RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 NBR1Q14596 966 aa6.94□□□□□ -1.3
TMEM55B-204ENST00000553602 ZFP91Q96JP5 570 aaPredicted RBP6.94□□□□□ -1.3
TMEM55B-204ENST00000553602 BCL11BQ9C0K0 894 aaPredicted RBP6.94□□□□□ -1.3
TMEM55B-204ENST00000553602 ZNF521Q96K83 1311 aa6.94□□□□□ -1.3
TMEM55B-204ENST00000553602 CLTCL1P53675 1640 aa6.94□□□□□ -1.3
TMEM55B-204ENST00000553602 NINLQ9Y2I6 1382 aa6.94□□□□□ -1.3
TMEM55B-204ENST00000553602 IFT172Q9UG01 1749 aa6.93□□□□□ -1.3
TMEM55B-204ENST00000553602 LMTK2Q8IWU2 1503 aa6.93□□□□□ -1.3
TMEM55B-204ENST00000553602 DEKP35659 375 aaKnown RBP6.93□□□□□ -1.3
TMEM55B-204ENST00000553602 BACH2Q9BYV9 841 aa6.93□□□□□ -1.3
TMEM55B-204ENST00000553602 SETBP1Q9Y6X0 1596 aa6.93□□□□□ -1.3
TMEM55B-204ENST00000553602 USP32Q8NFA0 1604 aa6.93□□□□□ -1.3
TMEM55B-204ENST00000553602 ZMYM3Q14202 1370 aa6.93□□□□□ -1.3
TMEM55B-204ENST00000553602 NRXN1Q9ULB1 1477 aa6.92□□□□□ -1.3
TMEM55B-204ENST00000553602 MAP3K4Q9Y6R4 1608 aa6.92□□□□□ -1.3
TMEM55B-204ENST00000553602 PAK3O75914 559 aaPredicted RBP6.92□□□□□ -1.3
TMEM55B-204ENST00000553602 TPRNQ4KMQ1 711 aa6.92□□□□□ -1.3
TMEM55B-204ENST00000553602 EXOC6Q8TAG9 804 aa6.92□□□□□ -1.3
TMEM55B-204ENST00000553602 DDRGK1Q96HY6 314 aa6.92□□□□□ -1.3
TMEM55B-204ENST00000553602 POLR3GLQ9BT43 218 aa6.92□□□□□ -1.3
TMEM55B-204ENST00000553602 ATP7AQ04656 1500 aa6.91□□□□□ -1.3
TMEM55B-204ENST00000553602 EFCAB6Q5THR3 1501 aa6.91□□□□□ -1.3
TMEM55B-204ENST00000553602 MROH1Q8NDA8 1641 aa6.91□□□□□ -1.3
TMEM55B-204ENST00000553602 PDE4AP27815 886 aa6.91□□□□□ -1.3
TMEM55B-204ENST00000553602 RTL5Q5HYW3 569 aaPredicted RBP6.91□□□□□ -1.3
TMEM55B-204ENST00000553602 ZNF467Q7Z7K2 595 aaPredicted RBP6.91□□□□□ -1.3
TMEM55B-204ENST00000553602 KDM2BQ8NHM5 1336 aa6.91□□□□□ -1.3
TMEM55B-204ENST00000553602 FANCAO15360 1455 aa6.91□□□□□ -1.3
TMEM55B-204ENST00000553602 ABCA6Q8N139 1617 aa6.9□□□□□ -1.3
TMEM55B-204ENST00000553602 VIRMAQ69YN4 1812 aaKnown RBP6.9□□□□□ -1.3
TMEM55B-204ENST00000553602 PPM1GO15355 546 aaPredicted RBP6.9□□□□□ -1.3
TMEM55B-204ENST00000553602 NBPF1Q3BBV0 1214 aa6.9□□□□□ -1.3
TMEM55B-204ENST00000553602 EFCAB2Q5VUJ9 269 aa6.9□□□□□ -1.3
TMEM55B-204ENST00000553602 CENPQQ7L2Z9 268 aaPredicted RBP6.9□□□□□ -1.3
TMEM55B-204ENST00000553602 CHADLQ6NUI6 762 aa6.89□□□□□ -1.31
TMEM55B-204ENST00000553602 TRMT2AQ8IZ69 625 aaKnown RBP6.89□□□□□ -1.31
TMEM55B-204ENST00000553602 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.89□□□□□ -1.31
TMEM55B-204ENST00000553602 TSPYL2Q9H2G4 693 aaPredicted RBP6.89□□□□□ -1.31
TMEM55B-204ENST00000553602 PANK3Q9H999 370 aa6.89□□□□□ -1.31
TMEM55B-204ENST00000553602 FARP1Q9Y4F1 1045 aaPredicted RBP6.89□□□□□ -1.31
TMEM55B-204ENST00000553602 TRAPPC8Q9Y2L5 1435 aa6.89□□□□□ -1.31
TMEM55B-204ENST00000553602 NKTRP30414 1462 aaKnown RBP6.89□□□□□ -1.31
TMEM55B-204ENST00000553602 ZC3H13Q5T200 1668 aaKnown RBP6.88□□□□□ -1.31
TMEM55B-204ENST00000553602 ERCC6L2Q5T890 1561 aa6.88□□□□□ -1.31
TMEM55B-204ENST00000553602 ADGRB3O60242 1522 aa6.88□□□□□ -1.31
TMEM55B-204ENST00000553602 KANK1Q14678 1352 aa6.88□□□□□ -1.31
TMEM55B-204ENST00000553602 PLEKHH1Q9ULM0 1364 aa6.88□□□□□ -1.31
TMEM55B-204ENST00000553602 PPP2R1AP30153 589 aa6.88□□□□□ -1.31
TMEM55B-204ENST00000553602 AAMPQ13685 434 aa6.88□□□□□ -1.31
TMEM55B-204ENST00000553602 DUSP27Q5VZP5 1158 aa6.88□□□□□ -1.31
TMEM55B-204ENST00000553602 CFAP74Q9C0B2 1584 aa6.87□□□□□ -1.31
TMEM55B-204ENST00000553602 ADGRL1O94910 1474 aa6.87□□□□□ -1.31
TMEM55B-204ENST00000553602 ERVK-7P63135 1459 aa6.87□□□□□ -1.31
TMEM55B-204ENST00000553602 KNSTRNQ9Y448 316 aa6.87□□□□□ -1.31
TMEM55B-204ENST00000553602 IQSEC2Q5JU85 1478 aa6.86□□□□□ -1.31
TMEM55B-204ENST00000553602 POLR3AO14802 1390 aaPredicted RBP6.86□□□□□ -1.31
TMEM55B-204ENST00000553602 SPAG9O60271 1321 aaKnown RBP6.86□□□□□ -1.31
TMEM55B-204ENST00000553602 KIF1BO60333 1816 aa6.86□□□□□ -1.31
TMEM55B-204ENST00000553602 GOLGA2Q08379 1002 aa6.86□□□□□ -1.31
TMEM55B-204ENST00000553602 PDAP1Q13442 181 aaKnown RBP6.86□□□□□ -1.31
TMEM55B-204ENST00000553602 WDR43Q15061 677 aaKnown RBP eCLIP6.86□□□□□ -1.31
TMEM55B-204ENST00000553602 PIP4P2Q8N4L2 257 aa6.86□□□□□ -1.31
TMEM55B-204ENST00000553602 CDCA7LQ96GN5 454 aa6.86□□□□□ -1.31
TMEM55B-204ENST00000553602 CRBNQ96SW2 442 aa6.86□□□□□ -1.31
TMEM55B-204ENST00000553602 SHPRHQ149N8 1683 aa6.85□□□□□ -1.31
TMEM55B-204ENST00000553602 PPRC1Q5VV67 1664 aaKnown RBP6.85□□□□□ -1.31
TMEM55B-204ENST00000553602 SLFN5Q08AF3 891 aa6.85□□□□□ -1.31
TMEM55B-204ENST00000553602 RGL3Q3MIN7 710 aa6.85□□□□□ -1.31
TMEM55B-204ENST00000553602 CC2D1BQ5T0F9 858 aaKnown RBP6.85□□□□□ -1.31
TMEM55B-204ENST00000553602 ADAMTS8Q9UP79 889 aa6.85□□□□□ -1.31
TMEM55B-204ENST00000553602 CGNL1Q0VF96 1302 aa6.84□□□□□ -1.31
TMEM55B-204ENST00000553602 E9PSI1 815 aa6.84□□□□□ -1.31
TMEM55B-204ENST00000553602 PRKAR2AP13861 404 aaKnown RBP6.84□□□□□ -1.31
TMEM55B-204ENST00000553602 PDE3AQ14432 1141 aa6.84□□□□□ -1.31
TMEM55B-204ENST00000553602 FAM161AQ3B820 660 aa6.84□□□□□ -1.31
TMEM55B-204ENST00000553602 PUS7Q96PZ0 661 aaKnown RBP6.84□□□□□ -1.31
TMEM55B-204ENST00000553602 MROH2AA6NES4 1674 aa6.84□□□□□ -1.32
TMEM55B-204ENST00000553602 NSD2O96028 1365 aa6.83□□□□□ -1.32
TMEM55B-204ENST00000553602 ADGRB1O14514 1584 aa6.83□□□□□ -1.32
TMEM55B-204ENST00000553602 ADGRB2O60241 1585 aa6.83□□□□□ -1.32
TMEM55B-204ENST00000553602 HECW2Q9P2P5 1572 aa6.83□□□□□ -1.32
TMEM55B-204ENST00000553602 MAPK8IP3Q9UPT6 1336 aa6.83□□□□□ -1.32
TMEM55B-204ENST00000553602 PPLO60437 1756 aa6.83□□□□□ -1.32
TMEM55B-204ENST00000553602 FXR2P51116 673 aaKnown RBP eCLIP6.83□□□□□ -1.32
TMEM55B-204ENST00000553602 ZNF518AQ6AHZ1 1483 aa6.83□□□□□ -1.32
TMEM55B-204ENST00000553602 KIDINS220Q9ULH0 1771 aa6.82□□□□□ -1.32
TMEM55B-204ENST00000553602 QRICH2Q9H0J4 1663 aa6.82□□□□□ -1.32
TMEM55B-204ENST00000553602 ZNF579Q8NAF0 562 aaKnown RBP6.82□□□□□ -1.32
TMEM55B-204ENST00000553602 CCDC61Q9Y6R9 512 aa6.82□□□□□ -1.32
TMEM55B-204ENST00000553602 PIK3C2BO00750 1634 aa6.82□□□□□ -1.32
TMEM55B-204ENST00000553602 MLH3Q9UHC1 1453 aa6.81□□□□□ -1.32
TMEM55B-204ENST00000553602 NEFMP07197 916 aa6.81□□□□□ -1.32
TMEM55B-204ENST00000553602 CNGB1Q14028 1251 aaPredicted RBP6.81□□□□□ -1.32
TMEM55B-204ENST00000553602 C8orf34Q49A92 452 aa6.81□□□□□ -1.32
TMEM55B-204ENST00000553602 PCDHB8Q9UN66 801 aa6.81□□□□□ -1.32
TMEM55B-204ENST00000553602 PCDHB13Q9Y5F0 798 aa6.81□□□□□ -1.32
TMEM55B-204ENST00000553602 RIMBP3CA6NJZ7 1639 aa6.8□□□□□ -1.32
TMEM55B-204ENST00000553602 RIMBP3BA6NNM3 1639 aa6.8□□□□□ -1.32
TMEM55B-204ENST00000553602 RIMBP3Q9UFD9 1639 aa6.8□□□□□ -1.32
TMEM55B-204ENST00000553602 PLIN1O60240 522 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms