RNA–Protein interactions for RNA: ENST00000554844.1

TMEM253-204, Transcript of transmembrane protein 253, humanhuman

TSL 4

Gene TMEM253, Length 591 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM253-204ENST00000554844 TRPC5Q9UL62 973 aaPredicted RBP14.53□□□□□ -0.08
TMEM253-204ENST00000554844 NAIPQ13075 1403 aa14.52□□□□□ -0.08
TMEM253-204ENST00000554844 ROBO2Q9HCK4 1378 aa14.52□□□□□ -0.08
TMEM253-204ENST00000554844 SOS2Q07890 1332 aaPredicted RBP14.52□□□□□ -0.08
TMEM253-204ENST00000554844 ORAI2Q96SN7 254 aa14.52□□□□□ -0.09
TMEM253-204ENST00000554844 LAMC1P11047 1609 aa14.52□□□□□ -0.09
TMEM253-204ENST00000554844 NPHP3Q7Z494 1330 aa14.51□□□□□ -0.09
TMEM253-204ENST00000554844 RRBP1Q9P2E9 1410 aaKnown RBP14.5□□□□□ -0.09
TMEM253-204ENST00000554844 ESCO1Q5FWF5 840 aa14.5□□□□□ -0.09
TMEM253-204ENST00000554844 PRAG1Q86YV5 1406 aa14.49□□□□□ -0.09
TMEM253-204ENST00000554844 LRPPRCP42704 1394 aaKnown RBP14.49□□□□□ -0.09
TMEM253-204ENST00000554844 PPLO60437 1756 aa14.48□□□□□ -0.09
TMEM253-204ENST00000554844 CDC42BPGQ6DT37 1551 aa14.47□□□□□ -0.09
TMEM253-204ENST00000554844 MAPK8IP2Q13387 824 aaPredicted RBP14.47□□□□□ -0.09
TMEM253-204ENST00000554844 COL22A1Q8NFW1 1626 aaPredicted RBP14.47□□□□□ -0.09
TMEM253-204ENST00000554844 FNBP4Q8N3X1 1017 aaPredicted RBP14.46□□□□□ -0.09
TMEM253-204ENST00000554844 CCDC144AA2RUR9 1427 aa14.45□□□□□ -0.1
TMEM253-204ENST00000554844 ATRNO75882 1429 aa14.45□□□□□ -0.1
TMEM253-204ENST00000554844 STK26Q9P289 416 aa14.44□□□□□ -0.1
TMEM253-204ENST00000554844 ZRANB1Q9UGI0 708 aa14.44□□□□□ -0.1
TMEM253-204ENST00000554844 MYOM2P54296 1465 aa14.44□□□□□ -0.1
TMEM253-204ENST00000554844 FOXO3O43524 673 aa14.43□□□□□ -0.1
TMEM253-204ENST00000554844 XPCQ01831 940 aaPredicted RBP14.43□□□□□ -0.1
TMEM253-204ENST00000554844 MARF1Q9Y4F3 1742 aaKnown RBP14.42□□□□□ -0.1
TMEM253-204ENST00000554844 NUTM2FA1L443 756 aa14.42□□□□□ -0.1
TMEM253-204ENST00000554844 HAP1P54257 671 aaPredicted RBP14.42□□□□□ -0.1
TMEM253-204ENST00000554844 RGL3Q3MIN7 710 aa14.42□□□□□ -0.1
TMEM253-204ENST00000554844 CCDC125Q86Z20 511 aa14.42□□□□□ -0.1
TMEM253-204ENST00000554844 ANKRD30BQ9BXX2 1392 aa14.42□□□□□ -0.1
TMEM253-204ENST00000554844 PXDNQ92626 1479 aa14.41□□□□□ -0.1
TMEM253-204ENST00000554844 ADGRF5Q8IZF2 1346 aa14.4□□□□□ -0.1
TMEM253-204ENST00000554844 KIF1AQ12756 1690 aa14.39□□□□□ -0.11
TMEM253-204ENST00000554844 WAPLQ7Z5K2 1190 aa14.39□□□□□ -0.11
TMEM253-204ENST00000554844 GJD4Q96KN9 370 aaPredicted RBP14.39□□□□□ -0.11
TMEM253-204ENST00000554844 TECPR2O15040 1411 aa14.39□□□□□ -0.11
TMEM253-204ENST00000554844 KNDC1Q76NI1 1749 aa14.38□□□□□ -0.11
TMEM253-204ENST00000554844 ABCC11Q96J66 1382 aa14.37□□□□□ -0.11
TMEM253-204ENST00000554844 PSME1Q06323 249 aa14.37□□□□□ -0.11
TMEM253-204ENST00000554844 SF3B2Q13435 895 aaKnown RBP14.37□□□□□ -0.11
TMEM253-204ENST00000554844 UNC5CLQ8IV45 518 aa14.37□□□□□ -0.11
TMEM253-204ENST00000554844 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.37□□□□□ -0.11
TMEM253-204ENST00000554844 BCL9LQ86UU0 1499 aa14.37□□□□□ -0.11
TMEM253-204ENST00000554844 FMN2Q9NZ56 1722 aa14.36□□□□□ -0.11
TMEM253-204ENST00000554844 TMEM132EQ6IEE7 984 aa14.36□□□□□ -0.11
TMEM253-204ENST00000554844 SPATA31A3Q5VYP0 1347 aa14.36□□□□□ -0.11
TMEM253-204ENST00000554844 IFT172Q9UG01 1749 aa14.35□□□□□ -0.11
TMEM253-204ENST00000554844 YTHDC2Q9H6S0 1430 aaKnown RBP14.35□□□□□ -0.11
TMEM253-204ENST00000554844 KRT28Q7Z3Y7 464 aa14.35□□□□□ -0.11
TMEM253-204ENST00000554844 PIK3C2GO75747 1445 aa14.34□□□□□ -0.11
TMEM253-204ENST00000554844 SPATA31E1Q6ZUB1 1445 aa14.34□□□□□ -0.11
TMEM253-204ENST00000554844 LMOD2Q6P5Q4 547 aa14.34□□□□□ -0.11
TMEM253-204ENST00000554844 MPHOSPH9Q99550 1183 aa14.34□□□□□ -0.11
TMEM253-204ENST00000554844 CCDC9Q9Y3X0 531 aaKnown RBP14.34□□□□□ -0.11
TMEM253-204ENST00000554844 ACIN1Q9UKV3 1341 aaKnown RBP14.34□□□□□ -0.11
TMEM253-204ENST00000554844 PLEKHH1Q9ULM0 1364 aa14.34□□□□□ -0.11
TMEM253-204ENST00000554844 USP32Q8NFA0 1604 aa14.33□□□□□ -0.11
TMEM253-204ENST00000554844 RALGAPBQ86X10 1494 aa14.33□□□□□ -0.12
TMEM253-204ENST00000554844 RNF216Q9NWF9 866 aaPredicted RBP14.33□□□□□ -0.12
TMEM253-204ENST00000554844 PHF8Q9UPP1 1060 aa14.33□□□□□ -0.12
TMEM253-204ENST00000554844 DHX57Q6P158 1386 aaKnown RBP14.33□□□□□ -0.12
TMEM253-204ENST00000554844 BLMP54132 1417 aaPredicted RBP14.32□□□□□ -0.12
TMEM253-204ENST00000554844 TNS3Q68CZ2 1445 aa14.32□□□□□ -0.12
TMEM253-204ENST00000554844 SLIT2O94813 1529 aa14.32□□□□□ -0.12
TMEM253-204ENST00000554844 PLEKHG5O94827 1062 aa14.32□□□□□ -0.12
TMEM253-204ENST00000554844 A0A0G2JS52 829 aa14.31□□□□□ -0.12
TMEM253-204ENST00000554844 MYT1Q01538 1121 aa14.31□□□□□ -0.12
TMEM253-204ENST00000554844 SIRT1Q96EB6 747 aa14.31□□□□□ -0.12
TMEM253-204ENST00000554844 ARHGEF10O15013 1369 aa14.31□□□□□ -0.12
TMEM253-204ENST00000554844 POGKQ9P215 609 aa14.3□□□□□ -0.12
TMEM253-204ENST00000554844 GLI3P10071 1580 aa14.3□□□□□ -0.12
TMEM253-204ENST00000554844 EP400Q96L91 3159 aa14.3□□□□□ -0.12
TMEM253-204ENST00000554844 SAFB2Q14151 953 aaKnown RBP eCLIP14.29□□□□□ -0.12
TMEM253-204ENST00000554844 SBNO1A3KN83 1393 aa14.28□□□□□ -0.12
TMEM253-204ENST00000554844 VPS72Q15906 364 aa14.28□□□□□ -0.12
TMEM253-204ENST00000554844 SEPT12Q8IYM1 358 aa14.28□□□□□ -0.12
TMEM253-204ENST00000554844 C14orf93Q9H972 538 aaKnown RBP14.28□□□□□ -0.12
TMEM253-204ENST00000554844 NWD2Q9ULI1 1742 aa14.27□□□□□ -0.12
TMEM253-204ENST00000554844 PLCH1Q4KWH8 1693 aa14.27□□□□□ -0.12
TMEM253-204ENST00000554844 NRXN1Q9ULB1 1477 aa14.27□□□□□ -0.12
TMEM253-204ENST00000554844 CABLES1Q8TDN4 633 aa14.27□□□□□ -0.13
TMEM253-204ENST00000554844 PRAM1Q96QH2 718 aa14.27□□□□□ -0.13
TMEM253-204ENST00000554844 RGPD8O14715 1765 aaPredicted RBP14.27□□□□□ -0.13
TMEM253-204ENST00000554844 EIF3AQ14152 1382 aaKnown RBP14.26□□□□□ -0.13
TMEM253-204ENST00000554844 SRCAPQ6ZRS2 3230 aa14.26□□□□□ -0.13
TMEM253-204ENST00000554844 CFAP70Q5T0N1 1121 aa14.26□□□□□ -0.13
TMEM253-204ENST00000554844 KRT27Q7Z3Y8 459 aa14.26□□□□□ -0.13
TMEM253-204ENST00000554844 ANKARQ7Z5J8 1434 aa14.25□□□□□ -0.13
TMEM253-204ENST00000554844 BRWD3Q6RI45 1802 aa14.25□□□□□ -0.13
TMEM253-204ENST00000554844 GPRASP1Q5JY77 1395 aa14.24□□□□□ -0.13
TMEM253-204ENST00000554844 BAG6P46379 1132 aa14.24□□□□□ -0.13
TMEM253-204ENST00000554844 DEFB132Q7Z7B7 95 aa14.24□□□□□ -0.13
TMEM253-204ENST00000554844 PMFBP1Q8TBY8 1022 aa14.24□□□□□ -0.13
TMEM253-204ENST00000554844 ABCA3Q99758 1704 aa14.24□□□□□ -0.13
TMEM253-204ENST00000554844 DLC1Q96QB1 1528 aa14.23□□□□□ -0.13
TMEM253-204ENST00000554844 ADGRB2O60241 1585 aa14.21□□□□□ -0.14
TMEM253-204ENST00000554844 FAM83GA6ND36 823 aa14.2□□□□□ -0.14
TMEM253-204ENST00000554844 ONECUT3O60422 494 aaPredicted RBP14.2□□□□□ -0.14
TMEM253-204ENST00000554844 FAM98CQ17RN3 349 aaKnown RBP14.2□□□□□ -0.14
TMEM253-204ENST00000554844 BTG4Q9NY30 223 aa14.2□□□□□ -0.14
TMEM253-204ENST00000554844 MINK1Q8N4C8 1332 aaPredicted RBP14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms