RNA–Protein interactions for RNA: ENST00000554927.1

TUBB3-207, Transcript of tubulin beta 3 class III, humanhuman

TSL 2

Gene TUBB3, Length 561 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-207ENST00000554927 CLTCL1P53675 1640 aa20.13■□□□□ 0.81
TUBB3-207ENST00000554927 MYOM2P54296 1465 aa20.11■□□□□ 0.81
TUBB3-207ENST00000554927 BCL9LQ86UU0 1499 aa20.11■□□□□ 0.81
TUBB3-207ENST00000554927 COL22A1Q8NFW1 1626 aaPredicted RBP20.11■□□□□ 0.81
TUBB3-207ENST00000554927 FOXO3O43524 673 aa20.09■□□□□ 0.81
TUBB3-207ENST00000554927 HFM1A2PYH4 1435 aa20.09■□□□□ 0.81
TUBB3-207ENST00000554927 SF3B2Q13435 895 aaKnown RBP20.08■□□□□ 0.81
TUBB3-207ENST00000554927 EP400Q96L91 3159 aa20.07■□□□□ 0.8
TUBB3-207ENST00000554927 BLMP54132 1417 aaPredicted RBP20.07■□□□□ 0.8
TUBB3-207ENST00000554927 NUTM2FA1L443 756 aa20.06■□□□□ 0.8
TUBB3-207ENST00000554927 LRPPRCP42704 1394 aaKnown RBP20.06■□□□□ 0.8
TUBB3-207ENST00000554927 KIF1BO60333 1816 aa20.05■□□□□ 0.8
TUBB3-207ENST00000554927 DEFB132Q7Z7B7 95 aa20.05■□□□□ 0.8
TUBB3-207ENST00000554927 UNC5CLQ8IV45 518 aa20.05■□□□□ 0.8
TUBB3-207ENST00000554927 PXDNQ92626 1479 aa20.05■□□□□ 0.8
TUBB3-207ENST00000554927 RALGAPBQ86X10 1494 aa20.03■□□□□ 0.8
TUBB3-207ENST00000554927 RPGRIP1LQ68CZ1 1315 aa20.02■□□□□ 0.8
TUBB3-207ENST00000554927 PRAG1Q86YV5 1406 aa20.02■□□□□ 0.8
TUBB3-207ENST00000554927 HAP1P54257 671 aaPredicted RBP20.02■□□□□ 0.8
TUBB3-207ENST00000554927 CDC42BPGQ6DT37 1551 aa20.01■□□□□ 0.79
TUBB3-207ENST00000554927 MARF1Q9Y4F3 1742 aaKnown RBP20.01■□□□□ 0.79
TUBB3-207ENST00000554927 PPARGC1BQ86YN6 1023 aaKnown RBP20■□□□□ 0.79
TUBB3-207ENST00000554927 STK26Q9P289 416 aa20■□□□□ 0.79
TUBB3-207ENST00000554927 CCDC9Q9Y3X0 531 aaKnown RBP20■□□□□ 0.79
TUBB3-207ENST00000554927 PLEKHG5O94827 1062 aa19.99■□□□□ 0.79
TUBB3-207ENST00000554927 SEPT12Q8IYM1 358 aa19.99■□□□□ 0.79
TUBB3-207ENST00000554927 NAIPQ13075 1403 aa19.99■□□□□ 0.79
TUBB3-207ENST00000554927 GLI3P10071 1580 aa19.99■□□□□ 0.79
TUBB3-207ENST00000554927 SLIT2O94813 1529 aa19.97■□□□□ 0.79
TUBB3-207ENST00000554927 WAPLQ7Z5K2 1190 aa19.97■□□□□ 0.79
TUBB3-207ENST00000554927 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.96■□□□□ 0.79
TUBB3-207ENST00000554927 SPATA31A3Q5VYP0 1347 aa19.96■□□□□ 0.79
TUBB3-207ENST00000554927 A0A0G2JS52 829 aa19.95■□□□□ 0.78
TUBB3-207ENST00000554927 MYT1Q01538 1121 aa19.95■□□□□ 0.78
TUBB3-207ENST00000554927 PSDA5PKW4 1024 aaPredicted RBP19.94■□□□□ 0.78
TUBB3-207ENST00000554927 KRT28Q7Z3Y7 464 aa19.94■□□□□ 0.78
TUBB3-207ENST00000554927 VPS72Q15906 364 aa19.93■□□□□ 0.78
TUBB3-207ENST00000554927 KRT27Q7Z3Y8 459 aa19.93■□□□□ 0.78
TUBB3-207ENST00000554927 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
TUBB3-207ENST00000554927 LMOD2Q6P5Q4 547 aa19.92■□□□□ 0.78
TUBB3-207ENST00000554927 SLC4A1APQ9BWU0 796 aaKnown RBP19.92■□□□□ 0.78
TUBB3-207ENST00000554927 CABLES1Q8TDN4 633 aa19.91■□□□□ 0.78
TUBB3-207ENST00000554927 USP32Q8NFA0 1604 aa19.91■□□□□ 0.78
TUBB3-207ENST00000554927 PPLO60437 1756 aa19.9■□□□□ 0.78
TUBB3-207ENST00000554927 BRWD3Q6RI45 1802 aa19.9■□□□□ 0.78
TUBB3-207ENST00000554927 BAG6P46379 1132 aa19.9■□□□□ 0.78
TUBB3-207ENST00000554927 ADGRF5Q8IZF2 1346 aa19.9■□□□□ 0.78
TUBB3-207ENST00000554927 LRP5O75197 1615 aa19.9■□□□□ 0.78
TUBB3-207ENST00000554927 PSME1Q06323 249 aa19.89■□□□□ 0.77
TUBB3-207ENST00000554927 TMEM132EQ6IEE7 984 aa19.89■□□□□ 0.77
TUBB3-207ENST00000554927 PLEKHH1Q9ULM0 1364 aa19.89■□□□□ 0.77
TUBB3-207ENST00000554927 RGL3Q3MIN7 710 aa19.88■□□□□ 0.77
TUBB3-207ENST00000554927 RRBP1Q9P2E9 1410 aaKnown RBP19.87■□□□□ 0.77
TUBB3-207ENST00000554927 HRCP23327 699 aa19.87■□□□□ 0.77
TUBB3-207ENST00000554927 KIF1AQ12756 1690 aa19.87■□□□□ 0.77
TUBB3-207ENST00000554927 TECPR2O15040 1411 aa19.86■□□□□ 0.77
TUBB3-207ENST00000554927 TNS3Q68CZ2 1445 aa19.86■□□□□ 0.77
TUBB3-207ENST00000554927 ONECUT3O60422 494 aaPredicted RBP19.86■□□□□ 0.77
TUBB3-207ENST00000554927 PHF8Q9UPP1 1060 aa19.86■□□□□ 0.77
TUBB3-207ENST00000554927 ABCC11Q96J66 1382 aa19.85■□□□□ 0.77
TUBB3-207ENST00000554927 FMN2Q9NZ56 1722 aa19.83■□□□□ 0.77
TUBB3-207ENST00000554927 FAM98CQ17RN3 349 aaKnown RBP19.83■□□□□ 0.77
TUBB3-207ENST00000554927 PLCH1Q4KWH8 1693 aa19.82■□□□□ 0.76
TUBB3-207ENST00000554927 ARHGEF10O15013 1369 aa19.82■□□□□ 0.76
TUBB3-207ENST00000554927 FAM83GA6ND36 823 aa19.81■□□□□ 0.76
TUBB3-207ENST00000554927 EN1Q05925 392 aaPredicted RBP19.81■□□□□ 0.76
TUBB3-207ENST00000554927 ANKRD30BQ9BXX2 1392 aa19.81■□□□□ 0.76
TUBB3-207ENST00000554927 YTHDC2Q9H6S0 1430 aaKnown RBP19.8■□□□□ 0.76
TUBB3-207ENST00000554927 SBNO1A3KN83 1393 aa19.8■□□□□ 0.76
TUBB3-207ENST00000554927 NWD2Q9ULI1 1742 aa19.79■□□□□ 0.76
TUBB3-207ENST00000554927 R3HDM1Q15032 1099 aaKnown RBP19.79■□□□□ 0.76
TUBB3-207ENST00000554927 SAFB2Q14151 953 aaKnown RBP eCLIP19.78■□□□□ 0.76
TUBB3-207ENST00000554927 FAM182BQ5T319 152 aa19.78■□□□□ 0.76
TUBB3-207ENST00000554927 BTG4Q9NY30 223 aa19.78■□□□□ 0.76
TUBB3-207ENST00000554927 KNDC1Q76NI1 1749 aa19.77■□□□□ 0.76
TUBB3-207ENST00000554927 PMFBP1Q8TBY8 1022 aa19.76■□□□□ 0.75
TUBB3-207ENST00000554927 NRXN1Q9ULB1 1477 aa19.75■□□□□ 0.75
TUBB3-207ENST00000554927 PIK3C2GO75747 1445 aa19.75■□□□□ 0.75
TUBB3-207ENST00000554927 SIRT1Q96EB6 747 aa19.74■□□□□ 0.75
TUBB3-207ENST00000554927 SPATA31E1Q6ZUB1 1445 aa19.74■□□□□ 0.75
TUBB3-207ENST00000554927 IFT172Q9UG01 1749 aa19.73■□□□□ 0.75
TUBB3-207ENST00000554927 PRAM1Q96QH2 718 aa19.73■□□□□ 0.75
TUBB3-207ENST00000554927 ABCA3Q99758 1704 aa19.73■□□□□ 0.75
TUBB3-207ENST00000554927 DHX57Q6P158 1386 aaKnown RBP19.72■□□□□ 0.75
TUBB3-207ENST00000554927 POGKQ9P215 609 aa19.72■□□□□ 0.75
TUBB3-207ENST00000554927 RGPD8O14715 1765 aaPredicted RBP19.72■□□□□ 0.75
TUBB3-207ENST00000554927 EZH2Q15910 746 aaKnown RBP19.71■□□□□ 0.75
TUBB3-207ENST00000554927 RGPD1P0DJD0 1748 aa19.71■□□□□ 0.75
TUBB3-207ENST00000554927 GPRASP1Q5JY77 1395 aa19.7■□□□□ 0.74
TUBB3-207ENST00000554927 CFAP70Q5T0N1 1121 aa19.69■□□□□ 0.74
TUBB3-207ENST00000554927 C14orf93Q9H972 538 aaKnown RBP19.69■□□□□ 0.74
TUBB3-207ENST00000554927 SPATA31A5Q5VU36 1347 aa19.69■□□□□ 0.74
TUBB3-207ENST00000554927 SPATA31A7Q8IWB4 1347 aa19.69■□□□□ 0.74
TUBB3-207ENST00000554927 NRAPQ86VF7 1730 aa19.68■□□□□ 0.74
TUBB3-207ENST00000554927 ANKARQ7Z5J8 1434 aa19.67■□□□□ 0.74
TUBB3-207ENST00000554927 COL14A1Q05707 1796 aaKnown RBP19.66■□□□□ 0.74
TUBB3-207ENST00000554927 PAK3O75914 559 aaPredicted RBP19.66■□□□□ 0.74
TUBB3-207ENST00000554927 TRIM37O94972 964 aa19.66■□□□□ 0.74
TUBB3-207ENST00000554927 YY1P25490 414 aa19.66■□□□□ 0.74
TUBB3-207ENST00000554927 MPHOSPH9Q99550 1183 aa19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms