RNA–Protein interactions for RNA: ENST00000554338.1

RIPK3-202, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 5

Gene RIPK3, Length 500 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-202ENST00000554338 SOS2Q07890 1332 aaPredicted RBP20.36■□□□□ 0.85
RIPK3-202ENST00000554338 STK26Q9P289 416 aa20.36■□□□□ 0.85
RIPK3-202ENST00000554338 NRXN1Q9ULB1 1477 aa20.36■□□□□ 0.85
RIPK3-202ENST00000554338 PLEKHH1Q9ULM0 1364 aa20.35■□□□□ 0.85
RIPK3-202ENST00000554338 TMEM132EQ6IEE7 984 aa20.35■□□□□ 0.85
RIPK3-202ENST00000554338 ABCC11Q96J66 1382 aa20.34■□□□□ 0.85
RIPK3-202ENST00000554338 AFF2P51816 1311 aa20.34■□□□□ 0.85
RIPK3-202ENST00000554338 ACIN1Q9UKV3 1341 aaKnown RBP20.34■□□□□ 0.85
RIPK3-202ENST00000554338 MYOM2P54296 1465 aa20.34■□□□□ 0.85
RIPK3-202ENST00000554338 YTHDC2Q9H6S0 1430 aaKnown RBP20.34■□□□□ 0.85
RIPK3-202ENST00000554338 WAPLQ7Z5K2 1190 aa20.33■□□□□ 0.85
RIPK3-202ENST00000554338 C8orf37Q96NL8 207 aa20.31■□□□□ 0.84
RIPK3-202ENST00000554338 PXDNQ92626 1479 aa20.3■□□□□ 0.84
RIPK3-202ENST00000554338 COL22A1Q8NFW1 1626 aaPredicted RBP20.29■□□□□ 0.84
RIPK3-202ENST00000554338 FMN2Q9NZ56 1722 aa20.29■□□□□ 0.84
RIPK3-202ENST00000554338 ESCO1Q5FWF5 840 aa20.28■□□□□ 0.84
RIPK3-202ENST00000554338 C14orf93Q9H972 538 aaKnown RBP20.28■□□□□ 0.84
RIPK3-202ENST00000554338 CDK12Q9NYV4 1490 aaPredicted RBP20.28■□□□□ 0.84
RIPK3-202ENST00000554338 NPHP3Q7Z494 1330 aa20.27■□□□□ 0.84
RIPK3-202ENST00000554338 NUTM2FA1L443 756 aa20.27■□□□□ 0.84
RIPK3-202ENST00000554338 ADAMTS2O95450 1211 aa20.27■□□□□ 0.84
RIPK3-202ENST00000554338 RXRBP28702 533 aa20.27■□□□□ 0.84
RIPK3-202ENST00000554338 CFAP70Q5T0N1 1121 aa20.26■□□□□ 0.83
RIPK3-202ENST00000554338 XPCQ01831 940 aaPredicted RBP20.24■□□□□ 0.83
RIPK3-202ENST00000554338 RGS12O14924 1447 aa20.24■□□□□ 0.83
RIPK3-202ENST00000554338 FOXO3O43524 673 aa20.23■□□□□ 0.83
RIPK3-202ENST00000554338 ADGRB1O14514 1584 aa20.22■□□□□ 0.83
RIPK3-202ENST00000554338 SIRT1Q96EB6 747 aa20.22■□□□□ 0.83
RIPK3-202ENST00000554338 KIF1AQ12756 1690 aa20.22■□□□□ 0.83
RIPK3-202ENST00000554338 DHX57Q6P158 1386 aaKnown RBP20.21■□□□□ 0.83
RIPK3-202ENST00000554338 NGLY1Q96IV0 654 aa20.21■□□□□ 0.83
RIPK3-202ENST00000554338 DLC1Q96QB1 1528 aa20.21■□□□□ 0.83
RIPK3-202ENST00000554338 UPF1Q92900 1129 aaKnown RBP eCLIP20.2■□□□□ 0.82
RIPK3-202ENST00000554338 QTRT2Q9H974 415 aaKnown RBP20.2■□□□□ 0.82
RIPK3-202ENST00000554338 RBM6P78332 1123 aaKnown RBP20.19■□□□□ 0.82
RIPK3-202ENST00000554338 PRAM1Q96QH2 718 aa20.18■□□□□ 0.82
RIPK3-202ENST00000554338 SAFB2Q14151 953 aaKnown RBP eCLIP20.17■□□□□ 0.82
RIPK3-202ENST00000554338 ADGRB2O60241 1585 aa20.17■□□□□ 0.82
RIPK3-202ENST00000554338 RGPD8O14715 1765 aaPredicted RBP20.16■□□□□ 0.82
RIPK3-202ENST00000554338 FNBP4Q8N3X1 1017 aaPredicted RBP20.16■□□□□ 0.82
RIPK3-202ENST00000554338 USP21Q9UK80 565 aa20.16■□□□□ 0.82
RIPK3-202ENST00000554338 MARF1Q9Y4F3 1742 aaKnown RBP20.16■□□□□ 0.82
RIPK3-202ENST00000554338 ATRNO75882 1429 aa20.15■□□□□ 0.82
RIPK3-202ENST00000554338 USP32Q8NFA0 1604 aa20.15■□□□□ 0.82
RIPK3-202ENST00000554338 SPATA31A3Q5VYP0 1347 aa20.14■□□□□ 0.81
RIPK3-202ENST00000554338 HRCP23327 699 aa20.14■□□□□ 0.81
RIPK3-202ENST00000554338 PHF8Q9UPP1 1060 aa20.13■□□□□ 0.81
RIPK3-202ENST00000554338 BCL9LQ86UU0 1499 aa20.12■□□□□ 0.81
RIPK3-202ENST00000554338 TNS3Q68CZ2 1445 aa20.12■□□□□ 0.81
RIPK3-202ENST00000554338 DCAF11Q8TEB1 546 aa20.12■□□□□ 0.81
RIPK3-202ENST00000554338 TRPC5Q9UL62 973 aaPredicted RBP20.12■□□□□ 0.81
RIPK3-202ENST00000554338 KDM2AQ9Y2K7 1162 aa20.12■□□□□ 0.81
RIPK3-202ENST00000554338 ANKARQ7Z5J8 1434 aa20.11■□□□□ 0.81
RIPK3-202ENST00000554338 KRT28Q7Z3Y7 464 aa20.11■□□□□ 0.81
RIPK3-202ENST00000554338 POGKQ9P215 609 aa20.11■□□□□ 0.81
RIPK3-202ENST00000554338 TRAK1Q9UPV9 953 aa20.11■□□□□ 0.81
RIPK3-202ENST00000554338 HIRIP3Q9BW71 556 aaPredicted RBP20.08■□□□□ 0.81
RIPK3-202ENST00000554338 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.07■□□□□ 0.8
RIPK3-202ENST00000554338 ABCA3Q99758 1704 aa20.07■□□□□ 0.8
RIPK3-202ENST00000554338 SBNO1A3KN83 1393 aa20.07■□□□□ 0.8
RIPK3-202ENST00000554338 SLIT2O94813 1529 aa20.07■□□□□ 0.8
RIPK3-202ENST00000554338 MINK1Q8N4C8 1332 aaPredicted RBP20.06■□□□□ 0.8
RIPK3-202ENST00000554338 EP400Q96L91 3159 aa20.06■□□□□ 0.8
RIPK3-202ENST00000554338 ARHGEF28Q8N1W1 1705 aaKnown RBP20.06■□□□□ 0.8
RIPK3-202ENST00000554338 TULP4Q9NRJ4 1543 aa20.06■□□□□ 0.8
RIPK3-202ENST00000554338 PRR36Q9H6K5 1346 aa20.05■□□□□ 0.8
RIPK3-202ENST00000554338 PMFBP1Q8TBY8 1022 aa20.04■□□□□ 0.8
RIPK3-202ENST00000554338 STAC3Q96MF2 364 aa20.04■□□□□ 0.8
RIPK3-202ENST00000554338 TRPM3Q9HCF6 1732 aaPredicted RBP20.04■□□□□ 0.8
RIPK3-202ENST00000554338 PSME1Q06323 249 aa20.03■□□□□ 0.8
RIPK3-202ENST00000554338 ATAD2Q6PL18 1390 aa20.03■□□□□ 0.8
RIPK3-202ENST00000554338 GLI3P10071 1580 aa20.03■□□□□ 0.8
RIPK3-202ENST00000554338 CABLES1Q8TDN4 633 aa20.02■□□□□ 0.8
RIPK3-202ENST00000554338 ARHGEF10O15013 1369 aa20.02■□□□□ 0.8
RIPK3-202ENST00000554338 EIF3AQ14152 1382 aaKnown RBP20.02■□□□□ 0.8
RIPK3-202ENST00000554338 RALGAPBQ86X10 1494 aa20.01■□□□□ 0.79
RIPK3-202ENST00000554338 PLCH1Q4KWH8 1693 aa20■□□□□ 0.79
RIPK3-202ENST00000554338 WASLO00401 505 aaPredicted RBP20■□□□□ 0.79
RIPK3-202ENST00000554338 PLEKHG5O94827 1062 aa20■□□□□ 0.79
RIPK3-202ENST00000554338 UNC5CLQ8IV45 518 aa20■□□□□ 0.79
RIPK3-202ENST00000554338 GJD4Q96KN9 370 aaPredicted RBP20■□□□□ 0.79
RIPK3-202ENST00000554338 ALS2Q96Q42 1657 aa20■□□□□ 0.79
RIPK3-202ENST00000554338 ATP7BP35670 1465 aa19.99■□□□□ 0.79
RIPK3-202ENST00000554338 LMOD2Q6P5Q4 547 aa19.99■□□□□ 0.79
RIPK3-202ENST00000554338 HAP1P54257 671 aaPredicted RBP19.98■□□□□ 0.79
RIPK3-202ENST00000554338 KIAA1210Q9ULL0 1709 aa19.98■□□□□ 0.79
RIPK3-202ENST00000554338 NWD2Q9ULI1 1742 aa19.96■□□□□ 0.79
RIPK3-202ENST00000554338 GPRASP1Q5JY77 1395 aa19.95■□□□□ 0.79
RIPK3-202ENST00000554338 ITSN1Q15811 1721 aa19.95■□□□□ 0.78
RIPK3-202ENST00000554338 NRAPQ86VF7 1730 aa19.93■□□□□ 0.78
RIPK3-202ENST00000554338 CRYBG1Q9Y4K1 1723 aa19.93■□□□□ 0.78
RIPK3-202ENST00000554338 TOPAZ1Q8N9V7 1692 aa19.92■□□□□ 0.78
RIPK3-202ENST00000554338 VPS72Q15906 364 aa19.91■□□□□ 0.78
RIPK3-202ENST00000554338 NBPF1Q3BBV0 1214 aa19.91■□□□□ 0.78
RIPK3-202ENST00000554338 NGDNQ8NEJ9 315 aaKnown RBP19.91■□□□□ 0.78
RIPK3-202ENST00000554338 NUDT16Q96DE0 195 aaKnown RBP19.91■□□□□ 0.78
RIPK3-202ENST00000554338 FAM83GA6ND36 823 aa19.9■□□□□ 0.78
RIPK3-202ENST00000554338 BRWD3Q6RI45 1802 aa19.9■□□□□ 0.78
RIPK3-202ENST00000554338 COL14A1Q05707 1796 aaKnown RBP19.88■□□□□ 0.77
RIPK3-202ENST00000554338 CDK19Q9BWU1 502 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms