RNA–Protein interactions for RNA: ENST00000554744.1

SEL1L-203, Transcript of SEL1L, ERAD E3 ligase adaptor subunit, humanhuman

TSL 3

Gene SEL1L, Length 602 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEL1L-203ENST00000554744 ZMYM3Q14202 1370 aa9.65□□□□□ -0.86
SEL1L-203ENST00000554744 ANKRD13DQ6ZTN6 518 aa9.65□□□□□ -0.86
SEL1L-203ENST00000554744 CABP2Q9NPB3 220 aa9.65□□□□□ -0.86
SEL1L-203ENST00000554744 PDAP1Q13442 181 aaKnown RBP9.64□□□□□ -0.87
SEL1L-203ENST00000554744 MLECQ14165 292 aa9.64□□□□□ -0.87
SEL1L-203ENST00000554744 TRIM52Q96A61 297 aa9.64□□□□□ -0.87
SEL1L-203ENST00000554744 E9PCH4 1651 aa9.64□□□□□ -0.87
SEL1L-203ENST00000554744 RIMS1Q86UR5 1692 aaKnown RBP9.64□□□□□ -0.87
SEL1L-203ENST00000554744 PTPRTO14522 1441 aa9.64□□□□□ -0.87
SEL1L-203ENST00000554744 SPATA31D1Q6ZQQ2 1576 aa9.63□□□□□ -0.87
SEL1L-203ENST00000554744 CHRM1P11229 460 aaPredicted RBP9.63□□□□□ -0.87
SEL1L-203ENST00000554744 MPHOSPH9Q99550 1183 aa9.63□□□□□ -0.87
SEL1L-203ENST00000554744 ZSWIM6Q9HCJ5 1215 aa9.63□□□□□ -0.87
SEL1L-203ENST00000554744 PTPRMP28827 1452 aa9.63□□□□□ -0.87
SEL1L-203ENST00000554744 C3P01024 1663 aa9.63□□□□□ -0.87
SEL1L-203ENST00000554744 NOS1P29475 1434 aa9.63□□□□□ -0.87
SEL1L-203ENST00000554744 CLSPNQ9HAW4 1339 aa9.62□□□□□ -0.87
SEL1L-203ENST00000554744 ERVK-7P63135 1459 aa9.62□□□□□ -0.87
SEL1L-203ENST00000554744 SETD1BQ9UPS6 1966 aaKnown RBP9.62□□□□□ -0.87
SEL1L-203ENST00000554744 TRPM2O94759 1503 aa9.61□□□□□ -0.87
SEL1L-203ENST00000554744 PREX1Q8TCU6 1659 aa9.61□□□□□ -0.87
SEL1L-203ENST00000554744 KDM4FA0A1W2PPD8 638 aa9.61□□□□□ -0.87
SEL1L-203ENST00000554744 PKD2Q13563 968 aa9.61□□□□□ -0.87
SEL1L-203ENST00000554744 KLHL34Q8N239 644 aa9.61□□□□□ -0.87
SEL1L-203ENST00000554744 DHX57Q6P158 1386 aaKnown RBP9.61□□□□□ -0.87
SEL1L-203ENST00000554744 SPHKAPQ2M3C7 1700 aa9.6□□□□□ -0.87
SEL1L-203ENST00000554744 PLA2G2EQ9NZK7 142 aa9.6□□□□□ -0.87
SEL1L-203ENST00000554744 NLRP1Q9C000 1473 aa9.59□□□□□ -0.87
SEL1L-203ENST00000554744 KDM5AP29375 1690 aaKnown RBP9.59□□□□□ -0.87
SEL1L-203ENST00000554744 SLC52A1Q9NWF4 448 aa9.59□□□□□ -0.87
SEL1L-203ENST00000554744 PIK3C2BO00750 1634 aa9.59□□□□□ -0.87
SEL1L-203ENST00000554744 ANKRD30BQ9BXX2 1392 aa9.59□□□□□ -0.87
SEL1L-203ENST00000554744 PLA2R1Q13018 1463 aa9.59□□□□□ -0.87
SEL1L-203ENST00000554744 NEURL4Q96JN8 1562 aa9.58□□□□□ -0.88
SEL1L-203ENST00000554744 TNRQ92752 1358 aa9.58□□□□□ -0.88
SEL1L-203ENST00000554744 SYNMO15061 1565 aa9.58□□□□□ -0.88
SEL1L-203ENST00000554744 ZNF142P52746 1687 aaPredicted RBP9.57□□□□□ -0.88
SEL1L-203ENST00000554744 CCDC144AA2RUR9 1427 aa9.56□□□□□ -0.88
SEL1L-203ENST00000554744 A2ML1A8K2U0 1454 aa9.55□□□□□ -0.88
SEL1L-203ENST00000554744 FBXO31Q5XUX0 539 aaPredicted RBP9.55□□□□□ -0.88
SEL1L-203ENST00000554744 GPR153Q6NV75 609 aa9.55□□□□□ -0.88
SEL1L-203ENST00000554744 MYO3AQ8NEV4 1616 aa9.55□□□□□ -0.88
SEL1L-203ENST00000554744 FBXO3Q9UK99 471 aa9.54□□□□□ -0.88
SEL1L-203ENST00000554744 CLTCL1P53675 1640 aa9.53□□□□□ -0.88
SEL1L-203ENST00000554744 ADGRB3O60242 1522 aa9.53□□□□□ -0.88
SEL1L-203ENST00000554744 CFAP65Q6ZU64 1925 aaKnown RBP9.53□□□□□ -0.88
SEL1L-203ENST00000554744 CEBPAP49715 358 aaPredicted RBP9.53□□□□□ -0.88
SEL1L-203ENST00000554744 UHRF1BP1Q6BDS2 1440 aa9.53□□□□□ -0.88
SEL1L-203ENST00000554744 CEP170BQ9Y4F5 1589 aaPredicted RBP9.53□□□□□ -0.88
SEL1L-203ENST00000554744 LSM11P83369 360 aaKnown RBP eCLIP9.52□□□□□ -0.89
SEL1L-203ENST00000554744 SPATA31E1Q6ZUB1 1445 aa9.52□□□□□ -0.89
SEL1L-203ENST00000554744 TMEM131LA2VDJ0 1609 aa9.52□□□□□ -0.89
SEL1L-203ENST00000554744 KIF1BO60333 1816 aa9.52□□□□□ -0.89
SEL1L-203ENST00000554744 UBR1Q8IWV7 1749 aa9.51□□□□□ -0.89
SEL1L-203ENST00000554744 IDI1Q13907 227 aa9.51□□□□□ -0.89
SEL1L-203ENST00000554744 STAC3Q96MF2 364 aa9.51□□□□□ -0.89
SEL1L-203ENST00000554744 UGGT1Q9NYU2 1555 aa9.5□□□□□ -0.89
SEL1L-203ENST00000554744 FKBP8Q14318 412 aa9.5□□□□□ -0.89
SEL1L-203ENST00000554744 HCSTQ9UBK5 93 aa9.5□□□□□ -0.89
SEL1L-203ENST00000554744 TIMELESSQ9UNS1 1208 aa9.5□□□□□ -0.89
SEL1L-203ENST00000554744 SLIT1O75093 1534 aa9.5□□□□□ -0.89
SEL1L-203ENST00000554744 RPGRIP1LQ68CZ1 1315 aa9.5□□□□□ -0.89
SEL1L-203ENST00000554744 LMTK3Q96Q04 1460 aa9.49□□□□□ -0.89
SEL1L-203ENST00000554744 ARHGAP23Q9P227 1491 aa9.49□□□□□ -0.89
SEL1L-203ENST00000554744 THEMISQ8N1K5 641 aaPredicted RBP9.49□□□□□ -0.89
SEL1L-203ENST00000554744 ZFYVE9O95405 1425 aa9.48□□□□□ -0.89
SEL1L-203ENST00000554744 ARSIQ5FYB1 569 aa9.48□□□□□ -0.89
SEL1L-203ENST00000554744 CCER1Q8TC90 406 aaPredicted RBP9.48□□□□□ -0.89
SEL1L-203ENST00000554744 TMEM2Q9UHN6 1383 aa9.48□□□□□ -0.89
SEL1L-203ENST00000554744 ZNF316A6NFI3 1004 aaPredicted RBP9.47□□□□□ -0.89
SEL1L-203ENST00000554744 HDGFP51858 240 aaKnown RBP9.46□□□□□ -0.9
SEL1L-203ENST00000554744 TMEM92Q6UXU6 159 aa9.46□□□□□ -0.9
SEL1L-203ENST00000554744 MICALL2Q8IY33 904 aa9.46□□□□□ -0.9
SEL1L-203ENST00000554744 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.46□□□□□ -0.9
SEL1L-203ENST00000554744 MYOM2P54296 1465 aa9.46□□□□□ -0.9
SEL1L-203ENST00000554744 IFT172Q9UG01 1749 aa9.45□□□□□ -0.9
SEL1L-203ENST00000554744 NEXMIFQ5QGS0 1516 aa9.45□□□□□ -0.9
SEL1L-203ENST00000554744 PPLO60437 1756 aa9.45□□□□□ -0.9
SEL1L-203ENST00000554744 MYO5BQ9ULV0 1848 aa9.45□□□□□ -0.9
SEL1L-203ENST00000554744 RIMS2Q9UQ26 1411 aa9.44□□□□□ -0.9
SEL1L-203ENST00000554744 MED14O60244 1454 aa9.44□□□□□ -0.9
SEL1L-203ENST00000554744 NRXN1Q9ULB1 1477 aa9.44□□□□□ -0.9
SEL1L-203ENST00000554744 SCAF11Q99590 1463 aaKnown RBP9.43□□□□□ -0.9
SEL1L-203ENST00000554744 VGFO15240 615 aaPredicted RBP9.43□□□□□ -0.9
SEL1L-203ENST00000554744 EFCAB3Q8N7B9 438 aa9.43□□□□□ -0.9
SEL1L-203ENST00000554744 TONSLQ96HA7 1378 aa9.42□□□□□ -0.9
SEL1L-203ENST00000554744 ANKLE2Q86XL3 938 aa9.42□□□□□ -0.9
SEL1L-203ENST00000554744 SIN3AQ96ST3 1273 aa9.42□□□□□ -0.9
SEL1L-203ENST00000554744 EID1Q9Y6B2 187 aa9.42□□□□□ -0.9
SEL1L-203ENST00000554744 POLR1AO95602 1720 aaPredicted RBP9.42□□□□□ -0.9
SEL1L-203ENST00000554744 SETBP1Q9Y6X0 1596 aa9.41□□□□□ -0.9
SEL1L-203ENST00000554744 PLEKHG1Q9ULL1 1385 aa9.41□□□□□ -0.9
SEL1L-203ENST00000554744 PBX2P40425 430 aa9.41□□□□□ -0.9
SEL1L-203ENST00000554744 ZNF326Q5BKZ1 582 aaKnown RBP9.41□□□□□ -0.9
SEL1L-203ENST00000554744 CIZ1Q9ULV3 898 aaPredicted RBP9.41□□□□□ -0.9
SEL1L-203ENST00000554744 DIP2AQ14689 1571 aa9.41□□□□□ -0.9
SEL1L-203ENST00000554744 PIK3C2GO75747 1445 aa9.4□□□□□ -0.9
SEL1L-203ENST00000554744 CHGAP10645 457 aaKnown RBP9.4□□□□□ -0.9
SEL1L-203ENST00000554744 L3MBTL2Q969R5 705 aa9.4□□□□□ -0.9
SEL1L-203ENST00000554744 LAMC1P11047 1609 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms