RNA–Protein interactions for RNA: ENST00000553889.5

PRKCH-209, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-209ENST00000553889 GOLGA2Q08379 1002 aa12.2□□□□□ -0.46
PRKCH-209ENST00000553889 B4GALNT3Q6L9W6 998 aa12.2□□□□□ -0.46
PRKCH-209ENST00000553889 YTHDC2Q9H6S0 1430 aaKnown RBP12.2□□□□□ -0.46
PRKCH-209ENST00000553889 ATAD2Q6PL18 1390 aa12.19□□□□□ -0.46
PRKCH-209ENST00000553889 SLFN5Q08AF3 891 aa12.19□□□□□ -0.46
PRKCH-209ENST00000553889 TMEM132EQ6IEE7 984 aa12.19□□□□□ -0.46
PRKCH-209ENST00000553889 CDCA7LQ96GN5 454 aa12.19□□□□□ -0.46
PRKCH-209ENST00000553889 A2ML1A8K2U0 1454 aa12.19□□□□□ -0.46
PRKCH-209ENST00000553889 ALKQ9UM73 1620 aa12.19□□□□□ -0.46
PRKCH-209ENST00000553889 ABCC11Q96J66 1382 aa12.18□□□□□ -0.46
PRKCH-209ENST00000553889 MYO5BQ9ULV0 1848 aa12.18□□□□□ -0.46
PRKCH-209ENST00000553889 SIRT1Q96EB6 747 aa12.18□□□□□ -0.46
PRKCH-209ENST00000553889 CCDC136Q96JN2 1154 aa12.18□□□□□ -0.46
PRKCH-209ENST00000553889 SHPRHQ149N8 1683 aa12.17□□□□□ -0.46
PRKCH-209ENST00000553889 SLC12A5Q9H2X9 1139 aa12.17□□□□□ -0.46
PRKCH-209ENST00000553889 E9PSI1 815 aa12.16□□□□□ -0.46
PRKCH-209ENST00000553889 CCDC27Q2M243 656 aa12.16□□□□□ -0.46
PRKCH-209ENST00000553889 MORC1Q86VD1 984 aa12.16□□□□□ -0.46
PRKCH-209ENST00000553889 KIF13AQ9H1H9 1805 aa12.16□□□□□ -0.46
PRKCH-209ENST00000553889 SETD1AO15047 1707 aaKnown RBP12.15□□□□□ -0.46
PRKCH-209ENST00000553889 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.15□□□□□ -0.46
PRKCH-209ENST00000553889 TECPR2O15040 1411 aa12.14□□□□□ -0.47
PRKCH-209ENST00000553889 NKTRP30414 1462 aaKnown RBP12.14□□□□□ -0.47
PRKCH-209ENST00000553889 IQSEC2Q5JU85 1478 aa12.14□□□□□ -0.47
PRKCH-209ENST00000553889 NLRP1Q9C000 1473 aa12.14□□□□□ -0.47
PRKCH-209ENST00000553889 MS4A1P11836 297 aa12.13□□□□□ -0.47
PRKCH-209ENST00000553889 FBXO31Q5XUX0 539 aaPredicted RBP12.13□□□□□ -0.47
PRKCH-209ENST00000553889 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.13□□□□□ -0.47
PRKCH-209ENST00000553889 EXOC6Q8TAG9 804 aa12.13□□□□□ -0.47
PRKCH-209ENST00000553889 ANKRD26Q9UPS8 1709 aa12.13□□□□□ -0.47
PRKCH-209ENST00000553889 CD163L1Q9NR16 1453 aa12.13□□□□□ -0.47
PRKCH-209ENST00000553889 RIMS2Q9UQ26 1411 aa12.12□□□□□ -0.47
PRKCH-209ENST00000553889 TCERG1O14776 1098 aaKnown RBP12.12□□□□□ -0.47
PRKCH-209ENST00000553889 WDR63Q8IWG1 891 aa12.12□□□□□ -0.47
PRKCH-209ENST00000553889 RUNDC1Q96C34 613 aa12.12□□□□□ -0.47
PRKCH-209ENST00000553889 CFAP53Q96M91 514 aa12.12□□□□□ -0.47
PRKCH-209ENST00000553889 TERF2IPQ9NYB0 399 aa12.12□□□□□ -0.47
PRKCH-209ENST00000553889 FAM135BQ49AJ0 1406 aa12.11□□□□□ -0.47
PRKCH-209ENST00000553889 ATP7BP35670 1465 aa12.11□□□□□ -0.47
PRKCH-209ENST00000553889 A0A1W2PP64 1363 aa12.11□□□□□ -0.47
PRKCH-209ENST00000553889 APAF1O14727 1248 aa12.11□□□□□ -0.47
PRKCH-209ENST00000553889 TSPOAP1O95153 1857 aa12.1□□□□□ -0.47
PRKCH-209ENST00000553889 ADGRB2O60241 1585 aa12.1□□□□□ -0.47
PRKCH-209ENST00000553889 PNPLA6Q8IY17 1366 aa12.1□□□□□ -0.47
PRKCH-209ENST00000553889 HDGFP51858 240 aaKnown RBP12.1□□□□□ -0.47
PRKCH-209ENST00000553889 AAMPQ13685 434 aa12.1□□□□□ -0.47
PRKCH-209ENST00000553889 KNDC1Q76NI1 1749 aa12.1□□□□□ -0.47
PRKCH-209ENST00000553889 COL3A1P02461 1466 aaPredicted RBP12.09□□□□□ -0.47
PRKCH-209ENST00000553889 ZMYM3Q14202 1370 aa12.09□□□□□ -0.47
PRKCH-209ENST00000553889 NRXN3Q9Y4C0 1643 aa12.09□□□□□ -0.47
PRKCH-209ENST00000553889 WWC1Q8IX03 1113 aa12.09□□□□□ -0.47
PRKCH-209ENST00000553889 SALL2Q9Y467 1007 aaPredicted RBP12.09□□□□□ -0.47
PRKCH-209ENST00000553889 PRAM1Q96QH2 718 aa12.08□□□□□ -0.48
PRKCH-209ENST00000553889 ANP32EQ9BTT0 268 aa12.08□□□□□ -0.48
PRKCH-209ENST00000553889 CDC42BPGQ6DT37 1551 aa12.08□□□□□ -0.48
PRKCH-209ENST00000553889 CT47B1P0C2W7 299 aaPredicted RBP12.07□□□□□ -0.48
PRKCH-209ENST00000553889 MTHFSP49914 203 aa12.07□□□□□ -0.48
PRKCH-209ENST00000553889 PDE3AQ14432 1141 aa12.07□□□□□ -0.48
PRKCH-209ENST00000553889 CABP2Q9NPB3 220 aa12.07□□□□□ -0.48
PRKCH-209ENST00000553889 KDM2BQ8NHM5 1336 aa12.07□□□□□ -0.48
PRKCH-209ENST00000553889 CPS1P31327 1500 aa12.06□□□□□ -0.48
PRKCH-209ENST00000553889 CPSF1Q10570 1443 aaKnown RBP12.06□□□□□ -0.48
PRKCH-209ENST00000553889 FYB1O15117 783 aa12.06□□□□□ -0.48
PRKCH-209ENST00000553889 PLPPR3Q6T4P5 718 aa12.06□□□□□ -0.48
PRKCH-209ENST00000553889 POGKQ9P215 609 aa12.06□□□□□ -0.48
PRKCH-209ENST00000553889 TNRQ92752 1358 aa12.05□□□□□ -0.48
PRKCH-209ENST00000553889 SRPK2P78362 688 aaKnown RBP12.05□□□□□ -0.48
PRKCH-209ENST00000553889 HDGFL2Q7Z4V5 671 aaPredicted RBP12.05□□□□□ -0.48
PRKCH-209ENST00000553889 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
PRKCH-209ENST00000553889 CRBNQ96SW2 442 aa12.05□□□□□ -0.48
PRKCH-209ENST00000553889 CDK19Q9BWU1 502 aa12.05□□□□□ -0.48
PRKCH-209ENST00000553889 SPINK5Q9NQ38 1064 aaPredicted RBP12.05□□□□□ -0.48
PRKCH-209ENST00000553889 STAG3Q9UJ98 1225 aa12.05□□□□□ -0.48
PRKCH-209ENST00000553889 IL16Q14005 1332 aa12.05□□□□□ -0.48
PRKCH-209ENST00000553889 SENP3-EIF4A1A0A087X0R7 540 aa12.04□□□□□ -0.48
PRKCH-209ENST00000553889 NUTM2DQ5VT03 806 aaPredicted RBP12.04□□□□□ -0.48
PRKCH-209ENST00000553889 CENPQQ7L2Z9 268 aaPredicted RBP12.04□□□□□ -0.48
PRKCH-209ENST00000553889 CCDC146Q8IYE0 955 aa12.04□□□□□ -0.48
PRKCH-209ENST00000553889 PNNQ9H307 717 aaKnown RBP12.03□□□□□ -0.48
PRKCH-209ENST00000553889 STK26Q9P289 416 aa12.03□□□□□ -0.48
PRKCH-209ENST00000553889 AATKQ6ZMQ8 1374 aa12.03□□□□□ -0.48
PRKCH-209ENST00000553889 TMEM2Q9UHN6 1383 aa12.03□□□□□ -0.48
PRKCH-209ENST00000553889 EDC4Q6P2E9 1401 aaKnown RBP12.03□□□□□ -0.48
PRKCH-209ENST00000553889 PLEKHF1Q96S99 279 aa12.02□□□□□ -0.49
PRKCH-209ENST00000553889 MINK1Q8N4C8 1332 aaPredicted RBP12.02□□□□□ -0.49
PRKCH-209ENST00000553889 UBR1Q8IWV7 1749 aa12.02□□□□□ -0.49
PRKCH-209ENST00000553889 KIF20BQ96Q89 1820 aa12.02□□□□□ -0.49
PRKCH-209ENST00000553889 MSH5O43196 834 aa12.01□□□□□ -0.49
PRKCH-209ENST00000553889 PLIN1O60240 522 aa12.01□□□□□ -0.49
PRKCH-209ENST00000553889 PLEKHG1Q9ULL1 1385 aa12.01□□□□□ -0.49
PRKCH-209ENST00000553889 WASLO00401 505 aaPredicted RBP12□□□□□ -0.49
PRKCH-209ENST00000553889 C20orf194Q5TEA3 1177 aa12□□□□□ -0.49
PRKCH-209ENST00000553889 ESF1Q9H501 851 aaKnown RBP12□□□□□ -0.49
PRKCH-209ENST00000553889 MYH16Q9H6N6 1097 aa12□□□□□ -0.49
PRKCH-209ENST00000553889 DMRT2Q9Y5R5 561 aa12□□□□□ -0.49
PRKCH-209ENST00000553889 ARHGAP23Q9P227 1491 aa12□□□□□ -0.49
PRKCH-209ENST00000553889 FCHSD2O94868 740 aa11.99□□□□□ -0.49
PRKCH-209ENST00000553889 BACH2Q9BYV9 841 aa11.99□□□□□ -0.49
PRKCH-209ENST00000553889 CABP1Q9NZU7 370 aa11.99□□□□□ -0.49
PRKCH-209ENST00000553889 METP08581 1390 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms