RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 ROBO2Q9HCK4 1378 aa19.95■□□□□ 0.78
SHOX2-206ENST00000554685 PUS7Q96PZ0 661 aaKnown RBP19.94■□□□□ 0.78
SHOX2-206ENST00000554685 CHD2O14647 1828 aaKnown RBP19.94■□□□□ 0.78
SHOX2-206ENST00000554685 NWD1Q149M9 1564 aa19.94■□□□□ 0.78
SHOX2-206ENST00000554685 DISP3Q9P2K9 1392 aa19.94■□□□□ 0.78
SHOX2-206ENST00000554685 C11orf95C9JLR9 678 aaPredicted RBP19.93■□□□□ 0.78
SHOX2-206ENST00000554685 SAFB2Q14151 953 aaKnown RBP eCLIP19.93■□□□□ 0.78
SHOX2-206ENST00000554685 WAPLQ7Z5K2 1190 aa19.92■□□□□ 0.78
SHOX2-206ENST00000554685 NKTRP30414 1462 aaKnown RBP19.92■□□□□ 0.78
SHOX2-206ENST00000554685 POLR3GLQ9BT43 218 aa19.91■□□□□ 0.78
SHOX2-206ENST00000554685 PLEKHH1Q9ULM0 1364 aa19.91■□□□□ 0.78
SHOX2-206ENST00000554685 MINK1Q8N4C8 1332 aaPredicted RBP19.9■□□□□ 0.78
SHOX2-206ENST00000554685 TULP4Q9NRJ4 1543 aa19.88■□□□□ 0.77
SHOX2-206ENST00000554685 ADGRB2O60241 1585 aa19.87■□□□□ 0.77
SHOX2-206ENST00000554685 DDX10Q13206 875 aaKnown RBP19.87■□□□□ 0.77
SHOX2-206ENST00000554685 ATAD2Q6PL18 1390 aa19.86■□□□□ 0.77
SHOX2-206ENST00000554685 DIEXFQ68CQ4 756 aaKnown RBP19.86■□□□□ 0.77
SHOX2-206ENST00000554685 WASLO00401 505 aaPredicted RBP19.84■□□□□ 0.77
SHOX2-206ENST00000554685 SRPK2P78362 688 aaKnown RBP19.84■□□□□ 0.77
SHOX2-206ENST00000554685 NCOA3Q9Y6Q9 1424 aa19.84■□□□□ 0.77
SHOX2-206ENST00000554685 NINLQ9Y2I6 1382 aa19.83■□□□□ 0.77
SHOX2-206ENST00000554685 CDK19Q9BWU1 502 aa19.83■□□□□ 0.77
SHOX2-206ENST00000554685 PROSER2Q86WR7 435 aaPredicted RBP19.82■□□□□ 0.76
SHOX2-206ENST00000554685 ADGRL3Q9HAR2 1447 aa19.81■□□□□ 0.76
SHOX2-206ENST00000554685 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.81■□□□□ 0.76
SHOX2-206ENST00000554685 CABP2Q9NPB3 220 aa19.79■□□□□ 0.76
SHOX2-206ENST00000554685 C14orf37Q86TY3 774 aa19.78■□□□□ 0.76
SHOX2-206ENST00000554685 CDC42BPGQ6DT37 1551 aa19.78■□□□□ 0.76
SHOX2-206ENST00000554685 ZNF335Q9H4Z2 1342 aaPredicted RBP19.76■□□□□ 0.75
SHOX2-206ENST00000554685 TMEM94Q12767 1356 aa19.75■□□□□ 0.75
SHOX2-206ENST00000554685 TMC1Q8TDI8 760 aa19.75■□□□□ 0.75
SHOX2-206ENST00000554685 ANKARQ7Z5J8 1434 aa19.75■□□□□ 0.75
SHOX2-206ENST00000554685 MYOM1P52179 1685 aa19.75■□□□□ 0.75
SHOX2-206ENST00000554685 NALCNQ8IZF0 1738 aa19.74■□□□□ 0.75
SHOX2-206ENST00000554685 STRCP1A6NGW2 1772 aa19.74■□□□□ 0.75
SHOX2-206ENST00000554685 DCCP43146 1447 aa19.74■□□□□ 0.75
SHOX2-206ENST00000554685 NUDT16Q96DE0 195 aaKnown RBP19.73■□□□□ 0.75
SHOX2-206ENST00000554685 C19orf44Q9H6X5 657 aa19.73■□□□□ 0.75
SHOX2-206ENST00000554685 PANK3Q9H999 370 aa19.73■□□□□ 0.75
SHOX2-206ENST00000554685 CCDC61Q9Y6R9 512 aa19.73■□□□□ 0.75
SHOX2-206ENST00000554685 ATP7BP35670 1465 aa19.73■□□□□ 0.75
SHOX2-206ENST00000554685 TERF2IPQ9NYB0 399 aa19.72■□□□□ 0.75
SHOX2-206ENST00000554685 ANKRD36BQ8N2N9 1353 aa19.71■□□□□ 0.75
SHOX2-206ENST00000554685 LRRC7Q96NW7 1537 aa19.71■□□□□ 0.75
SHOX2-206ENST00000554685 MSH6P52701 1360 aa19.7■□□□□ 0.74
SHOX2-206ENST00000554685 HDGFL2Q7Z4V5 671 aaPredicted RBP19.7■□□□□ 0.74
SHOX2-206ENST00000554685 SLC12A5Q9H2X9 1139 aa19.7■□□□□ 0.74
SHOX2-206ENST00000554685 FMN2Q9NZ56 1722 aa19.7■□□□□ 0.74
SHOX2-206ENST00000554685 PPIP5K1Q6PFW1 1433 aa19.69■□□□□ 0.74
SHOX2-206ENST00000554685 ANP32CO43423 234 aa19.69■□□□□ 0.74
SHOX2-206ENST00000554685 RBM33Q96EV2 1170 aaKnown RBP19.69■□□□□ 0.74
SHOX2-206ENST00000554685 ATF3P18847 181 aa19.68■□□□□ 0.74
SHOX2-206ENST00000554685 PRR36Q9H6K5 1346 aa19.68■□□□□ 0.74
SHOX2-206ENST00000554685 CADPS2Q86UW7 1296 aa19.67■□□□□ 0.74
SHOX2-206ENST00000554685 CABP1Q9NZU7 370 aa19.67■□□□□ 0.74
SHOX2-206ENST00000554685 KNSTRNQ9Y448 316 aa19.67■□□□□ 0.74
SHOX2-206ENST00000554685 ITSN1Q15811 1721 aa19.67■□□□□ 0.74
SHOX2-206ENST00000554685 TOPAZ1Q8N9V7 1692 aa19.66■□□□□ 0.74
SHOX2-206ENST00000554685 PLEKHG3A1L390 1219 aa19.66■□□□□ 0.74
SHOX2-206ENST00000554685 PER1O15534 1290 aaPredicted RBP19.64■□□□□ 0.73
SHOX2-206ENST00000554685 ZNF692Q9BU19 519 aaPredicted RBP19.64■□□□□ 0.73
SHOX2-206ENST00000554685 A0A1W2PP64 1363 aa19.64■□□□□ 0.73
SHOX2-206ENST00000554685 USP32Q8NFA0 1604 aa19.63■□□□□ 0.73
SHOX2-206ENST00000554685 KTN1Q86UP2 1357 aaKnown RBP19.63■□□□□ 0.73
SHOX2-206ENST00000554685 NPC1L1Q9UHC9 1359 aa19.63■□□□□ 0.73
SHOX2-206ENST00000554685 NUTM2FA1L443 756 aa19.63■□□□□ 0.73
SHOX2-206ENST00000554685 NSD3Q9BZ95 1437 aa19.62■□□□□ 0.73
SHOX2-206ENST00000554685 CD163L1Q9NR16 1453 aa19.61■□□□□ 0.73
SHOX2-206ENST00000554685 CPSF1Q10570 1443 aaKnown RBP19.61■□□□□ 0.73
SHOX2-206ENST00000554685 LTBP4Q8N2S1 1624 aa19.61■□□□□ 0.73
SHOX2-206ENST00000554685 CGNL1Q0VF96 1302 aa19.6■□□□□ 0.73
SHOX2-206ENST00000554685 CARD14Q9BXL6 1004 aa19.6■□□□□ 0.73
SHOX2-206ENST00000554685 C1orf167Q5SNV9 1468 aa19.6■□□□□ 0.73
SHOX2-206ENST00000554685 EDC4Q6P2E9 1401 aaKnown RBP19.59■□□□□ 0.73
SHOX2-206ENST00000554685 POLR3AO14802 1390 aaPredicted RBP19.59■□□□□ 0.73
SHOX2-206ENST00000554685 NSD2O96028 1365 aa19.59■□□□□ 0.73
SHOX2-206ENST00000554685 NGDNQ8NEJ9 315 aaKnown RBP19.59■□□□□ 0.73
SHOX2-206ENST00000554685 PHF8Q9UPP1 1060 aa19.59■□□□□ 0.73
SHOX2-206ENST00000554685 XIRP1Q702N8 1843 aaKnown RBP19.59■□□□□ 0.73
SHOX2-206ENST00000554685 MST1RQ04912 1400 aa19.59■□□□□ 0.73
SHOX2-206ENST00000554685 ACEP12821 1306 aa19.58■□□□□ 0.73
SHOX2-206ENST00000554685 RALBP1Q15311 655 aa19.57■□□□□ 0.72
SHOX2-206ENST00000554685 ESCO1Q5FWF5 840 aa19.57■□□□□ 0.72
SHOX2-206ENST00000554685 AMER1Q5JTC6 1135 aaPredicted RBP19.57■□□□□ 0.72
SHOX2-206ENST00000554685 PRKRIP1Q9H875 184 aaPredicted RBP19.57■□□□□ 0.72
SHOX2-206ENST00000554685 BRD4O60885 1362 aaPredicted RBP19.57■□□□□ 0.72
SHOX2-206ENST00000554685 KIF1AQ12756 1690 aa19.56■□□□□ 0.72
SHOX2-206ENST00000554685 AKAP12Q02952 1782 aa19.55■□□□□ 0.72
SHOX2-206ENST00000554685 MIER1Q8N108 512 aa19.55■□□□□ 0.72
SHOX2-206ENST00000554685 PMFBP1Q8TBY8 1022 aa19.55■□□□□ 0.72
SHOX2-206ENST00000554685 MON2Q7Z3U7 1717 aa19.54■□□□□ 0.72
SHOX2-206ENST00000554685 USP6P35125 1406 aa19.54■□□□□ 0.72
SHOX2-206ENST00000554685 RGPD8O14715 1765 aaPredicted RBP19.53■□□□□ 0.72
SHOX2-206ENST00000554685 CC2D1BQ5T0F9 858 aaKnown RBP19.53■□□□□ 0.72
SHOX2-206ENST00000554685 PARD3Q8TEW0 1356 aa19.52■□□□□ 0.72
SHOX2-206ENST00000554685 TTC21AQ8NDW8 1320 aa19.51■□□□□ 0.71
SHOX2-206ENST00000554685 PPP4R3CPQ6ZMV5 832 aa19.51■□□□□ 0.71
SHOX2-206ENST00000554685 CCER2I3L3R5 266 aa19.5■□□□□ 0.71
SHOX2-206ENST00000554685 ORAI2Q96SN7 254 aa19.5■□□□□ 0.71
SHOX2-206ENST00000554685 SLAIN2Q9P270 581 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms