RNA–Protein interactions for RNA: ENST00000554336.5

TUBB3-205, Transcript of tubulin beta 3 class III, humanhuman

TSL 3 BASIC

Gene TUBB3, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-205ENST00000554336 LRP6O75581 1613 aa24.72■■□□□ 1.55
TUBB3-205ENST00000554336 TMEM132EQ6IEE7 984 aa24.71■■□□□ 1.55
TUBB3-205ENST00000554336 SHPRHQ149N8 1683 aa24.71■■□□□ 1.55
TUBB3-205ENST00000554336 DCCP43146 1447 aa24.69■■□□□ 1.54
TUBB3-205ENST00000554336 NALCNQ8IZF0 1738 aa24.69■■□□□ 1.54
TUBB3-205ENST00000554336 NBPF1Q3BBV0 1214 aa24.69■■□□□ 1.54
TUBB3-205ENST00000554336 BRINP3Q76B58 766 aa24.69■■□□□ 1.54
TUBB3-205ENST00000554336 YTHDC2Q9H6S0 1430 aaKnown RBP24.68■■□□□ 1.54
TUBB3-205ENST00000554336 ARHGEF28Q8N1W1 1705 aaKnown RBP24.67■■□□□ 1.54
TUBB3-205ENST00000554336 TECPR2O15040 1411 aa24.67■■□□□ 1.54
TUBB3-205ENST00000554336 MST1RQ04912 1400 aa24.67■■□□□ 1.54
TUBB3-205ENST00000554336 LRPPRCP42704 1394 aaKnown RBP24.66■■□□□ 1.54
TUBB3-205ENST00000554336 GPRASP1Q5JY77 1395 aa24.65■■□□□ 1.54
TUBB3-205ENST00000554336 NHSL1Q5SYE7 1610 aa24.64■■□□□ 1.54
TUBB3-205ENST00000554336 SPATA31A6Q5VVP1 1343 aa24.64■■□□□ 1.54
TUBB3-205ENST00000554336 PTCH1Q13635 1447 aa24.63■■□□□ 1.53
TUBB3-205ENST00000554336 ADGRL3Q9HAR2 1447 aa24.63■■□□□ 1.53
TUBB3-205ENST00000554336 ROBO2Q9HCK4 1378 aa24.62■■□□□ 1.53
TUBB3-205ENST00000554336 DLC1Q96QB1 1528 aa24.61■■□□□ 1.53
TUBB3-205ENST00000554336 ROCK2O75116 1388 aaKnown RBP24.61■■□□□ 1.53
TUBB3-205ENST00000554336 ABCC11Q96J66 1382 aa24.61■■□□□ 1.53
TUBB3-205ENST00000554336 MEX3CQ5U5Q3 659 aaKnown RBP24.59■■□□□ 1.53
TUBB3-205ENST00000554336 STK26Q9P289 416 aa24.59■■□□□ 1.53
TUBB3-205ENST00000554336 DDX17Q92841 729 aaKnown RBP24.57■■□□□ 1.52
TUBB3-205ENST00000554336 PLEKHH1Q9ULM0 1364 aa24.56■■□□□ 1.52
TUBB3-205ENST00000554336 NUTM2BA6NNL0 878 aaPredicted RBP24.54■■□□□ 1.52
TUBB3-205ENST00000554336 NUTM2EB1AL46 878 aaPredicted RBP24.54■■□□□ 1.52
TUBB3-205ENST00000554336 NUTM2AQ8IVF1 878 aaPredicted RBP24.54■■□□□ 1.52
TUBB3-205ENST00000554336 TRAK1Q9UPV9 953 aa24.54■■□□□ 1.52
TUBB3-205ENST00000554336 QRICH2Q9H0J4 1663 aa24.52■■□□□ 1.52
TUBB3-205ENST00000554336 C1orf167Q5SNV9 1468 aa24.51■■□□□ 1.51
TUBB3-205ENST00000554336 ZNF772Q68DY9 489 aaPredicted RBP24.5■■□□□ 1.51
TUBB3-205ENST00000554336 CARD11Q9BXL7 1154 aa24.5■■□□□ 1.51
TUBB3-205ENST00000554336 WAPLQ7Z5K2 1190 aa24.49■■□□□ 1.51
TUBB3-205ENST00000554336 PNPLA6Q8IY17 1366 aa24.47■■□□□ 1.51
TUBB3-205ENST00000554336 LRRC59Q96AG4 307 aaKnown RBP24.47■■□□□ 1.51
TUBB3-205ENST00000554336 PRAM1Q96QH2 718 aa24.47■■□□□ 1.51
TUBB3-205ENST00000554336 ADGRB2O60241 1585 aa24.46■■□□□ 1.51
TUBB3-205ENST00000554336 SIRT1Q96EB6 747 aa24.46■■□□□ 1.51
TUBB3-205ENST00000554336 ORAI2Q96SN7 254 aa24.45■■□□□ 1.5
TUBB3-205ENST00000554336 CDC42BPGQ6DT37 1551 aa24.44■■□□□ 1.5
TUBB3-205ENST00000554336 USP47Q96K76 1375 aa24.43■■□□□ 1.5
TUBB3-205ENST00000554336 AFF2P51816 1311 aa24.43■■□□□ 1.5
TUBB3-205ENST00000554336 SAFB2Q14151 953 aaKnown RBP eCLIP24.42■■□□□ 1.5
TUBB3-205ENST00000554336 FMN2Q9NZ56 1722 aa24.4■■□□□ 1.5
TUBB3-205ENST00000554336 EIF3AQ14152 1382 aaKnown RBP24.4■■□□□ 1.5
TUBB3-205ENST00000554336 CENPJQ9HC77 1338 aaPredicted RBP24.39■■□□□ 1.5
TUBB3-205ENST00000554336 RXRBP28702 533 aa24.39■■□□□ 1.49
TUBB3-205ENST00000554336 C8orf37Q96NL8 207 aa24.39■■□□□ 1.49
TUBB3-205ENST00000554336 TULP4Q9NRJ4 1543 aa24.39■■□□□ 1.49
TUBB3-205ENST00000554336 POGKQ9P215 609 aa24.38■■□□□ 1.49
TUBB3-205ENST00000554336 SOS2Q07890 1332 aaPredicted RBP24.37■■□□□ 1.49
TUBB3-205ENST00000554336 MINK1Q8N4C8 1332 aaPredicted RBP24.36■■□□□ 1.49
TUBB3-205ENST00000554336 USP32Q8NFA0 1604 aa24.35■■□□□ 1.49
TUBB3-205ENST00000554336 CDK12Q9NYV4 1490 aaPredicted RBP24.34■■□□□ 1.49
TUBB3-205ENST00000554336 SBNO2Q9Y2G9 1366 aa24.34■■□□□ 1.49
TUBB3-205ENST00000554336 ADAMTS2O95450 1211 aa24.34■■□□□ 1.49
TUBB3-205ENST00000554336 ZEB1P37275 1124 aaPredicted RBP24.34■■□□□ 1.49
TUBB3-205ENST00000554336 HIRIP3Q9BW71 556 aaPredicted RBP24.34■■□□□ 1.49
TUBB3-205ENST00000554336 ST20-MTHFSA0A0A6YYL1 179 aa24.33■■□□□ 1.49
TUBB3-205ENST00000554336 UPF1Q92900 1129 aaKnown RBP eCLIP24.33■■□□□ 1.49
TUBB3-205ENST00000554336 COL22A1Q8NFW1 1626 aaPredicted RBP24.32■■□□□ 1.48
TUBB3-205ENST00000554336 RGPD8O14715 1765 aaPredicted RBP24.32■■□□□ 1.48
TUBB3-205ENST00000554336 TESK2Q96S53 571 aa24.32■■□□□ 1.48
TUBB3-205ENST00000554336 RGS12O14924 1447 aa24.3■■□□□ 1.48
TUBB3-205ENST00000554336 NUTM2FA1L443 756 aa24.3■■□□□ 1.48
TUBB3-205ENST00000554336 ESCO1Q5FWF5 840 aa24.3■■□□□ 1.48
TUBB3-205ENST00000554336 QTRT2Q9H974 415 aaKnown RBP24.3■■□□□ 1.48
TUBB3-205ENST00000554336 HSPA5P11021 654 aaKnown RBP24.29■■□□□ 1.48
TUBB3-205ENST00000554336 NGLY1Q96IV0 654 aa24.29■■□□□ 1.48
TUBB3-205ENST00000554336 PXDNQ92626 1479 aa24.29■■□□□ 1.48
TUBB3-205ENST00000554336 TOPAZ1Q8N9V7 1692 aa24.28■■□□□ 1.48
TUBB3-205ENST00000554336 EIF4G2P78344 907 aaKnown RBP eCLIP24.27■■□□□ 1.48
TUBB3-205ENST00000554336 ATP7BP35670 1465 aa24.26■■□□□ 1.47
TUBB3-205ENST00000554336 XPCQ01831 940 aaPredicted RBP24.26■■□□□ 1.47
TUBB3-205ENST00000554336 NPHP3Q7Z494 1330 aa24.26■■□□□ 1.47
TUBB3-205ENST00000554336 FOXO3O43524 673 aa24.25■■□□□ 1.47
TUBB3-205ENST00000554336 RBM6P78332 1123 aaKnown RBP24.25■■□□□ 1.47
TUBB3-205ENST00000554336 MARF1Q9Y4F3 1742 aaKnown RBP24.24■■□□□ 1.47
TUBB3-205ENST00000554336 WASLO00401 505 aaPredicted RBP24.24■■□□□ 1.47
TUBB3-205ENST00000554336 PRR36Q9H6K5 1346 aa24.24■■□□□ 1.47
TUBB3-205ENST00000554336 ITSN1Q15811 1721 aa24.22■■□□□ 1.47
TUBB3-205ENST00000554336 ANKARQ7Z5J8 1434 aa24.21■■□□□ 1.47
TUBB3-205ENST00000554336 CDK19Q9BWU1 502 aa24.21■■□□□ 1.47
TUBB3-205ENST00000554336 USP21Q9UK80 565 aa24.21■■□□□ 1.47
TUBB3-205ENST00000554336 KIF1AQ12756 1690 aa24.2■■□□□ 1.46
TUBB3-205ENST00000554336 EVC2Q86UK5 1308 aa24.18■■□□□ 1.46
TUBB3-205ENST00000554336 FNBP4Q8N3X1 1017 aaPredicted RBP24.18■■□□□ 1.46
TUBB3-205ENST00000554336 CABP2Q9NPB3 220 aa24.18■■□□□ 1.46
TUBB3-205ENST00000554336 MYOM1P52179 1685 aa24.18■■□□□ 1.46
TUBB3-205ENST00000554336 ATRNO75882 1429 aa24.16■■□□□ 1.46
TUBB3-205ENST00000554336 TRPC5Q9UL62 973 aaPredicted RBP24.15■■□□□ 1.46
TUBB3-205ENST00000554336 SRPK2P78362 688 aaKnown RBP24.14■■□□□ 1.45
TUBB3-205ENST00000554336 BCL9LQ86UU0 1499 aa24.13■■□□□ 1.45
TUBB3-205ENST00000554336 C11orf95C9JLR9 678 aaPredicted RBP24.13■■□□□ 1.45
TUBB3-205ENST00000554336 NUDT16Q96DE0 195 aaKnown RBP24.13■■□□□ 1.45
TUBB3-205ENST00000554336 TMF1P82094 1093 aa24.11■■□□□ 1.45
TUBB3-205ENST00000554336 SPATA31A3Q5VYP0 1347 aa24.1■■□□□ 1.45
TUBB3-205ENST00000554336 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.1■■□□□ 1.45
TUBB3-205ENST00000554336 PPIP5K1Q6PFW1 1433 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms