5VZP5 1158 aa19.51■□□□□ 0.71
XRCC3-211ENST00000555055 GGNBP2Q9H3C7 697 aa19.51■□□□□ 0.71
XRCC3-211ENST00000555055 GOLGA2Q08379 1002 aa19.49■□□□□ 0.71
XRCC3-211ENST00000555055 CRBNQ96SW2 442 aa19.48■□□□□ 0.71
XRCC3-211ENST00000555055 FBLN1P23142 703 aa19.48■□□□□ 0.71
XRCC3-211ENST00000555055 ESF1Q9H501 851 aaKnown RBP19.48■□□□□ 0.71
XRCC3-211ENST00000555055 CGNL1Q0VF96 1302 aa19.48■□□□□ 0.71
XRCC3-211ENST00000555055 ZNF521Q96K83 1311 aa19.48■□□□□ 0.71
XRCC3-211ENST00000555055 YTHDC2Q9H6S0 1430 aaKnown RBP19.48■□□□□ 0.71
XRCC3-211ENST00000555055 A0A1W2PP64 1363 aa19.47■□□□□ 0.71
XRCC3-211ENST00000555055 KIF13AQ9H1H9 1805 aa19.46■□□□□ 0.71
XRCC3-211ENST00000555055 IPO9Q96P70 1041 aaKnown RBP19.45■□□□□ 0.7
XRCC3-211ENST00000555055 PTPRMP28827 1452 aa19.45■□□□□ 0.7
XRCC3-211ENST00000555055 ANP32AP39687 249 aaKnown RBP19.45■□□□□ 0.7
XRCC3-211ENST00000555055 CDK19Q9BWU1 502 aa19.44■□□□□ 0.7
XRCC3-211ENST00000555055 CABP1Q9NZU7 370 aa19.44■□□□□ 0.7
XRCC3-211ENST00000555055 ANKRD36BQ8N2N9 1353 aa19.44■□□□□ 0.7
XRCC3-211ENST00000555055 CEBPAP49715 358 aaPredicted RBP19.43■□□□□ 0.7
XRCC3-211ENST00000555055 SLFN5Q08AF3 891 aa19.43■□□□□ 0.7
XRCC3-211ENST00000555055 ALKQ9UM73 1620 aa19.43■□□□□ 0.7
XRCC3-211ENST00000555055 A2ML1A8K2U0 1454 aa19.43■□□□□ 0.7
XRCC3-211ENST00000555055 ZFYVE9O95405 1425 aa19.43■□□□□ 0.7
XRCC3-211ENST00000555055 INSRP06213 1382 aa19.43■□□□□ 0.7
XRCC3-211ENST00000555055 NCKAP5LQ9HCH0 1330 aa19.43■□□□□ 0.7
XRCC3-211ENST00000555055 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.42■□□□□ 0.7
XRCC3-211ENST00000555055 ZMYM3Q14202 1370 aa19.42■□□□□ 0.7
XRCC3-211ENST00000555055 BCAR3O75815 825 aa19.41■□□□□ 0.7
XRCC3-211ENST00000555055 TXNDC2Q86VQ3 553 aa19.41■□□□□ 0.7
XRCC3-211ENST00000555055 RIMS2Q9UQ26 1411 aa19.41■□□□□ 0.7
XRCC3-211ENST00000555055 POLR3AO14802 1390 aaPredicted RBP19.4■□□□□ 0.7
XRCC3-211ENST00000555055 PAK3O75914 559 aaPredicted RBP19.4■□□□□ 0.7
XRCC3-211ENST00000555055 U2AF1L5P0DN76 240 aaPredicted RBP19.39■□□□□ 0.7
XRCC3-211ENST00000555055 U2AF1Q01081 240 aaKnown RBP eCLIP19.39■□□□□ 0.7
XRCC3-211ENST00000555055 TCP11L2Q8N4U5 519 aa19.39■□□□□ 0.69
XRCC3-211ENST00000555055 U2SURPO15042 1029 aaKnown RBP19.38■□□□□ 0.69
XRCC3-211ENST00000555055 FYB1O15117 783 aa19.38■□□□□ 0.69
XRCC3-211ENST00000555055 WWC1Q8IX03 1113 aa19.38■□□□□ 0.69
XRCC3-211ENST00000555055 AGLP35573 1532 aa19.38■□□□□ 0.69
XRCC3-211ENST00000555055 METP08581 1390 aa19.38■□□□□ 0.69
XRCC3-211ENST00000555055 PPM1GO15355 546 aaPredicted RBP19.38■□□□□ 0.69
XRCC3-211ENST00000555055 NUTM2FA1L443 756 aa19.37■□□□□ 0.69
XRCC3-211ENST00000555055 SHPRHQ149N8 1683 aa19.36■□□□□ 0.69
XRCC3-211ENST00000555055 ARHGEF40Q8TER5 1519 aa19.35■□□□□ 0.69
XRCC3-211ENST00000555055 CD163L1Q9NR16 1453 aa19.34■□□□□ 0.69
XRCC3-211ENST00000555055 ZBTB47Q9UFB7 747 aaPredicted RBP19.34■□□□□ 0.69
XRCC3-211ENST00000555055 SPATA31D1Q6ZQQ2 1576 aa19.34■□□□□ 0.69
XRCC3-211ENST00000555055 CFAP53Q96M91 514 aa19.34■□□□□ 0.69
XRCC3-211ENST00000555055 BCL2L13Q9BXK5 485 aa19.34■□□□□ 0.69
XRCC3-211ENST00000555055 RTL5Q5HYW3 569 aaPredicted RBP19.33■□□□□ 0.69
XRCC3-211ENST00000555055 RUNDC1Q96C34 613 aa19.33■□□□□ 0.69
XRCC3-211ENST00000555055 TERF2IPQ9NYB0 399 aa19.33■□□□□ 0.69
XRCC3-211ENST00000555055 ZRANB1Q9UGI0 708 aa19.33■□□□□ 0.69
XRCC3-211ENST00000555055 TRMT2AQ8IZ69 625 aaKnown RBP19.33■□□□□ 0.68
XRCC3-211ENST00000555055 PPP6R1Q9UPN7 881 aa19.33■□□□□ 0.68
XRCC3-211ENST00000555055 ABCC11Q96J66 1382 aa19.33■□□□□ 0.68
XRCC3-211ENST00000555055 REREQ9P2R6 1566 aa19.32■□□□□ 0.68
XRCC3-211ENST00000555055 ATAD2Q6PL18 1390 aa19.31■□□□□ 0.68
XRCC3-211ENST00000555055 E9PSI1 815 aa19.31■□□□□ 0.68
XRCC3-211ENST00000555055 NBR1Q14596 966 aa19.3■□□□□ 0.68
XRCC3-211ENST00000555055 HDGFL2Q7Z4V5 671 aaPredicted RBP19.3■□□□□ 0.68
XRCC3-211ENST00000555055 PUS7Q96PZ0 661 aaKnown RBP19.3■□□□□ 0.68
XRCC3-211ENST00000555055 NKTRP30414 1462 aaKnown RBP19.29■□□□□ 0.68
XRCC3-211ENST00000555055 FRAT1Q92837 279 aaPredicted RBP19.29■□□□□ 0.68
XRCC3-211ENST00000555055 SLC26A8Q96RN1 970 aa19.29■□□□□ 0.68
XRCC3-211ENST00000555055 USP35Q9P2H5 1018 aa19.29■□□□□ 0.68
XRCC3-211ENST00000555055 TNRQ92752 1358 aa19.28■□□□□ 0.68
XRCC3-211ENST00000555055 TCERG1O14776 1098 aaKnown RBP19.28■□□□□ 0.68
XRCC3-211ENST00000555055 TNNQ9UQP3 1299 aa19.28■□□□□ 0.68
XRCC3-211ENST00000555055 TRHP20396 242 aaPredicted RBP19.27■□□□□ 0.68
XRCC3-211ENST00000555055 LTKP29376 864 aa19.27■□□□□ 0.68
XRCC3-211ENST00000555055 NME9Q86XW9 330 aa19.26■□□□□ 0.67
XRCC3-211ENST00000555055 TSR2Q969E8 191 aaKnown RBP19.26■□□□□ 0.67
XRCC3-211ENST00000555055 USP32Q8NFA0 1604 aa19.26■□□□□ 0.67
XRCC3-211ENST00000555055 PANK1Q8TE04 598 aa19.26■□□□□ 0.67
XRCC3-211ENST00000555055 MS4A1P11836 297 aa19.25■□□□□ 0.67
XRCC3-211ENST00000555055 NRXN3Q9Y4C0 1643 aa19.25■□□□□ 0.67
XRCC3-211ENST00000555055 NPM2Q86SE8 214 aaKnown RBP19.25■□□□□ 0.67
XRCC3-211ENST00000555055 NLRP1Q9C000 1473 aa19.24■□□□□ 0.67
XRCC3-211ENST00000555055 WASLO00401 505 aaPredicted RBP19.24■□□□□ 0.67
XRCC3-211ENST00000555055 NSD2O96028 1365 aa19.24■□□□□ 0.67
XRCC3-211ENST00000555055 CANXP27824 592 aaKnown RBP19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms