RNA–Protein interactions for RNA: ENST00000554511.1

PPP4R3A-203, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 3

Gene PPP4R3A, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-203ENST00000554511 COL16A1Q07092 1604 aaPredicted RBP25.74■■□□□ 1.71
PPP4R3A-203ENST00000554511 LRPPRCP42704 1394 aaKnown RBP25.73■■□□□ 1.71
PPP4R3A-203ENST00000554511 STK26Q9P289 416 aa25.73■■□□□ 1.71
PPP4R3A-203ENST00000554511 YTHDC2Q9H6S0 1430 aaKnown RBP25.71■■□□□ 1.71
PPP4R3A-203ENST00000554511 ABCC11Q96J66 1382 aa25.71■■□□□ 1.71
PPP4R3A-203ENST00000554511 SIRT1Q96EB6 747 aa25.71■■□□□ 1.71
PPP4R3A-203ENST00000554511 ADGRB1O14514 1584 aa25.7■■□□□ 1.71
PPP4R3A-203ENST00000554511 BRINP3Q76B58 766 aa25.7■■□□□ 1.7
PPP4R3A-203ENST00000554511 DCCP43146 1447 aa25.7■■□□□ 1.7
PPP4R3A-203ENST00000554511 TRAK1Q9UPV9 953 aa25.69■■□□□ 1.7
PPP4R3A-203ENST00000554511 EIF3AQ14152 1382 aaKnown RBP25.69■■□□□ 1.7
PPP4R3A-203ENST00000554511 SETD1AO15047 1707 aaKnown RBP25.68■■□□□ 1.7
PPP4R3A-203ENST00000554511 AHDC1Q5TGY3 1603 aaPredicted RBP25.68■■□□□ 1.7
PPP4R3A-203ENST00000554511 SPATA31A6Q5VVP1 1343 aa25.66■■□□□ 1.7
PPP4R3A-203ENST00000554511 EIF4G2P78344 907 aaKnown RBP eCLIP25.66■■□□□ 1.7
PPP4R3A-203ENST00000554511 POGKQ9P215 609 aa25.65■■□□□ 1.7
PPP4R3A-203ENST00000554511 MST1RQ04912 1400 aa25.64■■□□□ 1.7
PPP4R3A-203ENST00000554511 ASXL1Q8IXJ9 1541 aa25.64■■□□□ 1.7
PPP4R3A-203ENST00000554511 SLC24A1O60721 1099 aa25.63■■□□□ 1.69
PPP4R3A-203ENST00000554511 TECPR2O15040 1411 aa25.63■■□□□ 1.69
PPP4R3A-203ENST00000554511 ADGRL3Q9HAR2 1447 aa25.63■■□□□ 1.69
PPP4R3A-203ENST00000554511 LRP6O75581 1613 aa25.62■■□□□ 1.69
PPP4R3A-203ENST00000554511 MEX3CQ5U5Q3 659 aaKnown RBP25.61■■□□□ 1.69
PPP4R3A-203ENST00000554511 DLC1Q96QB1 1528 aa25.61■■□□□ 1.69
PPP4R3A-203ENST00000554511 USP47Q96K76 1375 aa25.6■■□□□ 1.69
PPP4R3A-203ENST00000554511 PRAM1Q96QH2 718 aa25.6■■□□□ 1.69
PPP4R3A-203ENST00000554511 PTCH1Q13635 1447 aa25.59■■□□□ 1.69
PPP4R3A-203ENST00000554511 CENPJQ9HC77 1338 aaPredicted RBP25.59■■□□□ 1.69
PPP4R3A-203ENST00000554511 SHPRHQ149N8 1683 aa25.58■■□□□ 1.68
PPP4R3A-203ENST00000554511 KNDC1Q76NI1 1749 aa25.57■■□□□ 1.68
PPP4R3A-203ENST00000554511 NALCNQ8IZF0 1738 aa25.56■■□□□ 1.68
PPP4R3A-203ENST00000554511 ROBO2Q9HCK4 1378 aa25.56■■□□□ 1.68
PPP4R3A-203ENST00000554511 ST20-MTHFSA0A0A6YYL1 179 aa25.55■■□□□ 1.68
PPP4R3A-203ENST00000554511 WAPLQ7Z5K2 1190 aa25.55■■□□□ 1.68
PPP4R3A-203ENST00000554511 NUTM2BA6NNL0 878 aaPredicted RBP25.54■■□□□ 1.68
PPP4R3A-203ENST00000554511 NUTM2EB1AL46 878 aaPredicted RBP25.54■■□□□ 1.68
PPP4R3A-203ENST00000554511 NUTM2AQ8IVF1 878 aaPredicted RBP25.54■■□□□ 1.68
PPP4R3A-203ENST00000554511 DDX17Q92841 729 aaKnown RBP25.54■■□□□ 1.68
PPP4R3A-203ENST00000554511 HSPA5P11021 654 aaKnown RBP25.53■■□□□ 1.68
PPP4R3A-203ENST00000554511 ZNF772Q68DY9 489 aaPredicted RBP25.53■■□□□ 1.68
PPP4R3A-203ENST00000554511 LRRC59Q96AG4 307 aaKnown RBP25.53■■□□□ 1.68
PPP4R3A-203ENST00000554511 NHSL1Q5SYE7 1610 aa25.52■■□□□ 1.68
PPP4R3A-203ENST00000554511 SAFB2Q14151 953 aaKnown RBP eCLIP25.51■■□□□ 1.67
PPP4R3A-203ENST00000554511 C1orf167Q5SNV9 1468 aa25.5■■□□□ 1.67
PPP4R3A-203ENST00000554511 ARHGEF28Q8N1W1 1705 aaKnown RBP25.49■■□□□ 1.67
PPP4R3A-203ENST00000554511 PLEKHH1Q9ULM0 1364 aa25.47■■□□□ 1.67
PPP4R3A-203ENST00000554511 SBNO2Q9Y2G9 1366 aa25.46■■□□□ 1.67
PPP4R3A-203ENST00000554511 TMF1P82094 1093 aa25.46■■□□□ 1.67
PPP4R3A-203ENST00000554511 MINK1Q8N4C8 1332 aaPredicted RBP25.45■■□□□ 1.66
PPP4R3A-203ENST00000554511 CDCA8Q53HL2 280 aa25.45■■□□□ 1.66
PPP4R3A-203ENST00000554511 ORAI2Q96SN7 254 aa25.45■■□□□ 1.66
PPP4R3A-203ENST00000554511 EVC2Q86UK5 1308 aa25.44■■□□□ 1.66
PPP4R3A-203ENST00000554511 PNPLA6Q8IY17 1366 aa25.44■■□□□ 1.66
PPP4R3A-203ENST00000554511 TESK2Q96S53 571 aa25.42■■□□□ 1.66
PPP4R3A-203ENST00000554511 AFF2P51816 1311 aa25.41■■□□□ 1.66
PPP4R3A-203ENST00000554511 HIRIP3Q9BW71 556 aaPredicted RBP25.41■■□□□ 1.66
PPP4R3A-203ENST00000554511 SOS2Q07890 1332 aaPredicted RBP25.39■■□□□ 1.66
PPP4R3A-203ENST00000554511 QRICH2Q9H0J4 1663 aa25.39■■□□□ 1.66
PPP4R3A-203ENST00000554511 WASLO00401 505 aaPredicted RBP25.39■■□□□ 1.66
PPP4R3A-203ENST00000554511 RXRBP28702 533 aa25.39■■□□□ 1.66
PPP4R3A-203ENST00000554511 C8orf37Q96NL8 207 aa25.38■■□□□ 1.65
PPP4R3A-203ENST00000554511 PUS7Q96PZ0 661 aaKnown RBP25.38■■□□□ 1.65
PPP4R3A-203ENST00000554511 CDK19Q9BWU1 502 aa25.37■■□□□ 1.65
PPP4R3A-203ENST00000554511 SRPK2P78362 688 aaKnown RBP25.36■■□□□ 1.65
PPP4R3A-203ENST00000554511 ADAMTS2O95450 1211 aa25.34■■□□□ 1.65
PPP4R3A-203ENST00000554511 ESCO1Q5FWF5 840 aa25.34■■□□□ 1.65
PPP4R3A-203ENST00000554511 CDC42BPGQ6DT37 1551 aa25.33■■□□□ 1.65
PPP4R3A-203ENST00000554511 ADGRB2O60241 1585 aa25.32■■□□□ 1.64
PPP4R3A-203ENST00000554511 NGLY1Q96IV0 654 aa25.3■■□□□ 1.64
PPP4R3A-203ENST00000554511 QTRT2Q9H974 415 aaKnown RBP25.3■■□□□ 1.64
PPP4R3A-203ENST00000554511 NPHP3Q7Z494 1330 aa25.3■■□□□ 1.64
PPP4R3A-203ENST00000554511 NUTM2FA1L443 756 aa25.29■■□□□ 1.64
PPP4R3A-203ENST00000554511 ZNF316A6NFI3 1004 aaPredicted RBP25.29■■□□□ 1.64
PPP4R3A-203ENST00000554511 CABP2Q9NPB3 220 aa25.29■■□□□ 1.64
PPP4R3A-203ENST00000554511 CDK12Q9NYV4 1490 aaPredicted RBP25.28■■□□□ 1.64
PPP4R3A-203ENST00000554511 UPF1Q92900 1129 aaKnown RBP eCLIP25.28■■□□□ 1.64
PPP4R3A-203ENST00000554511 ATAD2Q6PL18 1390 aa25.28■■□□□ 1.64
PPP4R3A-203ENST00000554511 FOXO3O43524 673 aa25.27■■□□□ 1.64
PPP4R3A-203ENST00000554511 NUDT16Q96DE0 195 aaKnown RBP25.27■■□□□ 1.64
PPP4R3A-203ENST00000554511 RBM6P78332 1123 aaKnown RBP25.26■■□□□ 1.63
PPP4R3A-203ENST00000554511 POLR3GLQ9BT43 218 aa25.26■■□□□ 1.63
PPP4R3A-203ENST00000554511 CCDC61Q9Y6R9 512 aa25.26■■□□□ 1.63
PPP4R3A-203ENST00000554511 XPCQ01831 940 aaPredicted RBP25.25■■□□□ 1.63
PPP4R3A-203ENST00000554511 ANKARQ7Z5J8 1434 aa25.25■■□□□ 1.63
PPP4R3A-203ENST00000554511 TULP4Q9NRJ4 1543 aa25.25■■□□□ 1.63
PPP4R3A-203ENST00000554511 PXDNQ92626 1479 aa25.23■■□□□ 1.63
PPP4R3A-203ENST00000554511 C11orf95C9JLR9 678 aaPredicted RBP25.22■■□□□ 1.63
PPP4R3A-203ENST00000554511 USP21Q9UK80 565 aa25.22■■□□□ 1.63
PPP4R3A-203ENST00000554511 KIF7Q2M1P5 1343 aa25.21■■□□□ 1.63
PPP4R3A-203ENST00000554511 TMC1Q8TDI8 760 aa25.21■■□□□ 1.63
PPP4R3A-203ENST00000554511 COL22A1Q8NFW1 1626 aaPredicted RBP25.21■■□□□ 1.63
PPP4R3A-203ENST00000554511 NINLQ9Y2I6 1382 aa25.2■■□□□ 1.63
PPP4R3A-203ENST00000554511 FMN2Q9NZ56 1722 aa25.2■■□□□ 1.62
PPP4R3A-203ENST00000554511 RGS12O14924 1447 aa25.2■■□□□ 1.62
PPP4R3A-203ENST00000554511 CCDC7Q96M83 1385 aa25.19■■□□□ 1.62
PPP4R3A-203ENST00000554511 FNBP4Q8N3X1 1017 aaPredicted RBP25.19■■□□□ 1.62
PPP4R3A-203ENST00000554511 WASHC2AQ641Q2 1341 aa25.17■■□□□ 1.62
PPP4R3A-203ENST00000554511 CABP1Q9NZU7 370 aa25.17■■□□□ 1.62
PPP4R3A-203ENST00000554511 TRPC5Q9UL62 973 aaPredicted RBP25.17■■□□□ 1.62
PPP4R3A-203ENST00000554511 PRR36Q9H6K5 1346 aa25.16■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms