RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 SPATA31D1Q6ZQQ2 1576 aa19.48■□□□□ 0.71
PPP4R3A-201ENST00000554308 MYO3AQ8NEV4 1616 aa19.48■□□□□ 0.71
PPP4R3A-201ENST00000554308 SRPK2P78362 688 aaKnown RBP19.48■□□□□ 0.71
PPP4R3A-201ENST00000554308 CCDC136Q96JN2 1154 aa19.48■□□□□ 0.71
PPP4R3A-201ENST00000554308 QRICH2Q9H0J4 1663 aa19.47■□□□□ 0.71
PPP4R3A-201ENST00000554308 RIMS2Q9UQ26 1411 aa19.47■□□□□ 0.71
PPP4R3A-201ENST00000554308 TNNT2P45379 298 aaPredicted RBP19.46■□□□□ 0.71
PPP4R3A-201ENST00000554308 ADAMTS8Q9UP79 889 aa19.46■□□□□ 0.71
PPP4R3A-201ENST00000554308 YTHDC2Q9H6S0 1430 aaKnown RBP19.45■□□□□ 0.7
PPP4R3A-201ENST00000554308 RNF123Q5XPI4 1314 aa19.45■□□□□ 0.7
PPP4R3A-201ENST00000554308 TNRQ92752 1358 aa19.44■□□□□ 0.7
PPP4R3A-201ENST00000554308 WAPLQ7Z5K2 1190 aa19.44■□□□□ 0.7
PPP4R3A-201ENST00000554308 NSD3Q9BZ95 1437 aa19.42■□□□□ 0.7
PPP4R3A-201ENST00000554308 ALKQ9UM73 1620 aa19.42■□□□□ 0.7
PPP4R3A-201ENST00000554308 WDR43Q15061 677 aaKnown RBP eCLIP19.42■□□□□ 0.7
PPP4R3A-201ENST00000554308 NPC1L1Q9UHC9 1359 aa19.41■□□□□ 0.7
PPP4R3A-201ENST00000554308 ARHGEF28Q8N1W1 1705 aaKnown RBP19.41■□□□□ 0.7
PPP4R3A-201ENST00000554308 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.4■□□□□ 0.7
PPP4R3A-201ENST00000554308 MORC1Q86VD1 984 aa19.4■□□□□ 0.7
PPP4R3A-201ENST00000554308 TULP4Q9NRJ4 1543 aa19.39■□□□□ 0.7
PPP4R3A-201ENST00000554308 PTPRMP28827 1452 aa19.38■□□□□ 0.69
PPP4R3A-201ENST00000554308 HDGFP51858 240 aaKnown RBP19.38■□□□□ 0.69
PPP4R3A-201ENST00000554308 TXNDC2Q86VQ3 553 aa19.37■□□□□ 0.69
PPP4R3A-201ENST00000554308 CDK19Q9BWU1 502 aa19.37■□□□□ 0.69
PPP4R3A-201ENST00000554308 METP08581 1390 aa19.36■□□□□ 0.69
PPP4R3A-201ENST00000554308 PUS7Q96PZ0 661 aaKnown RBP19.35■□□□□ 0.69
PPP4R3A-201ENST00000554308 CGNL1Q0VF96 1302 aa19.35■□□□□ 0.69
PPP4R3A-201ENST00000554308 CDCA7LQ96GN5 454 aa19.35■□□□□ 0.69
PPP4R3A-201ENST00000554308 IPO9Q96P70 1041 aaKnown RBP19.35■□□□□ 0.69
PPP4R3A-201ENST00000554308 ANP32AP39687 249 aaKnown RBP19.34■□□□□ 0.69
PPP4R3A-201ENST00000554308 PLEKHH1Q9ULM0 1364 aa19.34■□□□□ 0.69
PPP4R3A-201ENST00000554308 CCDC146Q8IYE0 955 aa19.33■□□□□ 0.69
PPP4R3A-201ENST00000554308 LTKP29376 864 aa19.33■□□□□ 0.68
PPP4R3A-201ENST00000554308 TMEM2Q9UHN6 1383 aa19.33■□□□□ 0.68
PPP4R3A-201ENST00000554308 CABP1Q9NZU7 370 aa19.32■□□□□ 0.68
PPP4R3A-201ENST00000554308 ANKRD36BQ8N2N9 1353 aa19.32■□□□□ 0.68
PPP4R3A-201ENST00000554308 A0A1W2PP64 1363 aa19.31■□□□□ 0.68
PPP4R3A-201ENST00000554308 EXOC6Q8TAG9 804 aa19.29■□□□□ 0.68
PPP4R3A-201ENST00000554308 SLC26A8Q96RN1 970 aa19.29■□□□□ 0.68
PPP4R3A-201ENST00000554308 GGNBP2Q9H3C7 697 aa19.29■□□□□ 0.68
PPP4R3A-201ENST00000554308 TERF2IPQ9NYB0 399 aa19.29■□□□□ 0.68
PPP4R3A-201ENST00000554308 BLMP54132 1417 aaPredicted RBP19.29■□□□□ 0.68
PPP4R3A-201ENST00000554308 ATAD2Q6PL18 1390 aa19.29■□□□□ 0.68
PPP4R3A-201ENST00000554308 ABCC11Q96J66 1382 aa19.29■□□□□ 0.68
PPP4R3A-201ENST00000554308 MTHFSP49914 203 aa19.28■□□□□ 0.68
PPP4R3A-201ENST00000554308 ZBTB47Q9UFB7 747 aaPredicted RBP19.28■□□□□ 0.68
PPP4R3A-201ENST00000554308 NPM2Q86SE8 214 aaKnown RBP19.28■□□□□ 0.68
PPP4R3A-201ENST00000554308 EID1Q9Y6B2 187 aa19.26■□□□□ 0.67
PPP4R3A-201ENST00000554308 RRP1P56182 461 aaKnown RBP19.26■□□□□ 0.67
PPP4R3A-201ENST00000554308 PDE3BQ13370 1112 aa19.26■□□□□ 0.67
PPP4R3A-201ENST00000554308 HDGFL2Q7Z4V5 671 aaPredicted RBP19.25■□□□□ 0.67
PPP4R3A-201ENST00000554308 APAF1O14727 1248 aa19.25■□□□□ 0.67
PPP4R3A-201ENST00000554308 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.24■□□□□ 0.672e-6■■■□□ 14.9
PPP4R3A-201ENST00000554308 NRXN3Q9Y4C0 1643 aa19.24■□□□□ 0.67
PPP4R3A-201ENST00000554308 INSRP06213 1382 aa19.23■□□□□ 0.67
PPP4R3A-201ENST00000554308 FYB1O15117 783 aa19.23■□□□□ 0.67
PPP4R3A-201ENST00000554308 UBR1Q8IWV7 1749 aa19.23■□□□□ 0.67
PPP4R3A-201ENST00000554308 NCKAP5LQ9HCH0 1330 aa19.23■□□□□ 0.67
PPP4R3A-201ENST00000554308 NINLQ9Y2I6 1382 aa19.23■□□□□ 0.67
PPP4R3A-201ENST00000554308 WASLO00401 505 aaPredicted RBP19.23■□□□□ 0.67
PPP4R3A-201ENST00000554308 RCAN3Q9UKA8 241 aa19.22■□□□□ 0.67
PPP4R3A-201ENST00000554308 NLRP1Q9C000 1473 aa19.22■□□□□ 0.67
PPP4R3A-201ENST00000554308 NUTM2FA1L443 756 aa19.21■□□□□ 0.67
PPP4R3A-201ENST00000554308 POLR3AO14802 1390 aaPredicted RBP19.21■□□□□ 0.67
PPP4R3A-201ENST00000554308 THEMISQ8N1K5 641 aaPredicted RBP19.2■□□□□ 0.66
PPP4R3A-201ENST00000554308 SETD1AO15047 1707 aaKnown RBP19.2■□□□□ 0.66
PPP4R3A-201ENST00000554308 RTL5Q5HYW3 569 aaPredicted RBP19.2■□□□□ 0.66
PPP4R3A-201ENST00000554308 C3P01024 1663 aa19.2■□□□□ 0.66
PPP4R3A-201ENST00000554308 CD163L1Q9NR16 1453 aa19.19■□□□□ 0.66
PPP4R3A-201ENST00000554308 DLC1Q96QB1 1528 aa19.19■□□□□ 0.66
PPP4R3A-201ENST00000554308 NEUROD2Q15784 382 aa19.19■□□□□ 0.66
PPP4R3A-201ENST00000554308 SKAP1Q86WV1 359 aa19.19■□□□□ 0.66
PPP4R3A-201ENST00000554308 CFAP53Q96M91 514 aa19.19■□□□□ 0.66
PPP4R3A-201ENST00000554308 ADAMTS13Q76LX8 1427 aa19.19■□□□□ 0.66
PPP4R3A-201ENST00000554308 ROBO2Q9HCK4 1378 aa19.18■□□□□ 0.66
PPP4R3A-201ENST00000554308 NUDT16Q96DE0 195 aaKnown RBP19.18■□□□□ 0.66
PPP4R3A-201ENST00000554308 DNAJC5Q9H3Z4 198 aa19.18■□□□□ 0.66
PPP4R3A-201ENST00000554308 NSD2O96028 1365 aa19.17■□□□□ 0.66
PPP4R3A-201ENST00000554308 PLEKHG1Q9ULL1 1385 aa19.17■□□□□ 0.66
PPP4R3A-201ENST00000554308 FBLN1P23142 703 aa19.17■□□□□ 0.66
PPP4R3A-201ENST00000554308 FER1L4A9Z1Z3 1794 aa19.17■□□□□ 0.66
PPP4R3A-201ENST00000554308 GOLGA2Q08379 1002 aa19.16■□□□□ 0.66
PPP4R3A-201ENST00000554308 LAS1LQ9Y4W2 734 aaKnown RBP19.16■□□□□ 0.66
PPP4R3A-201ENST00000554308 PDE4AP27815 886 aa19.16■□□□□ 0.66
PPP4R3A-201ENST00000554308 AMOTL2Q9Y2J4 779 aa19.15■□□□□ 0.66
PPP4R3A-201ENST00000554308 PPM1GO15355 546 aaPredicted RBP19.15■□□□□ 0.66
PPP4R3A-201ENST00000554308 PLIN1O60240 522 aa19.15■□□□□ 0.66
PPP4R3A-201ENST00000554308 RRP7AQ9Y3A4 280 aaKnown RBP19.15■□□□□ 0.66
PPP4R3A-201ENST00000554308 CCDC61Q9Y6R9 512 aa19.15■□□□□ 0.66
PPP4R3A-201ENST00000554308 U2AF1L5P0DN76 240 aaPredicted RBP19.14■□□□□ 0.65
PPP4R3A-201ENST00000554308 U2AF1Q01081 240 aaKnown RBP eCLIP19.14■□□□□ 0.65
PPP4R3A-201ENST00000554308 SIRT1Q96EB6 747 aa19.14■□□□□ 0.65
PPP4R3A-201ENST00000554308 PPIP5K1Q6PFW1 1433 aa19.14■□□□□ 0.65
PPP4R3A-201ENST00000554308 FAM135BQ49AJ0 1406 aa19.13■□□□□ 0.65
PPP4R3A-201ENST00000554308 USP32Q8NFA0 1604 aa19.13■□□□□ 0.65
PPP4R3A-201ENST00000554308 TCERG1O14776 1098 aaKnown RBP19.13■□□□□ 0.65
PPP4R3A-201ENST00000554308 ZNF521Q96K83 1311 aa19.12■□□□□ 0.65
PPP4R3A-201ENST00000554308 U2SURPO15042 1029 aaKnown RBP19.12■□□□□ 0.65
PPP4R3A-201ENST00000554308 SPINK5Q9NQ38 1064 aaPredicted RBP19.12■□□□□ 0.65
PPP4R3A-201ENST00000554308 DUSP27Q5VZP5 1158 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms