RNA–Protein interactions for RNA: ENST00000553772.5

COCH-206, Transcript of cochlin, humanhuman

TSL 4

Gene COCH, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COCH-206ENST00000553772 PLEKHH1Q9ULM0 1364 aa28.51■■■□□ 2.16
COCH-206ENST00000553772 ATF3P18847 181 aa28.51■■■□□ 2.15
COCH-206ENST00000553772 ROCK2O75116 1388 aaKnown RBP28.5■■■□□ 2.15
COCH-206ENST00000553772 PRAM1Q96QH2 718 aa28.5■■■□□ 2.15
COCH-206ENST00000553772 CDC42BPGQ6DT37 1551 aa28.48■■■□□ 2.15
COCH-206ENST00000553772 POGKQ9P215 609 aa28.47■■■□□ 2.15
COCH-206ENST00000553772 SLAIN2Q9P270 581 aa28.46■■■□□ 2.15
COCH-206ENST00000553772 ILDR1Q86SU0 546 aaPredicted RBP28.44■■■□□ 2.14
COCH-206ENST00000553772 ADGRB2O60241 1585 aa28.43■■■□□ 2.14
COCH-206ENST00000553772 MST1RQ04912 1400 aa28.43■■■□□ 2.14
COCH-206ENST00000553772 PIP4K2BP78356 416 aa28.42■■■□□ 2.14
COCH-206ENST00000553772 SAFB2Q14151 953 aaKnown RBP eCLIP28.39■■■□□ 2.14
COCH-206ENST00000553772 CARD11Q9BXL7 1154 aa28.39■■■□□ 2.14
COCH-206ENST00000553772 ROBO1Q9Y6N7 1651 aa28.38■■■□□ 2.13
COCH-206ENST00000553772 SCAF1Q9H7N4 1312 aaKnown RBP28.38■■■□□ 2.13
COCH-206ENST00000553772 EIF3AQ14152 1382 aaKnown RBP28.37■■■□□ 2.13
COCH-206ENST00000553772 FMN2Q9NZ56 1722 aa28.37■■■□□ 2.13
COCH-206ENST00000553772 CENPJQ9HC77 1338 aaPredicted RBP28.36■■■□□ 2.13
COCH-206ENST00000553772 C1orf167Q5SNV9 1468 aa28.35■■■□□ 2.13
COCH-206ENST00000553772 QRICH2Q9H0J4 1663 aa28.32■■■□□ 2.12
COCH-206ENST00000553772 MINK1Q8N4C8 1332 aaPredicted RBP28.32■■■□□ 2.12
COCH-206ENST00000553772 BRINP3Q76B58 766 aa28.29■■■□□ 2.12
COCH-206ENST00000553772 WASLO00401 505 aaPredicted RBP28.28■■■□□ 2.12
COCH-206ENST00000553772 HIRIP3Q9BW71 556 aaPredicted RBP28.28■■■□□ 2.12
COCH-206ENST00000553772 ANKARQ7Z5J8 1434 aa28.27■■■□□ 2.12
COCH-206ENST00000553772 SBNO2Q9Y2G9 1366 aa28.26■■■□□ 2.12
COCH-206ENST00000553772 TULP4Q9NRJ4 1543 aa28.25■■■□□ 2.11
COCH-206ENST00000553772 AHDC1Q5TGY3 1603 aaPredicted RBP28.25■■■□□ 2.11
COCH-206ENST00000553772 RGPD8O14715 1765 aaPredicted RBP28.24■■■□□ 2.11
COCH-206ENST00000553772 HSPA1LP34931 641 aa28.24■■■□□ 2.11
COCH-206ENST00000553772 NHSL1Q5SYE7 1610 aa28.23■■■□□ 2.11
COCH-206ENST00000553772 USP32Q8NFA0 1604 aa28.23■■■□□ 2.11
COCH-206ENST00000553772 ORAI2Q96SN7 254 aa28.22■■■□□ 2.11
COCH-206ENST00000553772 PHLPP1O60346 1717 aa28.21■■■□□ 2.11
COCH-206ENST00000553772 KIF1AQ12756 1690 aa28.2■■■□□ 2.11
COCH-206ENST00000553772 NUTM2FA1L443 756 aa28.2■■■□□ 2.1
COCH-206ENST00000553772 ESCO1Q5FWF5 840 aa28.2■■■□□ 2.1
COCH-206ENST00000553772 CDK19Q9BWU1 502 aa28.2■■■□□ 2.1
COCH-206ENST00000553772 USP47Q96K76 1375 aa28.19■■■□□ 2.1
COCH-206ENST00000553772 ITSN1Q15811 1721 aa28.18■■■□□ 2.1
COCH-206ENST00000553772 EVC2Q86UK5 1308 aa28.17■■■□□ 2.1
COCH-206ENST00000553772 PRR36Q9H6K5 1346 aa28.17■■■□□ 2.1
COCH-206ENST00000553772 ATP7BP35670 1465 aa28.16■■■□□ 2.1
COCH-206ENST00000553772 SLC24A1O60721 1099 aa28.16■■■□□ 2.1
COCH-206ENST00000553772 COL16A1Q07092 1604 aaPredicted RBP28.16■■■□□ 2.1
COCH-206ENST00000553772 ST20-MTHFSA0A0A6YYL1 179 aa28.14■■■□□ 2.1
COCH-206ENST00000553772 NUDT16Q96DE0 195 aaKnown RBP28.14■■■□□ 2.1
COCH-206ENST00000553772 PHF8Q9UPP1 1060 aa28.13■■■□□ 2.09
COCH-206ENST00000553772 NPHP3Q7Z494 1330 aa28.13■■■□□ 2.09
COCH-206ENST00000553772 TOPAZ1Q8N9V7 1692 aa28.13■■■□□ 2.09
COCH-206ENST00000553772 TESK2Q96S53 571 aa28.12■■■□□ 2.09
COCH-206ENST00000553772 SRPK2P78362 688 aaKnown RBP28.11■■■□□ 2.09
COCH-206ENST00000553772 CCDC61Q9Y6R9 512 aa28.11■■■□□ 2.09
COCH-206ENST00000553772 SOS2Q07890 1332 aaPredicted RBP28.1■■■□□ 2.09
COCH-206ENST00000553772 CABP2Q9NPB3 220 aa28.08■■■□□ 2.09
COCH-206ENST00000553772 FOXO3O43524 673 aa28.07■■■□□ 2.08
COCH-206ENST00000553772 PUS7Q96PZ0 661 aaKnown RBP28.07■■■□□ 2.08
COCH-206ENST00000553772 DDX17Q92841 729 aaKnown RBP28.06■■■□□ 2.08
COCH-206ENST00000553772 PXDNQ92626 1479 aa28.06■■■□□ 2.08
COCH-206ENST00000553772 LRRC59Q96AG4 307 aaKnown RBP28.05■■■□□ 2.08
COCH-206ENST00000553772 ATAD2Q6PL18 1390 aa28.04■■■□□ 2.08
COCH-206ENST00000553772 PLEKHG3A1L390 1219 aa28.04■■■□□ 2.08
COCH-206ENST00000553772 EIF4G2P78344 907 aaKnown RBP eCLIP28.04■■■□□ 2.08
COCH-206ENST00000553772 JCADQ9P266 1359 aa28.03■■■□□ 2.08
COCH-206ENST00000553772 PMFBP1Q8TBY8 1022 aa28.03■■■□□ 2.08
COCH-206ENST00000553772 SHPRHQ149N8 1683 aa28.02■■■□□ 2.08
COCH-206ENST00000553772 PPIP5K1Q6PFW1 1433 aa28.01■■■□□ 2.08
COCH-206ENST00000553772 POLR3AO14802 1390 aaPredicted RBP28.01■■■□□ 2.07
COCH-206ENST00000553772 TMF1P82094 1093 aa27.99■■■□□ 2.07
COCH-206ENST00000553772 PSME1Q06323 249 aa27.99■■■□□ 2.07
COCH-206ENST00000553772 KRT28Q7Z3Y7 464 aa27.99■■■□□ 2.07
COCH-206ENST00000553772 NGDNQ8NEJ9 315 aaKnown RBP27.99■■■□□ 2.07
COCH-206ENST00000553772 SBNO1A3KN83 1393 aa27.97■■■□□ 2.07
COCH-206ENST00000553772 HSPA5P11021 654 aaKnown RBP27.96■■■□□ 2.07
COCH-206ENST00000553772 ACEP12821 1306 aa27.95■■■□□ 2.07
COCH-206ENST00000553772 XPCQ01831 940 aaPredicted RBP27.95■■■□□ 2.06
COCH-206ENST00000553772 CDCA8Q53HL2 280 aa27.95■■■□□ 2.06
COCH-206ENST00000553772 CABP1Q9NZU7 370 aa27.95■■■□□ 2.06
COCH-206ENST00000553772 DISP3Q9P2K9 1392 aa27.95■■■□□ 2.06
COCH-206ENST00000553772 TRPM3Q9HCF6 1732 aaPredicted RBP27.95■■■□□ 2.06
COCH-206ENST00000553772 SPATA31A3Q5VYP0 1347 aa27.93■■■□□ 2.06
COCH-206ENST00000553772 PNPLA6Q8IY17 1366 aa27.93■■■□□ 2.06
COCH-206ENST00000553772 SPATA31A6Q5VVP1 1343 aa27.92■■■□□ 2.06
COCH-206ENST00000553772 NINLQ9Y2I6 1382 aa27.92■■■□□ 2.06
COCH-206ENST00000553772 COL22A1Q8NFW1 1626 aaPredicted RBP27.92■■■□□ 2.06
COCH-206ENST00000553772 TNS3Q68CZ2 1445 aa27.92■■■□□ 2.06
COCH-206ENST00000553772 BRD4O60885 1362 aaPredicted RBP27.91■■■□□ 2.06
COCH-206ENST00000553772 AKAP12Q02952 1782 aa27.9■■■□□ 2.06
COCH-206ENST00000553772 ZNF692Q9BU19 519 aaPredicted RBP27.89■■■□□ 2.06
COCH-206ENST00000553772 ALS2Q96Q42 1657 aa27.88■■■□□ 2.05
COCH-206ENST00000553772 ARHGEF10O15013 1369 aa27.87■■■□□ 2.05
COCH-206ENST00000553772 CPSF1Q10570 1443 aaKnown RBP27.87■■■□□ 2.05
COCH-206ENST00000553772 USP6P35125 1406 aa27.85■■■□□ 2.05
COCH-206ENST00000553772 ZEB1P37275 1124 aaPredicted RBP27.85■■■□□ 2.05
COCH-206ENST00000553772 MED1Q15648 1581 aaPredicted RBP27.83■■■□□ 2.05
COCH-206ENST00000553772 TMC1Q8TDI8 760 aa27.83■■■□□ 2.05
COCH-206ENST00000553772 SLC12A5Q9H2X9 1139 aa27.83■■■□□ 2.05
COCH-206ENST00000553772 MON2Q7Z3U7 1717 aa27.83■■■□□ 2.05
COCH-206ENST00000553772 CD163L1Q9NR16 1453 aa27.83■■■□□ 2.04
COCH-206ENST00000553772 SSH2Q76I76 1423 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms