RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 DZIP1LQ8IYY4 767 aaKnown RBP15.06■□□□□ 0
XRCC3-208ENST00000554811 DUOX2Q9NRD8 1548 aa15.06■□□□□ 0
XRCC3-208ENST00000554811 ADCY10Q96PN6 1610 aa15.06■□□□□ 0
XRCC3-208ENST00000554811 CYB5RLQ6IPT4 315 aa15.05■□□□□ -0
XRCC3-208ENST00000554811 EVC2Q86UK5 1308 aa15.04■□□□□ -0
XRCC3-208ENST00000554811 PDE3AQ14432 1141 aa15.04■□□□□ -0
XRCC3-208ENST00000554811 ARHGEF5Q12774 1597 aa15.04■□□□□ -0
XRCC3-208ENST00000554811 TPRNQ4KMQ1 711 aa15.03■□□□□ -0
XRCC3-208ENST00000554811 ZNF521Q96K83 1311 aa15.03■□□□□ -0
XRCC3-208ENST00000554811 PRDM15P57071 1507 aaPredicted RBP15.02□□□□□ -0.01
XRCC3-208ENST00000554811 NOB1Q9ULX3 412 aaKnown RBP15.02□□□□□ -0.01
XRCC3-208ENST00000554811 FANCAO15360 1455 aa15.02□□□□□ -0.01
XRCC3-208ENST00000554811 PRAM1Q96QH2 718 aa15.02□□□□□ -0.01
XRCC3-208ENST00000554811 PREX2Q70Z35 1606 aa15.01□□□□□ -0.01
XRCC3-208ENST00000554811 MAST1Q9Y2H9 1570 aa15.01□□□□□ -0.01
XRCC3-208ENST00000554811 ADGRL1O94910 1474 aa15.01□□□□□ -0.01
XRCC3-208ENST00000554811 SSH1Q8WYL5 1049 aa15□□□□□ -0.01
XRCC3-208ENST00000554811 ATP10AO60312 1499 aa15□□□□□ -0.01
XRCC3-208ENST00000554811 ANKRD45Q5TZF3 282 aa15□□□□□ -0.01
XRCC3-208ENST00000554811 HSP90AB1P08238 724 aaKnown RBP14.99□□□□□ -0.01
XRCC3-208ENST00000554811 HSCBQ8IWL3 235 aa14.99□□□□□ -0.01
XRCC3-208ENST00000554811 VGFO15240 615 aaPredicted RBP14.98□□□□□ -0.01
XRCC3-208ENST00000554811 MVPQ14764 893 aaKnown RBP14.98□□□□□ -0.01
XRCC3-208ENST00000554811 TMEM57Q8N5G2 664 aa14.98□□□□□ -0.01
XRCC3-208ENST00000554811 C22orf23Q9BZE7 217 aa14.98□□□□□ -0.01
XRCC3-208ENST00000554811 EIF2AK4Q9P2K8 1649 aaKnown RBP14.98□□□□□ -0.01
XRCC3-208ENST00000554811 HDGFL2Q7Z4V5 671 aaPredicted RBP14.97□□□□□ -0.01
XRCC3-208ENST00000554811 CABP1Q9NZU7 370 aa14.97□□□□□ -0.01
XRCC3-208ENST00000554811 DIAPH1O60610 1272 aaKnown RBP14.97□□□□□ -0.01
XRCC3-208ENST00000554811 TRIM27P14373 513 aa14.97□□□□□ -0.01
XRCC3-208ENST00000554811 NCLP19338 710 aaKnown RBP14.97□□□□□ -0.01
XRCC3-208ENST00000554811 TBC1D2Q9BYX2 928 aa14.97□□□□□ -0.01
XRCC3-208ENST00000554811 PRKAR2BP31323 418 aa14.96□□□□□ -0.01
XRCC3-208ENST00000554811 PIK3C2GO75747 1445 aa14.96□□□□□ -0.01
XRCC3-208ENST00000554811 ABCC2Q92887 1545 aa14.96□□□□□ -0.01
XRCC3-208ENST00000554811 TERF2IPQ9NYB0 399 aa14.96□□□□□ -0.01
XRCC3-208ENST00000554811 TMPOP42166 694 aaKnown RBP14.96□□□□□ -0.02
XRCC3-208ENST00000554811 IDI1Q13907 227 aa14.95□□□□□ -0.02
XRCC3-208ENST00000554811 FBXO31Q5XUX0 539 aaPredicted RBP14.95□□□□□ -0.02
XRCC3-208ENST00000554811 WAPLQ7Z5K2 1190 aa14.95□□□□□ -0.02
XRCC3-208ENST00000554811 MYO5CQ9NQX4 1742 aa14.95□□□□□ -0.02
XRCC3-208ENST00000554811 DCTN1Q14203 1278 aa14.94□□□□□ -0.02
XRCC3-208ENST00000554811 STAC3Q96MF2 364 aa14.94□□□□□ -0.02
XRCC3-208ENST00000554811 ESF1Q9H501 851 aaKnown RBP14.94□□□□□ -0.02
XRCC3-208ENST00000554811 CHD1O14646 1710 aa14.93□□□□□ -0.02
XRCC3-208ENST00000554811 ERVK-7P63135 1459 aa14.93□□□□□ -0.02
XRCC3-208ENST00000554811 TRMT2AQ8IZ69 625 aaKnown RBP14.93□□□□□ -0.02
XRCC3-208ENST00000554811 C14orf93Q9H972 538 aaKnown RBP14.93□□□□□ -0.02
XRCC3-208ENST00000554811 WDR63Q8IWG1 891 aa14.93□□□□□ -0.02
XRCC3-208ENST00000554811 E9PCH4 1651 aa14.92□□□□□ -0.02
XRCC3-208ENST00000554811 ATF7IPQ6VMQ6 1270 aa14.92□□□□□ -0.02
XRCC3-208ENST00000554811 DDX19BQ9UMR2 479 aa14.92□□□□□ -0.02
XRCC3-208ENST00000554811 ZBTB7CA1YPR0 619 aa14.91□□□□□ -0.02
XRCC3-208ENST00000554811 FOXD4L5Q5VV16 416 aaPredicted RBP14.91□□□□□ -0.02
XRCC3-208ENST00000554811 FOXD4L4Q8WXT5 416 aaPredicted RBP14.91□□□□□ -0.02
XRCC3-208ENST00000554811 IPO8O15397 1037 aaKnown RBP14.91□□□□□ -0.02
XRCC3-208ENST00000554811 RRS1Q15050 365 aaKnown RBP14.91□□□□□ -0.02
XRCC3-208ENST00000554811 OSCARQ8IYS5 282 aa14.91□□□□□ -0.02
XRCC3-208ENST00000554811 NAP1L5Q96NT1 182 aaPredicted RBP14.91□□□□□ -0.02
XRCC3-208ENST00000554811 CDK19Q9BWU1 502 aa14.9□□□□□ -0.02
XRCC3-208ENST00000554811 PODXL2Q9NZ53 605 aa14.9□□□□□ -0.02
XRCC3-208ENST00000554811 ZRANB1Q9UGI0 708 aa14.9□□□□□ -0.02
XRCC3-208ENST00000554811 CLTCL1P53675 1640 aa14.89□□□□□ -0.03
XRCC3-208ENST00000554811 IQGAP3Q86VI3 1631 aa14.89□□□□□ -0.03
XRCC3-208ENST00000554811 GOLGA6L3A6NEY3 463 aa14.89□□□□□ -0.03
XRCC3-208ENST00000554811 NOL8Q76FK4 1167 aaKnown RBP14.89□□□□□ -0.03
XRCC3-208ENST00000554811 EMILIN1Q9Y6C2 1016 aa14.89□□□□□ -0.03
XRCC3-208ENST00000554811 SLC4A10Q6U841 1118 aa14.89□□□□□ -0.03
XRCC3-208ENST00000554811 NECTIN2Q92692 538 aa14.89□□□□□ -0.03
XRCC3-208ENST00000554811 USP19O94966 1318 aa14.88□□□□□ -0.03
XRCC3-208ENST00000554811 NCKAP5LQ9HCH0 1330 aa14.88□□□□□ -0.03
XRCC3-208ENST00000554811 FAM83GA6ND36 823 aa14.88□□□□□ -0.03
XRCC3-208ENST00000554811 UNC13BO14795 1591 aa14.88□□□□□ -0.03
XRCC3-208ENST00000554811 POLR3AO14802 1390 aaPredicted RBP14.88□□□□□ -0.03
XRCC3-208ENST00000554811 C14orf37Q86TY3 774 aa14.88□□□□□ -0.03
XRCC3-208ENST00000554811 PTPRTO14522 1441 aa14.88□□□□□ -0.03
XRCC3-208ENST00000554811 FYB1O15117 783 aa14.87□□□□□ -0.03
XRCC3-208ENST00000554811 NGEFQ8N5V2 710 aa14.87□□□□□ -0.03
XRCC3-208ENST00000554811 TBC1D32Q96NH3 1257 aa14.87□□□□□ -0.03
XRCC3-208ENST00000554811 PANK2Q9BZ23 570 aa14.87□□□□□ -0.03
XRCC3-208ENST00000554811 INSRP06213 1382 aa14.86□□□□□ -0.03
XRCC3-208ENST00000554811 TXNDC2Q86VQ3 553 aa14.86□□□□□ -0.03
XRCC3-208ENST00000554811 ABCC1P33527 1531 aa14.86□□□□□ -0.03
XRCC3-208ENST00000554811 ATP7AQ04656 1500 aa14.86□□□□□ -0.03
XRCC3-208ENST00000554811 FOXD4L6Q3SYB3 417 aaPredicted RBP14.86□□□□□ -0.03
XRCC3-208ENST00000554811 FOXD4L3Q6VB84 417 aaPredicted RBP14.86□□□□□ -0.03
XRCC3-208ENST00000554811 TSPYL6Q8N831 410 aa14.86□□□□□ -0.03
XRCC3-208ENST00000554811 MADDQ8WXG6 1647 aa14.85□□□□□ -0.03
XRCC3-208ENST00000554811 ASXL2Q76L83 1435 aa14.85□□□□□ -0.03
XRCC3-208ENST00000554811 RBM42Q9BTD8 480 aaKnown RBP14.85□□□□□ -0.03
XRCC3-208ENST00000554811 NME9Q86XW9 330 aa14.85□□□□□ -0.03
XRCC3-208ENST00000554811 PHACTR3Q96KR7 559 aa14.85□□□□□ -0.03
XRCC3-208ENST00000554811 KDM5AP29375 1690 aaKnown RBP14.84□□□□□ -0.03
XRCC3-208ENST00000554811 TRAK2O60296 914 aa14.84□□□□□ -0.03
XRCC3-208ENST00000554811 A0A1W2PP64 1363 aa14.84□□□□□ -0.03
XRCC3-208ENST00000554811 ZCCHC11Q5TAX3 1644 aaKnown RBP14.84□□□□□ -0.03
XRCC3-208ENST00000554811 MIS18AQ9NYP9 233 aa14.84□□□□□ -0.03
XRCC3-208ENST00000554811 TRIM35Q9UPQ4 493 aa14.84□□□□□ -0.03
XRCC3-208ENST00000554811 SYNMO15061 1565 aa14.83□□□□□ -0.04
XRCC3-208ENST00000554811 CD109Q6YHK3 1445 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms