RNA–Protein interactions for RNA: ENST00000554226.5

NEDD1-206, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2

Gene NEDD1, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-206ENST00000554226 HFM1A2PYH4 1435 aa21.23■□□□□ 0.99
NEDD1-206ENST00000554226 ORAI2Q96SN7 254 aa21.23■□□□□ 0.99
NEDD1-206ENST00000554226 CCDC125Q86Z20 511 aa21.22■□□□□ 0.99
NEDD1-206ENST00000554226 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.21■□□□□ 0.99
NEDD1-206ENST00000554226 BCL9LQ86UU0 1499 aa21.2■□□□□ 0.98
NEDD1-206ENST00000554226 PPLO60437 1756 aa21.2■□□□□ 0.98
NEDD1-206ENST00000554226 PXDNQ92626 1479 aa21.2■□□□□ 0.98
NEDD1-206ENST00000554226 VGFO15240 615 aaPredicted RBP21.19■□□□□ 0.98
NEDD1-206ENST00000554226 RPGRIP1LQ68CZ1 1315 aa21.17■□□□□ 0.98
NEDD1-206ENST00000554226 NPHP3Q7Z494 1330 aa21.16■□□□□ 0.98
NEDD1-206ENST00000554226 ITGAEP38570 1179 aa21.13■□□□□ 0.97
NEDD1-206ENST00000554226 GJD4Q96KN9 370 aaPredicted RBP21.13■□□□□ 0.97
NEDD1-206ENST00000554226 NAIPQ13075 1403 aa21.12■□□□□ 0.97
NEDD1-206ENST00000554226 TECPR2O15040 1411 aa21.12■□□□□ 0.97
NEDD1-206ENST00000554226 BLMP54132 1417 aaPredicted RBP21.11■□□□□ 0.97
NEDD1-206ENST00000554226 SLIT2O94813 1529 aa21.09■□□□□ 0.97
NEDD1-206ENST00000554226 GLI3P10071 1580 aa21.09■□□□□ 0.97
NEDD1-206ENST00000554226 LRPPRCP42704 1394 aaKnown RBP21.09■□□□□ 0.97
NEDD1-206ENST00000554226 KNDC1Q76NI1 1749 aa21.08■□□□□ 0.97
NEDD1-206ENST00000554226 KIF1AQ12756 1690 aa21.07■□□□□ 0.96
NEDD1-206ENST00000554226 RALGAPBQ86X10 1494 aa21.07■□□□□ 0.96
NEDD1-206ENST00000554226 RRBP1Q9P2E9 1410 aaKnown RBP21.06■□□□□ 0.96
NEDD1-206ENST00000554226 ESCO1Q5FWF5 840 aa21.06■□□□□ 0.96
NEDD1-206ENST00000554226 LRP5O75197 1615 aa21.06■□□□□ 0.96
NEDD1-206ENST00000554226 FMN2Q9NZ56 1722 aa21.06■□□□□ 0.96
NEDD1-206ENST00000554226 USP32Q8NFA0 1604 aa21.05■□□□□ 0.96
NEDD1-206ENST00000554226 BRWD3Q6RI45 1802 aa21.05■□□□□ 0.96
NEDD1-206ENST00000554226 IFT172Q9UG01 1749 aa21.04■□□□□ 0.96
NEDD1-206ENST00000554226 FOXO3O43524 673 aa21.04■□□□□ 0.96
NEDD1-206ENST00000554226 UNC5CLQ8IV45 518 aa21.04■□□□□ 0.96
NEDD1-206ENST00000554226 XPCQ01831 940 aaPredicted RBP21.03■□□□□ 0.96
NEDD1-206ENST00000554226 DEFB132Q7Z7B7 95 aa21.02■□□□□ 0.96
NEDD1-206ENST00000554226 CCDC144AA2RUR9 1427 aa21.02■□□□□ 0.96
NEDD1-206ENST00000554226 NWD2Q9ULI1 1742 aa21.01■□□□□ 0.95
NEDD1-206ENST00000554226 ABCC11Q96J66 1382 aa21.01■□□□□ 0.95
NEDD1-206ENST00000554226 SPATA31A3Q5VYP0 1347 aa21.01■□□□□ 0.95
NEDD1-206ENST00000554226 SPATA31E1Q6ZUB1 1445 aa20.97■□□□□ 0.95
NEDD1-206ENST00000554226 PLCH1Q4KWH8 1693 aa20.97■□□□□ 0.95
NEDD1-206ENST00000554226 SF3B2Q13435 895 aaKnown RBP20.97■□□□□ 0.95
NEDD1-206ENST00000554226 ABCA3Q99758 1704 aa20.97■□□□□ 0.95
NEDD1-206ENST00000554226 ANKRD30BQ9BXX2 1392 aa20.97■□□□□ 0.95
NEDD1-206ENST00000554226 ONECUT3O60422 494 aaPredicted RBP20.96■□□□□ 0.95
NEDD1-206ENST00000554226 SEPT12Q8IYM1 358 aa20.95■□□□□ 0.94
NEDD1-206ENST00000554226 SLC4A1APQ9BWU0 796 aaKnown RBP20.95■□□□□ 0.94
NEDD1-206ENST00000554226 ADGRF5Q8IZF2 1346 aa20.95■□□□□ 0.94
NEDD1-206ENST00000554226 PIK3C2GO75747 1445 aa20.95■□□□□ 0.94
NEDD1-206ENST00000554226 TNS3Q68CZ2 1445 aa20.94■□□□□ 0.94
NEDD1-206ENST00000554226 RGPD8O14715 1765 aaPredicted RBP20.93■□□□□ 0.94
NEDD1-206ENST00000554226 VPS72Q15906 364 aa20.93■□□□□ 0.94
NEDD1-206ENST00000554226 WAPLQ7Z5K2 1190 aa20.93■□□□□ 0.94
NEDD1-206ENST00000554226 SIRT1Q96EB6 747 aa20.93■□□□□ 0.94
NEDD1-206ENST00000554226 PLEKHH1Q9ULM0 1364 aa20.93■□□□□ 0.94
NEDD1-206ENST00000554226 NUTM2FA1L443 756 aa20.92■□□□□ 0.94
NEDD1-206ENST00000554226 YTHDC2Q9H6S0 1430 aaKnown RBP20.91■□□□□ 0.94
NEDD1-206ENST00000554226 NRXN1Q9ULB1 1477 aa20.89■□□□□ 0.94
NEDD1-206ENST00000554226 SBNO1A3KN83 1393 aa20.89■□□□□ 0.93
NEDD1-206ENST00000554226 KRT28Q7Z3Y7 464 aa20.89■□□□□ 0.93
NEDD1-206ENST00000554226 KRT27Q7Z3Y8 459 aa20.89■□□□□ 0.93
NEDD1-206ENST00000554226 NRAPQ86VF7 1730 aa20.88■□□□□ 0.93
NEDD1-206ENST00000554226 HRCP23327 699 aa20.88■□□□□ 0.93
NEDD1-206ENST00000554226 STK26Q9P289 416 aa20.88■□□□□ 0.93
NEDD1-206ENST00000554226 ARHGEF10O15013 1369 aa20.86■□□□□ 0.93
NEDD1-206ENST00000554226 PSDA5PKW4 1024 aaPredicted RBP20.86■□□□□ 0.93
NEDD1-206ENST00000554226 BAG6P46379 1132 aa20.86■□□□□ 0.93
NEDD1-206ENST00000554226 PPARGC1BQ86YN6 1023 aaKnown RBP20.86■□□□□ 0.93
NEDD1-206ENST00000554226 PSME1Q06323 249 aa20.85■□□□□ 0.93
NEDD1-206ENST00000554226 PHF8Q9UPP1 1060 aa20.85■□□□□ 0.93
NEDD1-206ENST00000554226 HAP1P54257 671 aaPredicted RBP20.84■□□□□ 0.93
NEDD1-206ENST00000554226 TMEM132EQ6IEE7 984 aa20.84■□□□□ 0.93
NEDD1-206ENST00000554226 CABLES1Q8TDN4 633 aa20.83■□□□□ 0.93
NEDD1-206ENST00000554226 CCDC9Q9Y3X0 531 aaKnown RBP20.83■□□□□ 0.93
NEDD1-206ENST00000554226 ADGRB2O60241 1585 aa20.83■□□□□ 0.92
NEDD1-206ENST00000554226 RGPD1P0DJD0 1748 aa20.83■□□□□ 0.92
NEDD1-206ENST00000554226 TRPM3Q9HCF6 1732 aaPredicted RBP20.83■□□□□ 0.92
NEDD1-206ENST00000554226 ANKARQ7Z5J8 1434 aa20.82■□□□□ 0.92
NEDD1-206ENST00000554226 DLC1Q96QB1 1528 aa20.81■□□□□ 0.92
NEDD1-206ENST00000554226 ALS2Q96Q42 1657 aa20.8■□□□□ 0.92
NEDD1-206ENST00000554226 COL14A1Q05707 1796 aaKnown RBP20.8■□□□□ 0.92
NEDD1-206ENST00000554226 RGL3Q3MIN7 710 aa20.8■□□□□ 0.92
NEDD1-206ENST00000554226 C14orf93Q9H972 538 aaKnown RBP20.8■□□□□ 0.92
NEDD1-206ENST00000554226 DISP2A7MBM2 1401 aa20.79■□□□□ 0.92
NEDD1-206ENST00000554226 CRYBG1Q9Y4K1 1723 aa20.78■□□□□ 0.92
NEDD1-206ENST00000554226 THSD7AQ9UPZ6 1657 aa20.77■□□□□ 0.92
NEDD1-206ENST00000554226 FAM83GA6ND36 823 aa20.77■□□□□ 0.92
NEDD1-206ENST00000554226 TNS1Q9HBL0 1735 aaKnown RBP20.77■□□□□ 0.92
NEDD1-206ENST00000554226 DHX57Q6P158 1386 aaKnown RBP20.76■□□□□ 0.91
NEDD1-206ENST00000554226 A0A0G2JS52 829 aa20.76■□□□□ 0.91
NEDD1-206ENST00000554226 MYT1Q01538 1121 aa20.76■□□□□ 0.91
NEDD1-206ENST00000554226 EN1Q05925 392 aaPredicted RBP20.76■□□□□ 0.91
NEDD1-206ENST00000554226 FAM98CQ17RN3 349 aaKnown RBP20.76■□□□□ 0.91
NEDD1-206ENST00000554226 PLEKHG5O94827 1062 aa20.74■□□□□ 0.91
NEDD1-206ENST00000554226 R3HDM1Q15032 1099 aaKnown RBP20.74■□□□□ 0.91
NEDD1-206ENST00000554226 MPHOSPH9Q99550 1183 aa20.74■□□□□ 0.91
NEDD1-206ENST00000554226 LMOD2Q6P5Q4 547 aa20.73■□□□□ 0.91
NEDD1-206ENST00000554226 ADGRB1O14514 1584 aa20.72■□□□□ 0.91
NEDD1-206ENST00000554226 PRAM1Q96QH2 718 aa20.71■□□□□ 0.91
NEDD1-206ENST00000554226 BTG4Q9NY30 223 aa20.71■□□□□ 0.91
NEDD1-206ENST00000554226 SPATA31A5Q5VU36 1347 aa20.7■□□□□ 0.9
NEDD1-206ENST00000554226 SPATA31A7Q8IWB4 1347 aa20.7■□□□□ 0.9
NEDD1-206ENST00000554226 CFAP70Q5T0N1 1121 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms