RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 RXRBP28702 533 aa23.41■■□□□ 1.34
ARHGEF40-205ENST00000555052 LRPPRCP42704 1394 aaKnown RBP23.4■■□□□ 1.34
ARHGEF40-205ENST00000555052 KNDC1Q76NI1 1749 aa23.4■■□□□ 1.34
ARHGEF40-205ENST00000555052 ABCC11Q96J66 1382 aa23.39■■□□□ 1.33
ARHGEF40-205ENST00000555052 C8orf37Q96NL8 207 aa23.38■■□□□ 1.33
ARHGEF40-205ENST00000555052 COL22A1Q8NFW1 1626 aaPredicted RBP23.37■■□□□ 1.33
ARHGEF40-205ENST00000555052 ACIN1Q9UKV3 1341 aaKnown RBP23.36■■□□□ 1.33
ARHGEF40-205ENST00000555052 UPF1Q92900 1129 aaKnown RBP eCLIP23.35■■□□□ 1.33
ARHGEF40-205ENST00000555052 STK26Q9P289 416 aa23.35■■□□□ 1.33
ARHGEF40-205ENST00000555052 PXDNQ92626 1479 aa23.35■■□□□ 1.33
ARHGEF40-205ENST00000555052 NRXN1Q9ULB1 1477 aa23.35■■□□□ 1.33
ARHGEF40-205ENST00000555052 WAPLQ7Z5K2 1190 aa23.34■■□□□ 1.33
ARHGEF40-205ENST00000555052 PLEKHH1Q9ULM0 1364 aa23.34■■□□□ 1.33
ARHGEF40-205ENST00000555052 NPHP3Q7Z494 1330 aa23.33■■□□□ 1.33
ARHGEF40-205ENST00000555052 YTHDC2Q9H6S0 1430 aaKnown RBP23.33■■□□□ 1.33
ARHGEF40-205ENST00000555052 EP400Q96L91 3159 aa23.33■■□□□ 1.33
ARHGEF40-205ENST00000555052 TMEM132EQ6IEE7 984 aa23.33■■□□□ 1.33
ARHGEF40-205ENST00000555052 MYOM2P54296 1465 aa23.32■■□□□ 1.32
ARHGEF40-205ENST00000555052 SRCAPQ6ZRS2 3230 aa23.32■■□□□ 1.32
ARHGEF40-205ENST00000555052 ADAMTS2O95450 1211 aa23.32■■□□□ 1.32
ARHGEF40-205ENST00000555052 ESCO1Q5FWF5 840 aa23.32■■□□□ 1.32
ARHGEF40-205ENST00000555052 RGS12O14924 1447 aa23.32■■□□□ 1.32
ARHGEF40-205ENST00000555052 QTRT2Q9H974 415 aaKnown RBP23.31■■□□□ 1.32
ARHGEF40-205ENST00000555052 RBM6P78332 1123 aaKnown RBP23.3■■□□□ 1.32
ARHGEF40-205ENST00000555052 NGLY1Q96IV0 654 aa23.3■■□□□ 1.32
ARHGEF40-205ENST00000555052 FMN2Q9NZ56 1722 aa23.3■■□□□ 1.32
ARHGEF40-205ENST00000555052 RAB3GAP2Q9H2M9 1393 aa23.28■■□□□ 1.32
ARHGEF40-205ENST00000555052 C14orf93Q9H972 538 aaKnown RBP23.28■■□□□ 1.32
ARHGEF40-205ENST00000555052 FOXO3O43524 673 aa23.27■■□□□ 1.32
ARHGEF40-205ENST00000555052 SIRT1Q96EB6 747 aa23.27■■□□□ 1.32
ARHGEF40-205ENST00000555052 FNBP4Q8N3X1 1017 aaPredicted RBP23.26■■□□□ 1.31
ARHGEF40-205ENST00000555052 NUTM2FA1L443 756 aa23.25■■□□□ 1.31
ARHGEF40-205ENST00000555052 XPCQ01831 940 aaPredicted RBP23.24■■□□□ 1.31
ARHGEF40-205ENST00000555052 KIF1AQ12756 1690 aa23.24■■□□□ 1.31
ARHGEF40-205ENST00000555052 CFAP70Q5T0N1 1121 aa23.23■■□□□ 1.31
ARHGEF40-205ENST00000555052 USP21Q9UK80 565 aa23.23■■□□□ 1.31
ARHGEF40-205ENST00000555052 ATRNO75882 1429 aa23.23■■□□□ 1.31
ARHGEF40-205ENST00000555052 MARF1Q9Y4F3 1742 aaKnown RBP23.22■■□□□ 1.31
ARHGEF40-205ENST00000555052 DHX57Q6P158 1386 aaKnown RBP23.21■■□□□ 1.31
ARHGEF40-205ENST00000555052 TRPC5Q9UL62 973 aaPredicted RBP23.2■■□□□ 1.3
ARHGEF40-205ENST00000555052 DLC1Q96QB1 1528 aa23.19■■□□□ 1.3
ARHGEF40-205ENST00000555052 BCL9LQ86UU0 1499 aa23.19■■□□□ 1.3
ARHGEF40-205ENST00000555052 ADGRB1O14514 1584 aa23.18■■□□□ 1.3
ARHGEF40-205ENST00000555052 SPATA31A3Q5VYP0 1347 aa23.18■■□□□ 1.3
ARHGEF40-205ENST00000555052 RGPD8O14715 1765 aaPredicted RBP23.17■■□□□ 1.3
ARHGEF40-205ENST00000555052 PRAM1Q96QH2 718 aa23.15■■□□□ 1.3
ARHGEF40-205ENST00000555052 ADGRB2O60241 1585 aa23.14■■□□□ 1.29
ARHGEF40-205ENST00000555052 KRT28Q7Z3Y7 464 aa23.13■■□□□ 1.29
ARHGEF40-205ENST00000555052 PHF8Q9UPP1 1060 aa23.13■■□□□ 1.29
ARHGEF40-205ENST00000555052 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.13■■□□□ 1.29
ARHGEF40-205ENST00000555052 TNS3Q68CZ2 1445 aa23.12■■□□□ 1.29
ARHGEF40-205ENST00000555052 SLIT2O94813 1529 aa23.12■■□□□ 1.29
ARHGEF40-205ENST00000555052 ATAD2Q6PL18 1390 aa23.12■■□□□ 1.29
ARHGEF40-205ENST00000555052 USP32Q8NFA0 1604 aa23.11■■□□□ 1.29
ARHGEF40-205ENST00000555052 SAFB2Q14151 953 aaKnown RBP eCLIP23.11■■□□□ 1.29
ARHGEF40-205ENST00000555052 ANKARQ7Z5J8 1434 aa23.1■■□□□ 1.29
ARHGEF40-205ENST00000555052 HRCP23327 699 aa23.09■■□□□ 1.29
ARHGEF40-205ENST00000555052 SBNO1A3KN83 1393 aa23.09■■□□□ 1.29
ARHGEF40-205ENST00000555052 POGKQ9P215 609 aa23.07■■□□□ 1.28
ARHGEF40-205ENST00000555052 PSME1Q06323 249 aa23.06■■□□□ 1.28
ARHGEF40-205ENST00000555052 GJD4Q96KN9 370 aaPredicted RBP23.06■■□□□ 1.28
ARHGEF40-205ENST00000555052 ABCA3Q99758 1704 aa23.05■■□□□ 1.28
ARHGEF40-205ENST00000555052 UNC5CLQ8IV45 518 aa23.05■■□□□ 1.28
ARHGEF40-205ENST00000555052 DCAF11Q8TEB1 546 aa23.05■■□□□ 1.28
ARHGEF40-205ENST00000555052 GLI3P10071 1580 aa23.05■■□□□ 1.28
ARHGEF40-205ENST00000555052 STAC3Q96MF2 364 aa23.04■■□□□ 1.28
ARHGEF40-205ENST00000555052 TRAK1Q9UPV9 953 aa23.04■■□□□ 1.28
ARHGEF40-205ENST00000555052 RALGAPBQ86X10 1494 aa23.04■■□□□ 1.28
ARHGEF40-205ENST00000555052 ARHGEF10O15013 1369 aa23.03■■□□□ 1.28
ARHGEF40-205ENST00000555052 KDM2AQ9Y2K7 1162 aa23.02■■□□□ 1.28
ARHGEF40-205ENST00000555052 TULP4Q9NRJ4 1543 aa23.02■■□□□ 1.28
ARHGEF40-205ENST00000555052 TRPM3Q9HCF6 1732 aaPredicted RBP23.02■■□□□ 1.28
ARHGEF40-205ENST00000555052 PMFBP1Q8TBY8 1022 aa23.01■■□□□ 1.27
ARHGEF40-205ENST00000555052 CABLES1Q8TDN4 633 aa23.01■■□□□ 1.27
ARHGEF40-205ENST00000555052 HIRIP3Q9BW71 556 aaPredicted RBP23.01■■□□□ 1.27
ARHGEF40-205ENST00000555052 PRR36Q9H6K5 1346 aa23.01■■□□□ 1.27
ARHGEF40-205ENST00000555052 EIF3AQ14152 1382 aaKnown RBP23■■□□□ 1.27
ARHGEF40-205ENST00000555052 PLCH1Q4KWH8 1693 aa23■■□□□ 1.27
ARHGEF40-205ENST00000555052 NWD2Q9ULI1 1742 aa22.99■■□□□ 1.27
ARHGEF40-205ENST00000555052 MINK1Q8N4C8 1332 aaPredicted RBP22.99■■□□□ 1.27
ARHGEF40-205ENST00000555052 ALS2Q96Q42 1657 aa22.98■■□□□ 1.27
ARHGEF40-205ENST00000555052 ARHGEF28Q8N1W1 1705 aaKnown RBP22.98■■□□□ 1.27
ARHGEF40-205ENST00000555052 WASLO00401 505 aaPredicted RBP22.97■■□□□ 1.27
ARHGEF40-205ENST00000555052 HAP1P54257 671 aaPredicted RBP22.96■■□□□ 1.27
ARHGEF40-205ENST00000555052 VPS72Q15906 364 aa22.95■■□□□ 1.26
ARHGEF40-205ENST00000555052 LMOD2Q6P5Q4 547 aa22.95■■□□□ 1.26
ARHGEF40-205ENST00000555052 BRWD3Q6RI45 1802 aa22.94■■□□□ 1.26
ARHGEF40-205ENST00000555052 GPRASP1Q5JY77 1395 aa22.93■■□□□ 1.26
ARHGEF40-205ENST00000555052 CCDC125Q86Z20 511 aa22.93■■□□□ 1.26
ARHGEF40-205ENST00000555052 ATP7BP35670 1465 aa22.92■■□□□ 1.26
ARHGEF40-205ENST00000555052 PLEKHG5O94827 1062 aa22.92■■□□□ 1.26
ARHGEF40-205ENST00000555052 NRAPQ86VF7 1730 aa22.91■■□□□ 1.26
ARHGEF40-205ENST00000555052 FAM83GA6ND36 823 aa22.91■■□□□ 1.26
ARHGEF40-205ENST00000555052 CRYBG1Q9Y4K1 1723 aa22.91■■□□□ 1.26
ARHGEF40-205ENST00000555052 ONECUT3O60422 494 aaPredicted RBP22.9■■□□□ 1.26
ARHGEF40-205ENST00000555052 ITSN1Q15811 1721 aa22.9■■□□□ 1.26
ARHGEF40-205ENST00000555052 KIAA1210Q9ULL0 1709 aa22.9■■□□□ 1.26
ARHGEF40-205ENST00000555052 SEPT12Q8IYM1 358 aa22.88■■□□□ 1.25
ARHGEF40-205ENST00000555052 COL14A1Q05707 1796 aaKnown RBP22.87■■□□□ 1.25
ARHGEF40-205ENST00000555052 BLMP54132 1417 aaPredicted RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms