RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 TECPR2O15040 1411 aa16.36■□□□□ 0.21
ABCD4-221ENST00000554453 PIK3C2GO75747 1445 aa16.36■□□□□ 0.21
ABCD4-221ENST00000554453 STAC3Q96MF2 364 aa16.35■□□□□ 0.21
ABCD4-221ENST00000554453 LRP6O75581 1613 aa16.34■□□□□ 0.21
ABCD4-221ENST00000554453 SHPRHQ149N8 1683 aa16.34■□□□□ 0.21
ABCD4-221ENST00000554453 ESCO1Q5FWF5 840 aa16.34■□□□□ 0.21
ABCD4-221ENST00000554453 IFT172Q9UG01 1749 aa16.33■□□□□ 0.21
ABCD4-221ENST00000554453 DHX57Q6P158 1386 aaKnown RBP16.33■□□□□ 0.2
ABCD4-221ENST00000554453 YTHDC2Q9H6S0 1430 aaKnown RBP16.33■□□□□ 0.2
ABCD4-221ENST00000554453 NHSL1Q5SYE7 1610 aa16.33■□□□□ 0.2
ABCD4-221ENST00000554453 PNPLA6Q8IY17 1366 aa16.32■□□□□ 0.2
ABCD4-221ENST00000554453 NRXN1Q9ULB1 1477 aa16.32■□□□□ 0.2
ABCD4-221ENST00000554453 PLEKHH1Q9ULM0 1364 aa16.31■□□□□ 0.2
ABCD4-221ENST00000554453 FOXO3O43524 673 aa16.3■□□□□ 0.2
ABCD4-221ENST00000554453 DCAF11Q8TEB1 546 aa16.3■□□□□ 0.2
ABCD4-221ENST00000554453 KDM2AQ9Y2K7 1162 aa16.3■□□□□ 0.2
ABCD4-221ENST00000554453 NPHP3Q7Z494 1330 aa16.29■□□□□ 0.2
ABCD4-221ENST00000554453 NUTM2FA1L443 756 aa16.29■□□□□ 0.2
ABCD4-221ENST00000554453 MYOM2P54296 1465 aa16.29■□□□□ 0.2
ABCD4-221ENST00000554453 LAMC1P11047 1609 aa16.28■□□□□ 0.2
ABCD4-221ENST00000554453 RXRBP28702 533 aa16.28■□□□□ 0.2
ABCD4-221ENST00000554453 AFF2P51816 1311 aa16.27■□□□□ 0.2
ABCD4-221ENST00000554453 NGLY1Q96IV0 654 aa16.26■□□□□ 0.19
ABCD4-221ENST00000554453 C8orf37Q96NL8 207 aa16.26■□□□□ 0.19
ABCD4-221ENST00000554453 PRAM1Q96QH2 718 aa16.26■□□□□ 0.19
ABCD4-221ENST00000554453 QTRT2Q9H974 415 aaKnown RBP16.26■□□□□ 0.19
ABCD4-221ENST00000554453 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
ABCD4-221ENST00000554453 POGKQ9P215 609 aa16.25■□□□□ 0.19
ABCD4-221ENST00000554453 KNDC1Q76NI1 1749 aa16.25■□□□□ 0.19
ABCD4-221ENST00000554453 ADAMTS2O95450 1211 aa16.24■□□□□ 0.19
ABCD4-221ENST00000554453 XPCQ01831 940 aaPredicted RBP16.23■□□□□ 0.19
ABCD4-221ENST00000554453 SAFB2Q14151 953 aaKnown RBP eCLIP16.23■□□□□ 0.19
ABCD4-221ENST00000554453 TRAK1Q9UPV9 953 aa16.23■□□□□ 0.19
ABCD4-221ENST00000554453 RBM6P78332 1123 aaKnown RBP16.22■□□□□ 0.19
ABCD4-221ENST00000554453 KRT28Q7Z3Y7 464 aa16.22■□□□□ 0.19
ABCD4-221ENST00000554453 FNBP4Q8N3X1 1017 aaPredicted RBP16.22■□□□□ 0.19
ABCD4-221ENST00000554453 PHF8Q9UPP1 1060 aa16.21■□□□□ 0.19
ABCD4-221ENST00000554453 PSME1Q06323 249 aa16.2■□□□□ 0.18
ABCD4-221ENST00000554453 PXDNQ92626 1479 aa16.2■□□□□ 0.18
ABCD4-221ENST00000554453 SPATA31A3Q5VYP0 1347 aa16.19■□□□□ 0.18
ABCD4-221ENST00000554453 DLC1Q96QB1 1528 aa16.19■□□□□ 0.18
ABCD4-221ENST00000554453 USP21Q9UK80 565 aa16.18■□□□□ 0.18
ABCD4-221ENST00000554453 ADGRB1O14514 1584 aa16.17■□□□□ 0.18
ABCD4-221ENST00000554453 FMN2Q9NZ56 1722 aa16.17■□□□□ 0.18
ABCD4-221ENST00000554453 TRPC5Q9UL62 973 aaPredicted RBP16.17■□□□□ 0.18
ABCD4-221ENST00000554453 CDK12Q9NYV4 1490 aaPredicted RBP16.16■□□□□ 0.18
ABCD4-221ENST00000554453 UPF1Q92900 1129 aaKnown RBP eCLIP16.16■□□□□ 0.18
ABCD4-221ENST00000554453 RGPD8O14715 1765 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-221ENST00000554453 WASLO00401 505 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-221ENST00000554453 HIRIP3Q9BW71 556 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-221ENST00000554453 MINK1Q8N4C8 1332 aaPredicted RBP16.15■□□□□ 0.18
ABCD4-221ENST00000554453 PMFBP1Q8TBY8 1022 aa16.14■□□□□ 0.17
ABCD4-221ENST00000554453 COL22A1Q8NFW1 1626 aaPredicted RBP16.14■□□□□ 0.17
ABCD4-221ENST00000554453 ANKARQ7Z5J8 1434 aa16.13■□□□□ 0.17
ABCD4-221ENST00000554453 SBNO1A3KN83 1393 aa16.13■□□□□ 0.17
ABCD4-221ENST00000554453 PRR36Q9H6K5 1346 aa16.11■□□□□ 0.17
ABCD4-221ENST00000554453 KIF1AQ12756 1690 aa16.11■□□□□ 0.17
ABCD4-221ENST00000554453 NBPF1Q3BBV0 1214 aa16.1■□□□□ 0.17
ABCD4-221ENST00000554453 EIF3AQ14152 1382 aaKnown RBP16.1■□□□□ 0.17
ABCD4-221ENST00000554453 BCL9LQ86UU0 1499 aa16.1■□□□□ 0.17
ABCD4-221ENST00000554453 UNC5CLQ8IV45 518 aa16.09■□□□□ 0.17
ABCD4-221ENST00000554453 CABLES1Q8TDN4 633 aa16.09■□□□□ 0.17
ABCD4-221ENST00000554453 ATRNO75882 1429 aa16.09■□□□□ 0.17
ABCD4-221ENST00000554453 LMOD2Q6P5Q4 547 aa16.08■□□□□ 0.16
ABCD4-221ENST00000554453 NUDT16Q96DE0 195 aaKnown RBP16.08■□□□□ 0.16
ABCD4-221ENST00000554453 GJD4Q96KN9 370 aaPredicted RBP16.08■□□□□ 0.16
ABCD4-221ENST00000554453 CDK19Q9BWU1 502 aa16.08■□□□□ 0.16
ABCD4-221ENST00000554453 TNS3Q68CZ2 1445 aa16.08■□□□□ 0.16
ABCD4-221ENST00000554453 HAP1P54257 671 aaPredicted RBP16.07■□□□□ 0.16
ABCD4-221ENST00000554453 NGDNQ8NEJ9 315 aaKnown RBP16.07■□□□□ 0.16
ABCD4-221ENST00000554453 L3MBTL2Q969R5 705 aa16.07■□□□□ 0.16
ABCD4-221ENST00000554453 ARHGEF10O15013 1369 aa16.07■□□□□ 0.16
ABCD4-221ENST00000554453 GPRASP1Q5JY77 1395 aa16.07■□□□□ 0.16
ABCD4-221ENST00000554453 ADGRB2O60241 1585 aa16.07■□□□□ 0.16
ABCD4-221ENST00000554453 RGS12O14924 1447 aa16.06■□□□□ 0.16
ABCD4-221ENST00000554453 SIN3AQ96ST3 1273 aa16.06■□□□□ 0.16
ABCD4-221ENST00000554453 USP32Q8NFA0 1604 aa16.05■□□□□ 0.16
ABCD4-221ENST00000554453 FAM83GA6ND36 823 aa16.05■□□□□ 0.16
ABCD4-221ENST00000554453 CCDC61Q9Y6R9 512 aa16.04■□□□□ 0.16
ABCD4-221ENST00000554453 MARF1Q9Y4F3 1742 aaKnown RBP16.04■□□□□ 0.16
ABCD4-221ENST00000554453 SLIT2O94813 1529 aa16.04■□□□□ 0.16
ABCD4-221ENST00000554453 TULP4Q9NRJ4 1543 aa16.04■□□□□ 0.16
ABCD4-221ENST00000554453 PLEKHG3A1L390 1219 aa16.03■□□□□ 0.16
ABCD4-221ENST00000554453 PLEKHG5O94827 1062 aa16.03■□□□□ 0.16
ABCD4-221ENST00000554453 KIAA1210Q9ULL0 1709 aa16.02■□□□□ 0.16
ABCD4-221ENST00000554453 NEUROD1Q13562 356 aa16.01■□□□□ 0.15
ABCD4-221ENST00000554453 VPS72Q15906 364 aa16.01■□□□□ 0.15
ABCD4-221ENST00000554453 NBPF8Q3BBV2 869 aa16.01■□□□□ 0.15
ABCD4-221ENST00000554453 ARHGEF28Q8N1W1 1705 aaKnown RBP16■□□□□ 0.15
ABCD4-221ENST00000554453 ONECUT3O60422 494 aaPredicted RBP16■□□□□ 0.15
ABCD4-221ENST00000554453 PAK3O75914 559 aaPredicted RBP16■□□□□ 0.15
ABCD4-221ENST00000554453 CENPJQ9HC77 1338 aaPredicted RBP15.99■□□□□ 0.15
ABCD4-221ENST00000554453 ATAD2Q6PL18 1390 aa15.99■□□□□ 0.15
ABCD4-221ENST00000554453 ACEP12821 1306 aa15.98■□□□□ 0.15
ABCD4-221ENST00000554453 CCDC125Q86Z20 511 aa15.97■□□□□ 0.15
ABCD4-221ENST00000554453 POLR3AO14802 1390 aaPredicted RBP15.97■□□□□ 0.15
ABCD4-221ENST00000554453 ATP7BP35670 1465 aa15.97■□□□□ 0.15
ABCD4-221ENST00000554453 TRPM3Q9HCF6 1732 aaPredicted RBP15.97■□□□□ 0.15
ABCD4-221ENST00000554453 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.96■□□□□ 0.15
ABCD4-221ENST00000554453 RALGAPBQ86X10 1494 aa15.96■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms