RNA–Protein interactions for RNA: ENST00000554171.1

LRFN5-204, Transcript of leucine rich repeat and fibronectin type III domain containing 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LRFN5, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN5-204ENST00000554171 RAB11FIP3O75154 756 aa4.96□□□□□ -1.62
LRFN5-204ENST00000554171 TSNAXIP1Q2TAA8 658 aa4.96□□□□□ -1.62
LRFN5-204ENST00000554171 TAF3Q5VWG9 929 aa4.96□□□□□ -1.62
LRFN5-204ENST00000554171 GIMAP6Q6P9H5 292 aa4.96□□□□□ -1.62
LRFN5-204ENST00000554171 MICAL1Q8TDZ2 1067 aa4.96□□□□□ -1.62
LRFN5-204ENST00000554171 CWC25Q9NXE8 425 aaPredicted RBP4.96□□□□□ -1.62
LRFN5-204ENST00000554171 FSD2A1L4K1 749 aa4.96□□□□□ -1.62
LRFN5-204ENST00000554171 NEXNQ0ZGT2 675 aa4.96□□□□□ -1.62
LRFN5-204ENST00000554171 PDZRN3Q9UPQ7 1066 aa4.96□□□□□ -1.62
LRFN5-204ENST00000554171 BICRAQ9NZM4 1560 aa4.96□□□□□ -1.62
LRFN5-204ENST00000554171 LETM1O95202 739 aaPredicted RBP4.95□□□□□ -1.62
LRFN5-204ENST00000554171 PARNO95453 639 aaKnown RBP4.95□□□□□ -1.62
LRFN5-204ENST00000554171 ZKSCAN2Q63HK3 967 aa4.95□□□□□ -1.62
LRFN5-204ENST00000554171 FAM210AQ96ND0 272 aa4.95□□□□□ -1.62
LRFN5-204ENST00000554171 VIRMAQ69YN4 1812 aaKnown RBP4.95□□□□□ -1.62
LRFN5-204ENST00000554171 PAX7P23759 505 aa4.95□□□□□ -1.62
LRFN5-204ENST00000554171 TXNDC2Q86VQ3 553 aa4.95□□□□□ -1.62
LRFN5-204ENST00000554171 DZIP3Q86Y13 1208 aaKnown RBP4.95□□□□□ -1.62
LRFN5-204ENST00000554171 MIGA1Q8NAN2 632 aa4.95□□□□□ -1.62
LRFN5-204ENST00000554171 CCDC194A0A1B0GVG4 234 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 BBOX1O75936 387 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 GSE1Q14687 1217 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 SEZ6LQ9BYH1 1024 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 RETREG1Q9H6L5 497 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 GNL3LQ9NVN8 582 aaKnown RBP4.94□□□□□ -1.62
LRFN5-204ENST00000554171 TMEM94Q12767 1356 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 PAX3P23760 479 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 GSCP56915 257 aaPredicted RBP4.94□□□□□ -1.62
LRFN5-204ENST00000554171 IFT88Q13099 833 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 CXorf38Q8TB03 319 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 TATDN2Q93075 761 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 CCDC94Q9BW85 323 aaPredicted RBP4.94□□□□□ -1.62
LRFN5-204ENST00000554171 TPM2P07951 284 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 LIG1P18858 919 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 CHMLP26374 656 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 TRPC1P48995 793 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 MMTAG2Q9BU76 263 aaKnown RBP4.94□□□□□ -1.62
LRFN5-204ENST00000554171 DONSONQ9NYP3 566 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 MAGEC2Q9UBF1 373 aaPredicted RBP4.94□□□□□ -1.62
LRFN5-204ENST00000554171 PCDHGA4Q9Y5G9 962 aa4.94□□□□□ -1.62
LRFN5-204ENST00000554171 RGS20O76081 388 aa4.93□□□□□ -1.62
LRFN5-204ENST00000554171 CCDC172P0C7W6 258 aa4.93□□□□□ -1.62
LRFN5-204ENST00000554171 NOL8Q76FK4 1167 aaKnown RBP4.93□□□□□ -1.62
LRFN5-204ENST00000554171 HOXC10Q9NYD6 342 aa4.93□□□□□ -1.62
LRFN5-204ENST00000554171 HOXA10P31260 410 aaPredicted RBP4.93□□□□□ -1.62
LRFN5-204ENST00000554171 POTEDQ86YR6 584 aa4.93□□□□□ -1.62
LRFN5-204ENST00000554171 FNBP4Q8N3X1 1017 aaPredicted RBP4.93□□□□□ -1.62
LRFN5-204ENST00000554171 LARGE2Q8N3Y3 721 aa4.93□□□□□ -1.62
LRFN5-204ENST00000554171 RBM46Q8TBY0 533 aaKnown RBP4.93□□□□□ -1.62
LRFN5-204ENST00000554171 ZNF232Q9UNY5 417 aa4.93□□□□□ -1.62
LRFN5-204ENST00000554171 SETD1BQ9UPS6 1966 aaKnown RBP4.93□□□□□ -1.62
LRFN5-204ENST00000554171 ERBB4Q15303 1308 aa4.93□□□□□ -1.62
LRFN5-204ENST00000554171 HOXD10P28358 340 aa4.93□□□□□ -1.62
LRFN5-204ENST00000554171 NOM1Q5C9Z4 860 aaKnown RBP4.93□□□□□ -1.62
LRFN5-204ENST00000554171 MUC3BQ9H195 1237 aa4.93□□□□□ -1.62
LRFN5-204ENST00000554171 EFCC1Q9HA90 598 aa4.93□□□□□ -1.62
LRFN5-204ENST00000554171 RASA3Q14644 834 aa4.92□□□□□ -1.62
LRFN5-204ENST00000554171 RBM47A0AV96 593 aaKnown RBP4.92□□□□□ -1.62
LRFN5-204ENST00000554171 U2SURPO15042 1029 aaKnown RBP4.92□□□□□ -1.62
LRFN5-204ENST00000554171 TIMM44O43615 452 aa4.92□□□□□ -1.62
LRFN5-204ENST00000554171 PKN1Q16512 942 aa4.92□□□□□ -1.62
LRFN5-204ENST00000554171 RTL5Q5HYW3 569 aaPredicted RBP4.92□□□□□ -1.62
LRFN5-204ENST00000554171 BANK1Q8NDB2 785 aa4.92□□□□□ -1.62
LRFN5-204ENST00000554171 AMOTQ4VCS5 1084 aa4.92□□□□□ -1.62
LRFN5-204ENST00000554171 JMYQ8N9B5 988 aa4.92□□□□□ -1.62
LRFN5-204ENST00000554171 RETREG2Q8NC44 543 aa4.92□□□□□ -1.62
LRFN5-204ENST00000554171 AGBL1Q96MI9 1066 aa4.92□□□□□ -1.62
LRFN5-204ENST00000554171 ENPP1P22413 925 aa4.92□□□□□ -1.62
LRFN5-204ENST00000554171 C8orf37Q96NL8 207 aa4.92□□□□□ -1.62
LRFN5-204ENST00000554171 TEX13AQ9BXU3 409 aaPredicted RBP4.92□□□□□ -1.62
LRFN5-204ENST00000554171 CREB3O43889 395 aa4.91□□□□□ -1.62
LRFN5-204ENST00000554171 C11orf96Q7Z7L8 435 aa4.91□□□□□ -1.62
LRFN5-204ENST00000554171 MED4Q9NPJ6 270 aa4.91□□□□□ -1.62
LRFN5-204ENST00000554171 PNMA2Q9UL42 364 aa4.91□□□□□ -1.62
LRFN5-204ENST00000554171 GOLGA6L3A6NEY3 463 aa4.91□□□□□ -1.62
LRFN5-204ENST00000554171 APPP05067 770 aa4.91□□□□□ -1.62
LRFN5-204ENST00000554171 RBM26Q5T8P6 1007 aaKnown RBP4.91□□□□□ -1.62
LRFN5-204ENST00000554171 NUTM2GQ5VZR2 741 aa4.91□□□□□ -1.62
LRFN5-204ENST00000554171 PCGF5Q86SE9 256 aa4.91□□□□□ -1.62
LRFN5-204ENST00000554171 RBM5P52756 815 aaKnown RBP eCLIP4.9□□□□□ -1.62
LRFN5-204ENST00000554171 RASSF7Q02833 373 aa4.9□□□□□ -1.62
LRFN5-204ENST00000554171 ZC3H15Q8WU90 426 aaKnown RBP4.9□□□□□ -1.62
LRFN5-204ENST00000554171 ZBTB9Q96C00 473 aa4.9□□□□□ -1.62
LRFN5-204ENST00000554171 ZFYVE27Q5T4F4 411 aa4.9□□□□□ -1.62
LRFN5-204ENST00000554171 PABPN1Q86U42 306 aaKnown RBP eCLIP4.9□□□□□ -1.62
LRFN5-204ENST00000554171 SVIPQ8NHG7 77 aa4.9□□□□□ -1.62
LRFN5-204ENST00000554171 FRAT1Q92837 279 aaPredicted RBP4.9□□□□□ -1.62
LRFN5-204ENST00000554171 NCAPGQ9BPX3 1015 aa4.9□□□□□ -1.62
LRFN5-204ENST00000554171 LARP6Q9BRS8 491 aaKnown RBP4.9□□□□□ -1.62
LRFN5-204ENST00000554171 TRAK2O60296 914 aa4.9□□□□□ -1.63
LRFN5-204ENST00000554171 MAP9Q49MG5 647 aa4.9□□□□□ -1.63
LRFN5-204ENST00000554171 ANKRD13BQ86YJ7 626 aa4.9□□□□□ -1.63
LRFN5-204ENST00000554171 CALR3Q96L12 384 aaKnown RBP4.9□□□□□ -1.63
LRFN5-204ENST00000554171 ANP32AP39687 249 aaKnown RBP4.89□□□□□ -1.63
LRFN5-204ENST00000554171 HDLBPQ00341 1268 aaKnown RBP4.89□□□□□ -1.63
LRFN5-204ENST00000554171 IPO9Q96P70 1041 aaKnown RBP4.89□□□□□ -1.63
LRFN5-204ENST00000554171 IL16Q14005 1332 aa4.89□□□□□ -1.63
LRFN5-204ENST00000554171 EIF3JO75822 258 aaKnown RBP4.89□□□□□ -1.63
LRFN5-204ENST00000554171 PLPP6Q8IY26 295 aa4.89□□□□□ -1.63
LRFN5-204ENST00000554171 KLHL42Q9P2K6 505 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms