RNA–Protein interactions for RNA: ENST00000554145.1

ZFYVE1-204, Transcript of zinc finger FYVE-type containing 1, humanhuman

TSL 4

Gene ZFYVE1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE1-204ENST00000554145 KIF1BO60333 1816 aa13.96□□□□□ -0.17
ZFYVE1-204ENST00000554145 LAMC1P11047 1609 aa13.96□□□□□ -0.17
ZFYVE1-204ENST00000554145 NEXMIFQ5QGS0 1516 aa13.95□□□□□ -0.18
ZFYVE1-204ENST00000554145 XPCQ01831 940 aaPredicted RBP13.95□□□□□ -0.18
ZFYVE1-204ENST00000554145 TRPC5Q9UL62 973 aaPredicted RBP13.95□□□□□ -0.18
ZFYVE1-204ENST00000554145 ATRNO75882 1429 aa13.95□□□□□ -0.18
ZFYVE1-204ENST00000554145 COL22A1Q8NFW1 1626 aaPredicted RBP13.94□□□□□ -0.18
ZFYVE1-204ENST00000554145 EP400Q96L91 3159 aa13.93□□□□□ -0.18
ZFYVE1-204ENST00000554145 ACIN1Q9UKV3 1341 aaKnown RBP13.93□□□□□ -0.18
ZFYVE1-204ENST00000554145 ROBO2Q9HCK4 1378 aa13.92□□□□□ -0.18
ZFYVE1-204ENST00000554145 SOS2Q07890 1332 aaPredicted RBP13.91□□□□□ -0.18
ZFYVE1-204ENST00000554145 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
ZFYVE1-204ENST00000554145 BCL9LQ86UU0 1499 aa13.91□□□□□ -0.18
ZFYVE1-204ENST00000554145 PTCH1Q13635 1447 aa13.9□□□□□ -0.18
ZFYVE1-204ENST00000554145 DEFB132Q7Z7B7 95 aa13.9□□□□□ -0.18
ZFYVE1-204ENST00000554145 GLI3P10071 1580 aa13.9□□□□□ -0.18
ZFYVE1-204ENST00000554145 NUTM2FA1L443 756 aa13.89□□□□□ -0.19
ZFYVE1-204ENST00000554145 FNBP4Q8N3X1 1017 aaPredicted RBP13.89□□□□□ -0.19
ZFYVE1-204ENST00000554145 MYOM2P54296 1465 aa13.88□□□□□ -0.19
ZFYVE1-204ENST00000554145 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.87□□□□□ -0.19
ZFYVE1-204ENST00000554145 PXDNQ92626 1479 aa13.87□□□□□ -0.19
ZFYVE1-204ENST00000554145 RGPD8O14715 1765 aaPredicted RBP13.86□□□□□ -0.19
ZFYVE1-204ENST00000554145 ESCO1Q5FWF5 840 aa13.86□□□□□ -0.19
ZFYVE1-204ENST00000554145 PPLO60437 1756 aa13.86□□□□□ -0.19
ZFYVE1-204ENST00000554145 GJD4Q96KN9 370 aaPredicted RBP13.85□□□□□ -0.19
ZFYVE1-204ENST00000554145 RALGAPBQ86X10 1494 aa13.85□□□□□ -0.19
ZFYVE1-204ENST00000554145 PSDA5PKW4 1024 aaPredicted RBP13.84□□□□□ -0.19
ZFYVE1-204ENST00000554145 FOXO3O43524 673 aa13.84□□□□□ -0.19
ZFYVE1-204ENST00000554145 PLCH1Q4KWH8 1693 aa13.84□□□□□ -0.19
ZFYVE1-204ENST00000554145 LRP5O75197 1615 aa13.83□□□□□ -0.2
ZFYVE1-204ENST00000554145 FOXD1Q16676 465 aa13.83□□□□□ -0.2
ZFYVE1-204ENST00000554145 BLMP54132 1417 aaPredicted RBP13.82□□□□□ -0.2
ZFYVE1-204ENST00000554145 USP32Q8NFA0 1604 aa13.82□□□□□ -0.2
ZFYVE1-204ENST00000554145 CDC42BPGQ6DT37 1551 aa13.81□□□□□ -0.2
ZFYVE1-204ENST00000554145 CCDC125Q86Z20 511 aa13.8□□□□□ -0.2
ZFYVE1-204ENST00000554145 ABCA3Q99758 1704 aa13.8□□□□□ -0.2
ZFYVE1-204ENST00000554145 NPHP3Q7Z494 1330 aa13.8□□□□□ -0.2
ZFYVE1-204ENST00000554145 STK26Q9P289 416 aa13.79□□□□□ -0.2
ZFYVE1-204ENST00000554145 SLIT2O94813 1529 aa13.79□□□□□ -0.2
ZFYVE1-204ENST00000554145 FMN2Q9NZ56 1722 aa13.78□□□□□ -0.2
ZFYVE1-204ENST00000554145 WAPLQ7Z5K2 1190 aa13.78□□□□□ -0.2
ZFYVE1-204ENST00000554145 UNC5CLQ8IV45 518 aa13.78□□□□□ -0.2
ZFYVE1-204ENST00000554145 SEPT12Q8IYM1 358 aa13.78□□□□□ -0.2
ZFYVE1-204ENST00000554145 CABLES1Q8TDN4 633 aa13.78□□□□□ -0.2
ZFYVE1-204ENST00000554145 CCDC9Q9Y3X0 531 aaKnown RBP13.78□□□□□ -0.2
ZFYVE1-204ENST00000554145 IFT172Q9UG01 1749 aa13.78□□□□□ -0.2
ZFYVE1-204ENST00000554145 SF3B2Q13435 895 aaKnown RBP13.77□□□□□ -0.21
ZFYVE1-204ENST00000554145 PLEKHH1Q9ULM0 1364 aa13.77□□□□□ -0.21
ZFYVE1-204ENST00000554145 A0A0G2JS52 829 aa13.76□□□□□ -0.21
ZFYVE1-204ENST00000554145 MYT1Q01538 1121 aa13.76□□□□□ -0.21
ZFYVE1-204ENST00000554145 TIMELESSQ9UNS1 1208 aa13.76□□□□□ -0.21
ZFYVE1-204ENST00000554145 HAP1P54257 671 aaPredicted RBP13.75□□□□□ -0.21
ZFYVE1-204ENST00000554145 FAM182BQ5T319 152 aa13.75□□□□□ -0.21
ZFYVE1-204ENST00000554145 KIF1AQ12756 1690 aa13.75□□□□□ -0.21
ZFYVE1-204ENST00000554145 NWD2Q9ULI1 1742 aa13.74□□□□□ -0.21
ZFYVE1-204ENST00000554145 VGFO15240 615 aaPredicted RBP13.74□□□□□ -0.21
ZFYVE1-204ENST00000554145 NRAPQ86VF7 1730 aa13.73□□□□□ -0.21
ZFYVE1-204ENST00000554145 LMOD2Q6P5Q4 547 aa13.73□□□□□ -0.21
ZFYVE1-204ENST00000554145 KNDC1Q76NI1 1749 aa13.73□□□□□ -0.21
ZFYVE1-204ENST00000554145 PRAG1Q86YV5 1406 aa13.73□□□□□ -0.21
ZFYVE1-204ENST00000554145 SPATA31A3Q5VYP0 1347 aa13.72□□□□□ -0.21
ZFYVE1-204ENST00000554145 ADGRF5Q8IZF2 1346 aa13.72□□□□□ -0.21
ZFYVE1-204ENST00000554145 TMEM132EQ6IEE7 984 aa13.72□□□□□ -0.21
ZFYVE1-204ENST00000554145 RGPD1P0DJD0 1748 aa13.72□□□□□ -0.21
ZFYVE1-204ENST00000554145 TNS1Q9HBL0 1735 aaKnown RBP13.71□□□□□ -0.21
ZFYVE1-204ENST00000554145 KRT28Q7Z3Y7 464 aa13.71□□□□□ -0.21
ZFYVE1-204ENST00000554145 KRT27Q7Z3Y8 459 aa13.71□□□□□ -0.21
ZFYVE1-204ENST00000554145 ZNF316A6NFI3 1004 aaPredicted RBP13.7□□□□□ -0.22
ZFYVE1-204ENST00000554145 EN1Q05925 392 aaPredicted RBP13.7□□□□□ -0.22
ZFYVE1-204ENST00000554145 MPHOSPH9Q99550 1183 aa13.7□□□□□ -0.22
ZFYVE1-204ENST00000554145 LRPPRCP42704 1394 aaKnown RBP13.7□□□□□ -0.22
ZFYVE1-204ENST00000554145 TONSLQ96HA7 1378 aa13.7□□□□□ -0.22
ZFYVE1-204ENST00000554145 R3HDM1Q15032 1099 aaKnown RBP13.69□□□□□ -0.22
ZFYVE1-204ENST00000554145 VPS72Q15906 364 aa13.69□□□□□ -0.22
ZFYVE1-204ENST00000554145 FAM98CQ17RN3 349 aaKnown RBP13.69□□□□□ -0.22
ZFYVE1-204ENST00000554145 RGL3Q3MIN7 710 aa13.69□□□□□ -0.22
ZFYVE1-204ENST00000554145 SIN3AQ96ST3 1273 aa13.69□□□□□ -0.22
ZFYVE1-204ENST00000554145 TNS3Q68CZ2 1445 aa13.69□□□□□ -0.22
ZFYVE1-204ENST00000554145 CCDC144AA2RUR9 1427 aa13.68□□□□□ -0.22
ZFYVE1-204ENST00000554145 NEUROD1Q13562 356 aa13.68□□□□□ -0.22
ZFYVE1-204ENST00000554145 BAG6P46379 1132 aa13.67□□□□□ -0.22
ZFYVE1-204ENST00000554145 SAFB2Q14151 953 aaKnown RBP eCLIP13.67□□□□□ -0.22
ZFYVE1-204ENST00000554145 FAM83GA6ND36 823 aa13.66□□□□□ -0.22
ZFYVE1-204ENST00000554145 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
ZFYVE1-204ENST00000554145 RPGRIP1LQ68CZ1 1315 aa13.64□□□□□ -0.23
ZFYVE1-204ENST00000554145 ANKRD30BQ9BXX2 1392 aa13.64□□□□□ -0.23
ZFYVE1-204ENST00000554145 EZH2Q15910 746 aaKnown RBP13.64□□□□□ -0.23
ZFYVE1-204ENST00000554145 PMFBP1Q8TBY8 1022 aa13.64□□□□□ -0.23
ZFYVE1-204ENST00000554145 PHF8Q9UPP1 1060 aa13.64□□□□□ -0.23
ZFYVE1-204ENST00000554145 TRPM3Q9HCF6 1732 aaPredicted RBP13.64□□□□□ -0.23
ZFYVE1-204ENST00000554145 TECPR2O15040 1411 aa13.64□□□□□ -0.23
ZFYVE1-204ENST00000554145 BTG4Q9NY30 223 aa13.63□□□□□ -0.23
ZFYVE1-204ENST00000554145 COL14A1Q05707 1796 aaKnown RBP13.63□□□□□ -0.23
ZFYVE1-204ENST00000554145 ONECUT3O60422 494 aaPredicted RBP13.62□□□□□ -0.23
ZFYVE1-204ENST00000554145 YTHDC2Q9H6S0 1430 aaKnown RBP13.62□□□□□ -0.23
ZFYVE1-204ENST00000554145 CRYBG1Q9Y4K1 1723 aa13.61□□□□□ -0.23
ZFYVE1-204ENST00000554145 NRXN1Q9ULB1 1477 aa13.61□□□□□ -0.23
ZFYVE1-204ENST00000554145 ALS2Q96Q42 1657 aa13.61□□□□□ -0.23
ZFYVE1-204ENST00000554145 THSD7AQ9UPZ6 1657 aa13.61□□□□□ -0.23
ZFYVE1-204ENST00000554145 PSME1Q06323 249 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms