RNA–Protein interactions for RNA: ENST00000554340.1

NEMP1-204, Transcript of nuclear envelope integral membrane protein 1, humanhuman

TSL 1 (best)

Gene NEMP1, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEMP1-204ENST00000554340 RXRBP28702 533 aa30.47■■■□□ 2.47
NEMP1-204ENST00000554340 CDK12Q9NYV4 1490 aaPredicted RBP30.47■■■□□ 2.47
NEMP1-204ENST00000554340 PIK3C2GO75747 1445 aa30.47■■■□□ 2.47
NEMP1-204ENST00000554340 LRPPRCP42704 1394 aaKnown RBP30.46■■■□□ 2.47
NEMP1-204ENST00000554340 COL22A1Q8NFW1 1626 aaPredicted RBP30.43■■■□□ 2.46
NEMP1-204ENST00000554340 C8orf37Q96NL8 207 aa30.42■■■□□ 2.46
NEMP1-204ENST00000554340 ABCC11Q96J66 1382 aa30.41■■■□□ 2.46
NEMP1-204ENST00000554340 STK26Q9P289 416 aa30.41■■■□□ 2.46
NEMP1-204ENST00000554340 FMN2Q9NZ56 1722 aa30.37■■■□□ 2.45
NEMP1-204ENST00000554340 ESCO1Q5FWF5 840 aa30.37■■■□□ 2.45
NEMP1-204ENST00000554340 TMEM132EQ6IEE7 984 aa30.37■■■□□ 2.45
NEMP1-204ENST00000554340 WAPLQ7Z5K2 1190 aa30.37■■■□□ 2.45
NEMP1-204ENST00000554340 YTHDC2Q9H6S0 1430 aaKnown RBP30.37■■■□□ 2.45
NEMP1-204ENST00000554340 NPHP3Q7Z494 1330 aa30.36■■■□□ 2.45
NEMP1-204ENST00000554340 PXDNQ92626 1479 aa30.36■■■□□ 2.45
NEMP1-204ENST00000554340 ADAMTS2O95450 1211 aa30.36■■■□□ 2.45
NEMP1-204ENST00000554340 NRXN1Q9ULB1 1477 aa30.35■■■□□ 2.45
NEMP1-204ENST00000554340 UPF1Q92900 1129 aaKnown RBP eCLIP30.35■■■□□ 2.45
NEMP1-204ENST00000554340 MYOM2P54296 1465 aa30.35■■■□□ 2.45
NEMP1-204ENST00000554340 PLEKHH1Q9ULM0 1364 aa30.34■■■□□ 2.45
NEMP1-204ENST00000554340 NGLY1Q96IV0 654 aa30.33■■■□□ 2.45
NEMP1-204ENST00000554340 QTRT2Q9H974 415 aaKnown RBP30.33■■■□□ 2.45
NEMP1-204ENST00000554340 RBM6P78332 1123 aaKnown RBP30.32■■■□□ 2.44
NEMP1-204ENST00000554340 RAB3GAP2Q9H2M9 1393 aa30.31■■■□□ 2.44
NEMP1-204ENST00000554340 KIF1AQ12756 1690 aa30.31■■■□□ 2.44
NEMP1-204ENST00000554340 RGS12O14924 1447 aa30.31■■■□□ 2.44
NEMP1-204ENST00000554340 MARF1Q9Y4F3 1742 aaKnown RBP30.31■■■□□ 2.44
NEMP1-204ENST00000554340 C14orf93Q9H972 538 aaKnown RBP30.29■■■□□ 2.44
NEMP1-204ENST00000554340 FOXO3O43524 673 aa30.28■■■□□ 2.44
NEMP1-204ENST00000554340 SIRT1Q96EB6 747 aa30.28■■■□□ 2.44
NEMP1-204ENST00000554340 NUTM2FA1L443 756 aa30.27■■■□□ 2.44
NEMP1-204ENST00000554340 DHX57Q6P158 1386 aaKnown RBP30.24■■■□□ 2.43
NEMP1-204ENST00000554340 RGPD8O14715 1765 aaPredicted RBP30.24■■■□□ 2.43
NEMP1-204ENST00000554340 XPCQ01831 940 aaPredicted RBP30.24■■■□□ 2.43
NEMP1-204ENST00000554340 USP21Q9UK80 565 aa30.24■■■□□ 2.43
NEMP1-204ENST00000554340 CFAP70Q5T0N1 1121 aa30.23■■■□□ 2.43
NEMP1-204ENST00000554340 FNBP4Q8N3X1 1017 aaPredicted RBP30.23■■■□□ 2.43
NEMP1-204ENST00000554340 TRPC5Q9UL62 973 aaPredicted RBP30.2■■■□□ 2.43
NEMP1-204ENST00000554340 DLC1Q96QB1 1528 aa30.19■■■□□ 2.42
NEMP1-204ENST00000554340 ATRNO75882 1429 aa30.18■■■□□ 2.42
NEMP1-204ENST00000554340 ADGRB1O14514 1584 aa30.15■■■□□ 2.42
NEMP1-204ENST00000554340 SPATA31A3Q5VYP0 1347 aa30.14■■■□□ 2.42
NEMP1-204ENST00000554340 PRAM1Q96QH2 718 aa30.14■■■□□ 2.41
NEMP1-204ENST00000554340 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.14■■■□□ 2.41
NEMP1-204ENST00000554340 ADGRB2O60241 1585 aa30.13■■■□□ 2.41
NEMP1-204ENST00000554340 BCL9LQ86UU0 1499 aa30.13■■■□□ 2.41
NEMP1-204ENST00000554340 KRT28Q7Z3Y7 464 aa30.11■■■□□ 2.41
NEMP1-204ENST00000554340 PHF8Q9UPP1 1060 aa30.11■■■□□ 2.41
NEMP1-204ENST00000554340 USP32Q8NFA0 1604 aa30.1■■■□□ 2.41
NEMP1-204ENST00000554340 SAFB2Q14151 953 aaKnown RBP eCLIP30.09■■■□□ 2.41
NEMP1-204ENST00000554340 ATAD2Q6PL18 1390 aa30.09■■■□□ 2.41
NEMP1-204ENST00000554340 TNS3Q68CZ2 1445 aa30.08■■■□□ 2.41
NEMP1-204ENST00000554340 POGKQ9P215 609 aa30.08■■■□□ 2.41
NEMP1-204ENST00000554340 ANKARQ7Z5J8 1434 aa30.08■■■□□ 2.41
NEMP1-204ENST00000554340 ABCA3Q99758 1704 aa30.05■■■□□ 2.4
NEMP1-204ENST00000554340 HRCP23327 699 aa30.05■■■□□ 2.4
NEMP1-204ENST00000554340 PSME1Q06323 249 aa30.04■■■□□ 2.4
NEMP1-204ENST00000554340 SLIT2O94813 1529 aa30.04■■■□□ 2.4
NEMP1-204ENST00000554340 SBNO1A3KN83 1393 aa30.03■■■□□ 2.4
NEMP1-204ENST00000554340 DCAF11Q8TEB1 546 aa30.03■■■□□ 2.4
NEMP1-204ENST00000554340 EP400Q96L91 3159 aa30.02■■■□□ 2.4
NEMP1-204ENST00000554340 STAC3Q96MF2 364 aa30.02■■■□□ 2.4
NEMP1-204ENST00000554340 TRAK1Q9UPV9 953 aa30.01■■■□□ 2.39
NEMP1-204ENST00000554340 KDM2AQ9Y2K7 1162 aa30.01■■■□□ 2.39
NEMP1-204ENST00000554340 GJD4Q96KN9 370 aaPredicted RBP30■■■□□ 2.39
NEMP1-204ENST00000554340 GLI3P10071 1580 aa29.99■■■□□ 2.39
NEMP1-204ENST00000554340 UNC5CLQ8IV45 518 aa29.99■■■□□ 2.39
NEMP1-204ENST00000554340 PLCH1Q4KWH8 1693 aa29.98■■■□□ 2.39
NEMP1-204ENST00000554340 ARHGEF10O15013 1369 aa29.98■■■□□ 2.39
NEMP1-204ENST00000554340 TRPM3Q9HCF6 1732 aaPredicted RBP29.98■■■□□ 2.39
NEMP1-204ENST00000554340 NWD2Q9ULI1 1742 aa29.98■■■□□ 2.39
NEMP1-204ENST00000554340 EIF3AQ14152 1382 aaKnown RBP29.97■■■□□ 2.39
NEMP1-204ENST00000554340 ARHGEF28Q8N1W1 1705 aaKnown RBP29.96■■■□□ 2.39
NEMP1-204ENST00000554340 TULP4Q9NRJ4 1543 aa29.96■■■□□ 2.39
NEMP1-204ENST00000554340 RALGAPBQ86X10 1494 aa29.96■■■□□ 2.39
NEMP1-204ENST00000554340 HAP1P54257 671 aaPredicted RBP29.96■■■□□ 2.39
NEMP1-204ENST00000554340 PMFBP1Q8TBY8 1022 aa29.95■■■□□ 2.39
NEMP1-204ENST00000554340 HIRIP3Q9BW71 556 aaPredicted RBP29.95■■■□□ 2.39
NEMP1-204ENST00000554340 MINK1Q8N4C8 1332 aaPredicted RBP29.95■■■□□ 2.38
NEMP1-204ENST00000554340 CABLES1Q8TDN4 633 aa29.94■■■□□ 2.38
NEMP1-204ENST00000554340 ALS2Q96Q42 1657 aa29.93■■■□□ 2.38
NEMP1-204ENST00000554340 LMOD2Q6P5Q4 547 aa29.92■■■□□ 2.38
NEMP1-204ENST00000554340 PRR36Q9H6K5 1346 aa29.9■■■□□ 2.38
NEMP1-204ENST00000554340 BRWD3Q6RI45 1802 aa29.9■■■□□ 2.38
NEMP1-204ENST00000554340 ITSN1Q15811 1721 aa29.9■■■□□ 2.38
NEMP1-204ENST00000554340 WASLO00401 505 aaPredicted RBP29.9■■■□□ 2.38
NEMP1-204ENST00000554340 GPRASP1Q5JY77 1395 aa29.88■■■□□ 2.37
NEMP1-204ENST00000554340 PLEKHG5O94827 1062 aa29.88■■■□□ 2.37
NEMP1-204ENST00000554340 KIAA1210Q9ULL0 1709 aa29.88■■■□□ 2.37
NEMP1-204ENST00000554340 VPS72Q15906 364 aa29.85■■■□□ 2.37
NEMP1-204ENST00000554340 NRAPQ86VF7 1730 aa29.84■■■□□ 2.37
NEMP1-204ENST00000554340 CRYBG1Q9Y4K1 1723 aa29.84■■■□□ 2.37
NEMP1-204ENST00000554340 CCDC125Q86Z20 511 aa29.84■■■□□ 2.37
NEMP1-204ENST00000554340 ATP7BP35670 1465 aa29.83■■■□□ 2.37
NEMP1-204ENST00000554340 COL14A1Q05707 1796 aaKnown RBP29.81■■■□□ 2.36
NEMP1-204ENST00000554340 FAM83GA6ND36 823 aa29.79■■■□□ 2.36
NEMP1-204ENST00000554340 NGDNQ8NEJ9 315 aaKnown RBP29.79■■■□□ 2.36
NEMP1-204ENST00000554340 TOPAZ1Q8N9V7 1692 aa29.77■■■□□ 2.36
NEMP1-204ENST00000554340 SEPT12Q8IYM1 358 aa29.77■■■□□ 2.36
NEMP1-204ENST00000554340 CCDC9Q9Y3X0 531 aaKnown RBP29.77■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms