RNA–Protein interactions for RNA: ENST00000554698.5

SDR39U1-208, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best) BASIC

Gene SDR39U1, Length 1,364 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-208ENST00000554698 ARHGEF28Q8N1W1 1705 aaKnown RBP30.52■■■□□ 2.48
SDR39U1-208ENST00000554698 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.51■■■□□ 2.48
SDR39U1-208ENST00000554698 CADPS2Q86UW7 1296 aa30.5■■■□□ 2.47
SDR39U1-208ENST00000554698 FBXO41Q8TF61 875 aa30.5■■■□□ 2.47
SDR39U1-208ENST00000554698 CARD11Q9BXL7 1154 aa30.5■■■□□ 2.47
SDR39U1-208ENST00000554698 ATF3P18847 181 aa30.49■■■□□ 2.47
SDR39U1-208ENST00000554698 SAFB2Q14151 953 aaKnown RBP eCLIP30.48■■■□□ 2.47
SDR39U1-208ENST00000554698 CDC42BPGQ6DT37 1551 aa30.46■■■□□ 2.47
SDR39U1-208ENST00000554698 SLAIN2Q9P270 581 aa30.43■■■□□ 2.46
SDR39U1-208ENST00000554698 EIF3AQ14152 1382 aaKnown RBP30.43■■■□□ 2.46
SDR39U1-208ENST00000554698 CENPJQ9HC77 1338 aaPredicted RBP30.43■■■□□ 2.46
SDR39U1-208ENST00000554698 ADGRB2O60241 1585 aa30.42■■■□□ 2.46
SDR39U1-208ENST00000554698 MST1RQ04912 1400 aa30.42■■■□□ 2.46
SDR39U1-208ENST00000554698 MINK1Q8N4C8 1332 aaPredicted RBP30.4■■■□□ 2.46
SDR39U1-208ENST00000554698 PIP4K2BP78356 416 aa30.39■■■□□ 2.45
SDR39U1-208ENST00000554698 HIRIP3Q9BW71 556 aaPredicted RBP30.37■■■□□ 2.45
SDR39U1-208ENST00000554698 C1orf167Q5SNV9 1468 aa30.35■■■□□ 2.45
SDR39U1-208ENST00000554698 SCAF1Q9H7N4 1312 aaKnown RBP30.34■■■□□ 2.45
SDR39U1-208ENST00000554698 QRICH2Q9H0J4 1663 aa30.32■■■□□ 2.44
SDR39U1-208ENST00000554698 WASLO00401 505 aaPredicted RBP30.32■■■□□ 2.44
SDR39U1-208ENST00000554698 FMN2Q9NZ56 1722 aa30.31■■■□□ 2.44
SDR39U1-208ENST00000554698 USP47Q96K76 1375 aa30.31■■■□□ 2.44
SDR39U1-208ENST00000554698 SBNO2Q9Y2G9 1366 aa30.31■■■□□ 2.44
SDR39U1-208ENST00000554698 BRINP3Q76B58 766 aa30.28■■■□□ 2.44
SDR39U1-208ENST00000554698 ROBO1Q9Y6N7 1651 aa30.27■■■□□ 2.44
SDR39U1-208ENST00000554698 ANKARQ7Z5J8 1434 aa30.27■■■□□ 2.44
SDR39U1-208ENST00000554698 ILDR1Q86SU0 546 aaPredicted RBP30.27■■■□□ 2.44
SDR39U1-208ENST00000554698 ST20-MTHFSA0A0A6YYL1 179 aa30.26■■■□□ 2.43
SDR39U1-208ENST00000554698 NUTM2FA1L443 756 aa30.26■■■□□ 2.43
SDR39U1-208ENST00000554698 TULP4Q9NRJ4 1543 aa30.25■■■□□ 2.43
SDR39U1-208ENST00000554698 CDK19Q9BWU1 502 aa30.25■■■□□ 2.43
SDR39U1-208ENST00000554698 ORAI2Q96SN7 254 aa30.24■■■□□ 2.43
SDR39U1-208ENST00000554698 TESK2Q96S53 571 aa30.22■■■□□ 2.43
SDR39U1-208ENST00000554698 EVC2Q86UK5 1308 aa30.21■■■□□ 2.43
SDR39U1-208ENST00000554698 PRR36Q9H6K5 1346 aa30.21■■■□□ 2.43
SDR39U1-208ENST00000554698 USP32Q8NFA0 1604 aa30.21■■■□□ 2.43
SDR39U1-208ENST00000554698 ESCO1Q5FWF5 840 aa30.2■■■□□ 2.43
SDR39U1-208ENST00000554698 ATP7BP35670 1465 aa30.19■■■□□ 2.42
SDR39U1-208ENST00000554698 HSPA1LP34931 641 aa30.16■■■□□ 2.42
SDR39U1-208ENST00000554698 SRPK2P78362 688 aaKnown RBP30.16■■■□□ 2.42
SDR39U1-208ENST00000554698 NUDT16Q96DE0 195 aaKnown RBP30.16■■■□□ 2.42
SDR39U1-208ENST00000554698 SLC24A1O60721 1099 aa30.15■■■□□ 2.42
SDR39U1-208ENST00000554698 EIF4G2P78344 907 aaKnown RBP eCLIP30.15■■■□□ 2.42
SDR39U1-208ENST00000554698 AHDC1Q5TGY3 1603 aaPredicted RBP30.15■■■□□ 2.42
SDR39U1-208ENST00000554698 CABP2Q9NPB3 220 aa30.15■■■□□ 2.42
SDR39U1-208ENST00000554698 PHF8Q9UPP1 1060 aa30.13■■■□□ 2.41
SDR39U1-208ENST00000554698 CCDC61Q9Y6R9 512 aa30.12■■■□□ 2.41
SDR39U1-208ENST00000554698 HSPA5P11021 654 aaKnown RBP30.11■■■□□ 2.41
SDR39U1-208ENST00000554698 NHSL1Q5SYE7 1610 aa30.11■■■□□ 2.41
SDR39U1-208ENST00000554698 KIF1AQ12756 1690 aa30.1■■■□□ 2.41
SDR39U1-208ENST00000554698 RGPD8O14715 1765 aaPredicted RBP30.1■■■□□ 2.41
SDR39U1-208ENST00000554698 DDX17Q92841 729 aaKnown RBP30.09■■■□□ 2.41
SDR39U1-208ENST00000554698 TOPAZ1Q8N9V7 1692 aa30.08■■■□□ 2.41
SDR39U1-208ENST00000554698 FOXO3O43524 673 aa30.08■■■□□ 2.41
SDR39U1-208ENST00000554698 PUS7Q96PZ0 661 aaKnown RBP30.08■■■□□ 2.41
SDR39U1-208ENST00000554698 NPHP3Q7Z494 1330 aa30.08■■■□□ 2.41
SDR39U1-208ENST00000554698 ZEB1P37275 1124 aaPredicted RBP30.06■■■□□ 2.4
SDR39U1-208ENST00000554698 ATAD2Q6PL18 1390 aa30.06■■■□□ 2.4
SDR39U1-208ENST00000554698 DISP3Q9P2K9 1392 aa30.06■■■□□ 2.4
SDR39U1-208ENST00000554698 PHLPP1O60346 1717 aa30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 ITSN1Q15811 1721 aa30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 PLEKHG3A1L390 1219 aa30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 TMF1P82094 1093 aa30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 PMFBP1Q8TBY8 1022 aa30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 SOS2Q07890 1332 aaPredicted RBP30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 COL16A1Q07092 1604 aaPredicted RBP30.05■■■□□ 2.4
SDR39U1-208ENST00000554698 PPIP5K1Q6PFW1 1433 aa30.04■■■□□ 2.4
SDR39U1-208ENST00000554698 PXDNQ92626 1479 aa30.03■■■□□ 2.4
SDR39U1-208ENST00000554698 POLR3AO14802 1390 aaPredicted RBP30.02■■■□□ 2.4
SDR39U1-208ENST00000554698 CABP1Q9NZU7 370 aa30■■■□□ 2.39
SDR39U1-208ENST00000554698 NGDNQ8NEJ9 315 aaKnown RBP29.99■■■□□ 2.39
SDR39U1-208ENST00000554698 XPCQ01831 940 aaPredicted RBP29.98■■■□□ 2.39
SDR39U1-208ENST00000554698 ACEP12821 1306 aa29.97■■■□□ 2.39
SDR39U1-208ENST00000554698 CDCA8Q53HL2 280 aa29.97■■■□□ 2.39
SDR39U1-208ENST00000554698 KRT28Q7Z3Y7 464 aa29.97■■■□□ 2.39
SDR39U1-208ENST00000554698 PSME1Q06323 249 aa29.96■■■□□ 2.39
SDR39U1-208ENST00000554698 LRRC59Q96AG4 307 aaKnown RBP29.96■■■□□ 2.39
SDR39U1-208ENST00000554698 JCADQ9P266 1359 aa29.93■■■□□ 2.38
SDR39U1-208ENST00000554698 SBNO1A3KN83 1393 aa29.92■■■□□ 2.38
SDR39U1-208ENST00000554698 NINLQ9Y2I6 1382 aa29.91■■■□□ 2.38
SDR39U1-208ENST00000554698 SLC12A5Q9H2X9 1139 aa29.9■■■□□ 2.38
SDR39U1-208ENST00000554698 CPSF1Q10570 1443 aaKnown RBP29.89■■■□□ 2.38
SDR39U1-208ENST00000554698 SPATA31A3Q5VYP0 1347 aa29.89■■■□□ 2.38
SDR39U1-208ENST00000554698 TMC1Q8TDI8 760 aa29.89■■■□□ 2.37
SDR39U1-208ENST00000554698 PNPLA6Q8IY17 1366 aa29.88■■■□□ 2.37
SDR39U1-208ENST00000554698 CD163L1Q9NR16 1453 aa29.87■■■□□ 2.37
SDR39U1-208ENST00000554698 TNS3Q68CZ2 1445 aa29.87■■■□□ 2.37
SDR39U1-208ENST00000554698 TRPM3Q9HCF6 1732 aaPredicted RBP29.86■■■□□ 2.37
SDR39U1-208ENST00000554698 USP6P35125 1406 aa29.86■■■□□ 2.37
SDR39U1-208ENST00000554698 C11orf95C9JLR9 678 aaPredicted RBP29.86■■■□□ 2.37
SDR39U1-208ENST00000554698 ZNF692Q9BU19 519 aaPredicted RBP29.86■■■□□ 2.37
SDR39U1-208ENST00000554698 SHPRHQ149N8 1683 aa29.85■■■□□ 2.37
SDR39U1-208ENST00000554698 BRD4O60885 1362 aaPredicted RBP29.84■■■□□ 2.37
SDR39U1-208ENST00000554698 SSH2Q76I76 1423 aa29.83■■■□□ 2.37
SDR39U1-208ENST00000554698 TERF2IPQ9NYB0 399 aa29.82■■■□□ 2.36
SDR39U1-208ENST00000554698 SPATA31A6Q5VVP1 1343 aa29.81■■■□□ 2.36
SDR39U1-208ENST00000554698 ARHGEF10O15013 1369 aa29.81■■■□□ 2.36
SDR39U1-208ENST00000554698 HDGFL2Q7Z4V5 671 aaPredicted RBP29.8■■■□□ 2.36
SDR39U1-208ENST00000554698 A0A1W2PP64 1363 aa29.8■■■□□ 2.36
SDR39U1-208ENST00000554698 KTN1Q86UP2 1357 aaKnown RBP29.8■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms