RNA–Protein interactions for RNA: ENST00000553656.5

TUBB3-202, Transcript of tubulin beta 3 class III, humanhuman

TSL 4

Gene TUBB3, Length 550 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-202ENST00000553656 DCCP43146 1447 aa19.68■□□□□ 0.74
TUBB3-202ENST00000553656 FBXO41Q8TF61 875 aa19.67■□□□□ 0.74
TUBB3-202ENST00000553656 CARD11Q9BXL7 1154 aa19.67■□□□□ 0.74
TUBB3-202ENST00000553656 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.66■□□□□ 0.74
TUBB3-202ENST00000553656 SAFB2Q14151 953 aaKnown RBP eCLIP19.66■□□□□ 0.74
TUBB3-202ENST00000553656 SCAF1Q9H7N4 1312 aaKnown RBP19.66■□□□□ 0.74
TUBB3-202ENST00000553656 EIF3AQ14152 1382 aaKnown RBP19.66■□□□□ 0.74
TUBB3-202ENST00000553656 ARHGEF28Q8N1W1 1705 aaKnown RBP19.65■□□□□ 0.74
TUBB3-202ENST00000553656 GPRASP1Q5JY77 1395 aa19.65■□□□□ 0.74
TUBB3-202ENST00000553656 PIP4K2BP78356 416 aa19.64■□□□□ 0.73
TUBB3-202ENST00000553656 CDC42BPGQ6DT37 1551 aa19.61■□□□□ 0.73
TUBB3-202ENST00000553656 CENPJQ9HC77 1338 aaPredicted RBP19.61■□□□□ 0.73
TUBB3-202ENST00000553656 MINK1Q8N4C8 1332 aaPredicted RBP19.6■□□□□ 0.73
TUBB3-202ENST00000553656 SLAIN2Q9P270 581 aa19.6■□□□□ 0.73
TUBB3-202ENST00000553656 ADGRB2O60241 1585 aa19.57■□□□□ 0.72
TUBB3-202ENST00000553656 HIRIP3Q9BW71 556 aaPredicted RBP19.57■□□□□ 0.72
TUBB3-202ENST00000553656 QRICH2Q9H0J4 1663 aa19.56■□□□□ 0.72
TUBB3-202ENST00000553656 MST1RQ04912 1400 aa19.56■□□□□ 0.72
TUBB3-202ENST00000553656 USP47Q96K76 1375 aa19.53■□□□□ 0.72
TUBB3-202ENST00000553656 FMN2Q9NZ56 1722 aa19.53■□□□□ 0.72
TUBB3-202ENST00000553656 C1orf167Q5SNV9 1468 aa19.53■□□□□ 0.72
TUBB3-202ENST00000553656 ROBO1Q9Y6N7 1651 aa19.52■□□□□ 0.72
TUBB3-202ENST00000553656 NUTM2FA1L443 756 aa19.52■□□□□ 0.72
TUBB3-202ENST00000553656 WASLO00401 505 aaPredicted RBP19.52■□□□□ 0.72
TUBB3-202ENST00000553656 ILDR1Q86SU0 546 aaPredicted RBP19.5■□□□□ 0.71
TUBB3-202ENST00000553656 ANKARQ7Z5J8 1434 aa19.5■□□□□ 0.71
TUBB3-202ENST00000553656 ESCO1Q5FWF5 840 aa19.49■□□□□ 0.71
TUBB3-202ENST00000553656 BRINP3Q76B58 766 aa19.49■□□□□ 0.71
TUBB3-202ENST00000553656 EVC2Q86UK5 1308 aa19.49■□□□□ 0.71
TUBB3-202ENST00000553656 SBNO2Q9Y2G9 1366 aa19.48■□□□□ 0.71
TUBB3-202ENST00000553656 TULP4Q9NRJ4 1543 aa19.48■□□□□ 0.71
TUBB3-202ENST00000553656 SRPK2P78362 688 aaKnown RBP19.48■□□□□ 0.71
TUBB3-202ENST00000553656 CDK19Q9BWU1 502 aa19.48■□□□□ 0.71
TUBB3-202ENST00000553656 ST20-MTHFSA0A0A6YYL1 179 aa19.47■□□□□ 0.71
TUBB3-202ENST00000553656 SLC24A1O60721 1099 aa19.46■□□□□ 0.71
TUBB3-202ENST00000553656 ORAI2Q96SN7 254 aa19.45■□□□□ 0.7
TUBB3-202ENST00000553656 EIF4G2P78344 907 aaKnown RBP eCLIP19.44■□□□□ 0.7
TUBB3-202ENST00000553656 KIF1AQ12756 1690 aa19.43■□□□□ 0.7
TUBB3-202ENST00000553656 HSPA1LP34931 641 aa19.43■□□□□ 0.7
TUBB3-202ENST00000553656 NUDT16Q96DE0 195 aaKnown RBP19.43■□□□□ 0.7
TUBB3-202ENST00000553656 CABP2Q9NPB3 220 aa19.42■□□□□ 0.7
TUBB3-202ENST00000553656 PHF8Q9UPP1 1060 aa19.42■□□□□ 0.7
TUBB3-202ENST00000553656 USP32Q8NFA0 1604 aa19.42■□□□□ 0.7
TUBB3-202ENST00000553656 ITSN1Q15811 1721 aa19.42■□□□□ 0.7
TUBB3-202ENST00000553656 ATP7BP35670 1465 aa19.41■□□□□ 0.7
TUBB3-202ENST00000553656 AHDC1Q5TGY3 1603 aaPredicted RBP19.41■□□□□ 0.7
TUBB3-202ENST00000553656 PHLPP1O60346 1717 aa19.41■□□□□ 0.7
TUBB3-202ENST00000553656 NPHP3Q7Z494 1330 aa19.41■□□□□ 0.7
TUBB3-202ENST00000553656 PRR36Q9H6K5 1346 aa19.41■□□□□ 0.7
TUBB3-202ENST00000553656 RGPD8O14715 1765 aaPredicted RBP19.41■□□□□ 0.7
TUBB3-202ENST00000553656 ZEB1P37275 1124 aaPredicted RBP19.4■□□□□ 0.7
TUBB3-202ENST00000553656 CCDC61Q9Y6R9 512 aa19.4■□□□□ 0.7
TUBB3-202ENST00000553656 NHSL1Q5SYE7 1610 aa19.4■□□□□ 0.7
TUBB3-202ENST00000553656 TMF1P82094 1093 aa19.39■□□□□ 0.69
TUBB3-202ENST00000553656 TESK2Q96S53 571 aa19.39■□□□□ 0.69
TUBB3-202ENST00000553656 FOXO3O43524 673 aa19.38■□□□□ 0.69
TUBB3-202ENST00000553656 ATAD2Q6PL18 1390 aa19.38■□□□□ 0.69
TUBB3-202ENST00000553656 PMFBP1Q8TBY8 1022 aa19.38■□□□□ 0.69
TUBB3-202ENST00000553656 HSPA5P11021 654 aaKnown RBP19.37■□□□□ 0.69
TUBB3-202ENST00000553656 NGDNQ8NEJ9 315 aaKnown RBP19.37■□□□□ 0.69
TUBB3-202ENST00000553656 DDX17Q92841 729 aaKnown RBP19.37■□□□□ 0.69
TUBB3-202ENST00000553656 PPIP5K1Q6PFW1 1433 aa19.36■□□□□ 0.69
TUBB3-202ENST00000553656 CDCA8Q53HL2 280 aa19.36■□□□□ 0.69
TUBB3-202ENST00000553656 TOPAZ1Q8N9V7 1692 aa19.36■□□□□ 0.69
TUBB3-202ENST00000553656 PSME1Q06323 249 aa19.35■□□□□ 0.69
TUBB3-202ENST00000553656 COL16A1Q07092 1604 aaPredicted RBP19.35■□□□□ 0.69
TUBB3-202ENST00000553656 XPCQ01831 940 aaPredicted RBP19.33■□□□□ 0.68
TUBB3-202ENST00000553656 PUS7Q96PZ0 661 aaKnown RBP19.33■□□□□ 0.68
TUBB3-202ENST00000553656 SOS2Q07890 1332 aaPredicted RBP19.32■□□□□ 0.68
TUBB3-202ENST00000553656 PLEKHG3A1L390 1219 aa19.32■□□□□ 0.68
TUBB3-202ENST00000553656 KRT28Q7Z3Y7 464 aa19.32■□□□□ 0.68
TUBB3-202ENST00000553656 LRRC59Q96AG4 307 aaKnown RBP19.32■□□□□ 0.68
TUBB3-202ENST00000553656 DISP3Q9P2K9 1392 aa19.32■□□□□ 0.68
TUBB3-202ENST00000553656 PXDNQ92626 1479 aa19.31■□□□□ 0.68
TUBB3-202ENST00000553656 TMC1Q8TDI8 760 aa19.31■□□□□ 0.68
TUBB3-202ENST00000553656 CABP1Q9NZU7 370 aa19.31■□□□□ 0.68
TUBB3-202ENST00000553656 JCADQ9P266 1359 aa19.31■□□□□ 0.68
TUBB3-202ENST00000553656 ACEP12821 1306 aa19.3■□□□□ 0.68
TUBB3-202ENST00000553656 POLR3AO14802 1390 aaPredicted RBP19.29■□□□□ 0.68
TUBB3-202ENST00000553656 NINLQ9Y2I6 1382 aa19.29■□□□□ 0.68
TUBB3-202ENST00000553656 POLR3GLQ9BT43 218 aa19.27■□□□□ 0.68
TUBB3-202ENST00000553656 PAK3O75914 559 aaPredicted RBP19.26■□□□□ 0.67
TUBB3-202ENST00000553656 SBNO1A3KN83 1393 aa19.26■□□□□ 0.67
TUBB3-202ENST00000553656 LMOD2Q6P5Q4 547 aa19.25■□□□□ 0.67
TUBB3-202ENST00000553656 HDGFL2Q7Z4V5 671 aaPredicted RBP19.25■□□□□ 0.67
TUBB3-202ENST00000553656 TNS3Q68CZ2 1445 aa19.25■□□□□ 0.67
TUBB3-202ENST00000553656 SPATA31A3Q5VYP0 1347 aa19.25■□□□□ 0.67
TUBB3-202ENST00000553656 SHPRHQ149N8 1683 aa19.24■□□□□ 0.67
TUBB3-202ENST00000553656 ZNF692Q9BU19 519 aaPredicted RBP19.24■□□□□ 0.67
TUBB3-202ENST00000553656 TERF2IPQ9NYB0 399 aa19.24■□□□□ 0.67
TUBB3-202ENST00000553656 ARHGEF10O15013 1369 aa19.23■□□□□ 0.67
TUBB3-202ENST00000553656 PNPLA6Q8IY17 1366 aa19.23■□□□□ 0.67
TUBB3-202ENST00000553656 SLC12A5Q9H2X9 1139 aa19.23■□□□□ 0.67
TUBB3-202ENST00000553656 SPATA31A6Q5VVP1 1343 aa19.23■□□□□ 0.67
TUBB3-202ENST00000553656 BRD4O60885 1362 aaPredicted RBP19.22■□□□□ 0.67
TUBB3-202ENST00000553656 USP6P35125 1406 aa19.22■□□□□ 0.67
TUBB3-202ENST00000553656 KTN1Q86UP2 1357 aaKnown RBP19.21■□□□□ 0.67
TUBB3-202ENST00000553656 TRPM3Q9HCF6 1732 aaPredicted RBP19.21■□□□□ 0.67
TUBB3-202ENST00000553656 AKAP12Q02952 1782 aa19.2■□□□□ 0.66
TUBB3-202ENST00000553656 CPSF1Q10570 1443 aaKnown RBP19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms