RNA–Protein interactions for RNA: ENST00000554302.1

RCCD1-202, Transcript of RCC1 domain containing 1, humanhuman

TSL 3

Gene RCCD1, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-202ENST00000554302 SOS2Q07890 1332 aaPredicted RBP32.51■■■□□ 2.8
RCCD1-202ENST00000554302 LRPPRCP42704 1394 aaKnown RBP32.51■■■□□ 2.79
RCCD1-202ENST00000554302 ABCC11Q96J66 1382 aa32.49■■■□□ 2.79
RCCD1-202ENST00000554302 KNDC1Q76NI1 1749 aa32.48■■■□□ 2.79
RCCD1-202ENST00000554302 NRXN1Q9ULB1 1477 aa32.45■■■□□ 2.79
RCCD1-202ENST00000554302 AFF2P51816 1311 aa32.45■■■□□ 2.78
RCCD1-202ENST00000554302 RAB3GAP2Q9H2M9 1393 aa32.45■■■□□ 2.78
RCCD1-202ENST00000554302 TMEM132EQ6IEE7 984 aa32.44■■■□□ 2.78
RCCD1-202ENST00000554302 WAPLQ7Z5K2 1190 aa32.43■■■□□ 2.78
RCCD1-202ENST00000554302 STK26Q9P289 416 aa32.43■■■□□ 2.78
RCCD1-202ENST00000554302 YTHDC2Q9H6S0 1430 aaKnown RBP32.41■■■□□ 2.78
RCCD1-202ENST00000554302 MYOM2P54296 1465 aa32.41■■■□□ 2.78
RCCD1-202ENST00000554302 RXRBP28702 533 aa32.4■■■□□ 2.78
RCCD1-202ENST00000554302 C14orf93Q9H972 538 aaKnown RBP32.4■■■□□ 2.78
RCCD1-202ENST00000554302 PLEKHH1Q9ULM0 1364 aa32.4■■■□□ 2.78
RCCD1-202ENST00000554302 CDK12Q9NYV4 1490 aaPredicted RBP32.4■■■□□ 2.78
RCCD1-202ENST00000554302 SIRT1Q96EB6 747 aa32.38■■■□□ 2.77
RCCD1-202ENST00000554302 COL22A1Q8NFW1 1626 aaPredicted RBP32.37■■■□□ 2.77
RCCD1-202ENST00000554302 ESCO1Q5FWF5 840 aa32.37■■■□□ 2.77
RCCD1-202ENST00000554302 C8orf37Q96NL8 207 aa32.37■■■□□ 2.77
RCCD1-202ENST00000554302 NPHP3Q7Z494 1330 aa32.36■■■□□ 2.77
RCCD1-202ENST00000554302 PXDNQ92626 1479 aa32.35■■■□□ 2.77
RCCD1-202ENST00000554302 FMN2Q9NZ56 1722 aa32.32■■■□□ 2.76
RCCD1-202ENST00000554302 CFAP70Q5T0N1 1121 aa32.31■■■□□ 2.76
RCCD1-202ENST00000554302 ADAMTS2O95450 1211 aa32.3■■■□□ 2.76
RCCD1-202ENST00000554302 FOXO3O43524 673 aa32.29■■■□□ 2.76
RCCD1-202ENST00000554302 QTRT2Q9H974 415 aaKnown RBP32.29■■■□□ 2.76
RCCD1-202ENST00000554302 NGLY1Q96IV0 654 aa32.28■■■□□ 2.76
RCCD1-202ENST00000554302 DHX57Q6P158 1386 aaKnown RBP32.28■■■□□ 2.76
RCCD1-202ENST00000554302 UPF1Q92900 1129 aaKnown RBP eCLIP32.27■■■□□ 2.76
RCCD1-202ENST00000554302 NUTM2FA1L443 756 aa32.26■■■□□ 2.75
RCCD1-202ENST00000554302 HRCP23327 699 aa32.26■■■□□ 2.75
RCCD1-202ENST00000554302 RBM6P78332 1123 aaKnown RBP32.26■■■□□ 2.75
RCCD1-202ENST00000554302 FNBP4Q8N3X1 1017 aaPredicted RBP32.24■■■□□ 2.75
RCCD1-202ENST00000554302 KIF1AQ12756 1690 aa32.23■■■□□ 2.75
RCCD1-202ENST00000554302 RGS12O14924 1447 aa32.23■■■□□ 2.75
RCCD1-202ENST00000554302 DLC1Q96QB1 1528 aa32.22■■■□□ 2.75
RCCD1-202ENST00000554302 XPCQ01831 940 aaPredicted RBP32.21■■■□□ 2.75
RCCD1-202ENST00000554302 ADGRB1O14514 1584 aa32.2■■■□□ 2.75
RCCD1-202ENST00000554302 USP21Q9UK80 565 aa32.19■■■□□ 2.74
RCCD1-202ENST00000554302 PRAM1Q96QH2 718 aa32.18■■■□□ 2.74
RCCD1-202ENST00000554302 MARF1Q9Y4F3 1742 aaKnown RBP32.16■■■□□ 2.74
RCCD1-202ENST00000554302 SPATA31A3Q5VYP0 1347 aa32.15■■■□□ 2.74
RCCD1-202ENST00000554302 RGPD8O14715 1765 aaPredicted RBP32.14■■■□□ 2.74
RCCD1-202ENST00000554302 TRPC5Q9UL62 973 aaPredicted RBP32.14■■■□□ 2.74
RCCD1-202ENST00000554302 ATRNO75882 1429 aa32.14■■■□□ 2.74
RCCD1-202ENST00000554302 STAC3Q96MF2 364 aa32.13■■■□□ 2.73
RCCD1-202ENST00000554302 ADGRB2O60241 1585 aa32.12■■■□□ 2.73
RCCD1-202ENST00000554302 BCL9LQ86UU0 1499 aa32.11■■■□□ 2.73
RCCD1-202ENST00000554302 KRT28Q7Z3Y7 464 aa32.11■■■□□ 2.73
RCCD1-202ENST00000554302 PHF8Q9UPP1 1060 aa32.11■■■□□ 2.73
RCCD1-202ENST00000554302 SAFB2Q14151 953 aaKnown RBP eCLIP32.09■■■□□ 2.73
RCCD1-202ENST00000554302 DCAF11Q8TEB1 546 aa32.09■■■□□ 2.73
RCCD1-202ENST00000554302 USP32Q8NFA0 1604 aa32.08■■■□□ 2.73
RCCD1-202ENST00000554302 POGKQ9P215 609 aa32.08■■■□□ 2.73
RCCD1-202ENST00000554302 ANKARQ7Z5J8 1434 aa32.08■■■□□ 2.73
RCCD1-202ENST00000554302 KDM2AQ9Y2K7 1162 aa32.06■■■□□ 2.72
RCCD1-202ENST00000554302 TNS3Q68CZ2 1445 aa32.05■■■□□ 2.72
RCCD1-202ENST00000554302 TRAK1Q9UPV9 953 aa32.04■■■□□ 2.72
RCCD1-202ENST00000554302 PSME1Q06323 249 aa32.03■■■□□ 2.72
RCCD1-202ENST00000554302 SBNO1A3KN83 1393 aa32.03■■■□□ 2.72
RCCD1-202ENST00000554302 TNKS1BP1Q9C0C2 1729 aaKnown RBP32.02■■■□□ 2.72
RCCD1-202ENST00000554302 SLIT2O94813 1529 aa32.01■■■□□ 2.72
RCCD1-202ENST00000554302 ATAD2Q6PL18 1390 aa31.96■■■□□ 2.71
RCCD1-202ENST00000554302 GJD4Q96KN9 370 aaPredicted RBP31.96■■■□□ 2.71
RCCD1-202ENST00000554302 HIRIP3Q9BW71 556 aaPredicted RBP31.96■■■□□ 2.71
RCCD1-202ENST00000554302 TULP4Q9NRJ4 1543 aa31.95■■■□□ 2.71
RCCD1-202ENST00000554302 EIF3AQ14152 1382 aaKnown RBP31.95■■■□□ 2.71
RCCD1-202ENST00000554302 UNC5CLQ8IV45 518 aa31.95■■■□□ 2.71
RCCD1-202ENST00000554302 PMFBP1Q8TBY8 1022 aa31.95■■■□□ 2.71
RCCD1-202ENST00000554302 PRR36Q9H6K5 1346 aa31.95■■■□□ 2.7
RCCD1-202ENST00000554302 ARHGEF10O15013 1369 aa31.94■■■□□ 2.7
RCCD1-202ENST00000554302 MINK1Q8N4C8 1332 aaPredicted RBP31.94■■■□□ 2.7
RCCD1-202ENST00000554302 EP400Q96L91 3159 aa31.94■■■□□ 2.7
RCCD1-202ENST00000554302 ABCA3Q99758 1704 aa31.93■■■□□ 2.7
RCCD1-202ENST00000554302 WASLO00401 505 aaPredicted RBP31.93■■■□□ 2.7
RCCD1-202ENST00000554302 ARHGEF28Q8N1W1 1705 aaKnown RBP31.92■■■□□ 2.7
RCCD1-202ENST00000554302 TRPM3Q9HCF6 1732 aaPredicted RBP31.92■■■□□ 2.7
RCCD1-202ENST00000554302 CABLES1Q8TDN4 633 aa31.91■■■□□ 2.7
RCCD1-202ENST00000554302 GLI3P10071 1580 aa31.9■■■□□ 2.7
RCCD1-202ENST00000554302 RALGAPBQ86X10 1494 aa31.89■■■□□ 2.7
RCCD1-202ENST00000554302 ALS2Q96Q42 1657 aa31.87■■■□□ 2.69
RCCD1-202ENST00000554302 NWD2Q9ULI1 1742 aa31.86■■■□□ 2.69
RCCD1-202ENST00000554302 KIAA1210Q9ULL0 1709 aa31.86■■■□□ 2.69
RCCD1-202ENST00000554302 HAP1P54257 671 aaPredicted RBP31.85■■■□□ 2.69
RCCD1-202ENST00000554302 LMOD2Q6P5Q4 547 aa31.85■■■□□ 2.69
RCCD1-202ENST00000554302 PLCH1Q4KWH8 1693 aa31.85■■■□□ 2.69
RCCD1-202ENST00000554302 GPRASP1Q5JY77 1395 aa31.83■■■□□ 2.69
RCCD1-202ENST00000554302 ATP7BP35670 1465 aa31.83■■■□□ 2.69
RCCD1-202ENST00000554302 VPS72Q15906 364 aa31.81■■■□□ 2.68
RCCD1-202ENST00000554302 ITSN1Q15811 1721 aa31.78■■■□□ 2.68
RCCD1-202ENST00000554302 FAM83GA6ND36 823 aa31.78■■■□□ 2.68
RCCD1-202ENST00000554302 PLEKHG5O94827 1062 aa31.77■■■□□ 2.68
RCCD1-202ENST00000554302 NUDT16Q96DE0 195 aaKnown RBP31.77■■■□□ 2.68
RCCD1-202ENST00000554302 CRYBG1Q9Y4K1 1723 aa31.76■■■□□ 2.67
RCCD1-202ENST00000554302 ONECUT3O60422 494 aaPredicted RBP31.76■■■□□ 2.67
RCCD1-202ENST00000554302 NGDNQ8NEJ9 315 aaKnown RBP31.76■■■□□ 2.67
RCCD1-202ENST00000554302 CCDC125Q86Z20 511 aa31.75■■■□□ 2.67
RCCD1-202ENST00000554302 NRAPQ86VF7 1730 aa31.73■■■□□ 2.67
RCCD1-202ENST00000554302 NBPF1Q3BBV0 1214 aa31.73■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms