RNA–Protein interactions for RNA: ENST00000553599.5

PSEN1-207, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 591 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-207ENST00000553599 ADGRB2O60241 1585 aa27.17■■□□□ 1.94
PSEN1-207ENST00000553599 HSPA5P11021 654 aaKnown RBP27.16■■□□□ 1.94
PSEN1-207ENST00000553599 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.16■■□□□ 1.94
PSEN1-207ENST00000553599 IQSEC2Q5JU85 1478 aa27.15■■□□□ 1.94
PSEN1-207ENST00000553599 SAFB2Q14151 953 aaKnown RBP eCLIP27.15■■□□□ 1.94
PSEN1-207ENST00000553599 C14orf37Q86TY3 774 aa27.15■■□□□ 1.94
PSEN1-207ENST00000553599 C19orf44Q9H6X5 657 aa27.15■■□□□ 1.94
PSEN1-207ENST00000553599 XIRP1Q702N8 1843 aaKnown RBP27.15■■□□□ 1.94
PSEN1-207ENST00000553599 DCCP43146 1447 aa27.14■■□□□ 1.93
PSEN1-207ENST00000553599 NALCNQ8IZF0 1738 aa27.13■■□□□ 1.93
PSEN1-207ENST00000553599 MSH6P52701 1360 aa27.13■■□□□ 1.93
PSEN1-207ENST00000553599 TESK2Q96S53 571 aa27.13■■□□□ 1.93
PSEN1-207ENST00000553599 CDC42BPGQ6DT37 1551 aa27.12■■□□□ 1.93
PSEN1-207ENST00000553599 MINK1Q8N4C8 1332 aaPredicted RBP27.12■■□□□ 1.93
PSEN1-207ENST00000553599 RBM33Q96EV2 1170 aaKnown RBP27.11■■□□□ 1.93
PSEN1-207ENST00000553599 EVC2Q86UK5 1308 aa27.09■■□□□ 1.93
PSEN1-207ENST00000553599 WASLO00401 505 aaPredicted RBP27.07■■□□□ 1.92
PSEN1-207ENST00000553599 TMF1P82094 1093 aa27.07■■□□□ 1.92
PSEN1-207ENST00000553599 CADPS2Q86UW7 1296 aa27.07■■□□□ 1.92
PSEN1-207ENST00000553599 HIRIP3Q9BW71 556 aaPredicted RBP27.06■■□□□ 1.92
PSEN1-207ENST00000553599 ATF3P18847 181 aa27.05■■□□□ 1.92
PSEN1-207ENST00000553599 CERKQ8TCT0 537 aa27.05■■□□□ 1.92
PSEN1-207ENST00000553599 PUS7Q96PZ0 661 aaKnown RBP27.05■■□□□ 1.92
PSEN1-207ENST00000553599 CDCA8Q53HL2 280 aa27.04■■□□□ 1.92
PSEN1-207ENST00000553599 TULP4Q9NRJ4 1543 aa27.04■■□□□ 1.92
PSEN1-207ENST00000553599 CDK19Q9BWU1 502 aa27.02■■□□□ 1.92
PSEN1-207ENST00000553599 FMN2Q9NZ56 1722 aa27.02■■□□□ 1.92
PSEN1-207ENST00000553599 ANKARQ7Z5J8 1434 aa27■■□□□ 1.91
PSEN1-207ENST00000553599 SRPK2P78362 688 aaKnown RBP26.98■■□□□ 1.91
PSEN1-207ENST00000553599 DISP3Q9P2K9 1392 aa26.97■■□□□ 1.91
PSEN1-207ENST00000553599 ATAD2Q6PL18 1390 aa26.97■■□□□ 1.91
PSEN1-207ENST00000553599 MST1RQ04912 1400 aa26.96■■□□□ 1.91
PSEN1-207ENST00000553599 TOM1O60784 492 aa26.94■■□□□ 1.9
PSEN1-207ENST00000553599 CABP2Q9NPB3 220 aa26.93■■□□□ 1.9
PSEN1-207ENST00000553599 ATP7BP35670 1465 aa26.93■■□□□ 1.9
PSEN1-207ENST00000553599 NUDT16Q96DE0 195 aaKnown RBP26.92■■□□□ 1.9
PSEN1-207ENST00000553599 SLAIN2Q9P270 581 aa26.92■■□□□ 1.9
PSEN1-207ENST00000553599 C1orf167Q5SNV9 1468 aa26.92■■□□□ 1.9
PSEN1-207ENST00000553599 CCDC61Q9Y6R9 512 aa26.91■■□□□ 1.9
PSEN1-207ENST00000553599 USP32Q8NFA0 1604 aa26.9■■□□□ 1.9
PSEN1-207ENST00000553599 ITSN1Q15811 1721 aa26.9■■□□□ 1.9
PSEN1-207ENST00000553599 PRR36Q9H6K5 1346 aa26.9■■□□□ 1.9
PSEN1-207ENST00000553599 NINLQ9Y2I6 1382 aa26.89■■□□□ 1.9
PSEN1-207ENST00000553599 TOPAZ1Q8N9V7 1692 aa26.87■■□□□ 1.89
PSEN1-207ENST00000553599 NUTM2FA1L443 756 aa26.86■■□□□ 1.89
PSEN1-207ENST00000553599 C11orf95C9JLR9 678 aaPredicted RBP26.86■■□□□ 1.89
PSEN1-207ENST00000553599 KIF7Q2M1P5 1343 aa26.86■■□□□ 1.89
PSEN1-207ENST00000553599 UBAP1LF5GYI3 381 aa26.85■■□□□ 1.89
PSEN1-207ENST00000553599 CCDC7Q96M83 1385 aa26.84■■□□□ 1.89
PSEN1-207ENST00000553599 PPIP5K1Q6PFW1 1433 aa26.84■■□□□ 1.89
PSEN1-207ENST00000553599 PLEKHG3A1L390 1219 aa26.84■■□□□ 1.89
PSEN1-207ENST00000553599 RGPD8O14715 1765 aaPredicted RBP26.84■■□□□ 1.89
PSEN1-207ENST00000553599 KIF1AQ12756 1690 aa26.83■■□□□ 1.89
PSEN1-207ENST00000553599 ESCO1Q5FWF5 840 aa26.83■■□□□ 1.89
PSEN1-207ENST00000553599 ZNF316A6NFI3 1004 aaPredicted RBP26.82■■□□□ 1.88
PSEN1-207ENST00000553599 PHF8Q9UPP1 1060 aa26.82■■□□□ 1.88
PSEN1-207ENST00000553599 WASHC2AQ641Q2 1341 aa26.82■■□□□ 1.88
PSEN1-207ENST00000553599 CABP1Q9NZU7 370 aa26.8■■□□□ 1.88
PSEN1-207ENST00000553599 BRINP3Q76B58 766 aa26.79■■□□□ 1.88
PSEN1-207ENST00000553599 ORAI2Q96SN7 254 aa26.79■■□□□ 1.88
PSEN1-207ENST00000553599 TMC1Q8TDI8 760 aa26.78■■□□□ 1.88
PSEN1-207ENST00000553599 POLR3GLQ9BT43 218 aa26.78■■□□□ 1.88
PSEN1-207ENST00000553599 POLR3AO14802 1390 aaPredicted RBP26.78■■□□□ 1.88
PSEN1-207ENST00000553599 MYOM1P52179 1685 aa26.76■■□□□ 1.87
PSEN1-207ENST00000553599 TERF2IPQ9NYB0 399 aa26.76■■□□□ 1.87
PSEN1-207ENST00000553599 ROBO1Q9Y6N7 1651 aa26.76■■□□□ 1.87
PSEN1-207ENST00000553599 NGDNQ8NEJ9 315 aaKnown RBP26.75■■□□□ 1.87
PSEN1-207ENST00000553599 ZNF692Q9BU19 519 aaPredicted RBP26.75■■□□□ 1.87
PSEN1-207ENST00000553599 SLC12A5Q9H2X9 1139 aa26.75■■□□□ 1.87
PSEN1-207ENST00000553599 ACEP12821 1306 aa26.73■■□□□ 1.87
PSEN1-207ENST00000553599 NPHP3Q7Z494 1330 aa26.73■■□□□ 1.87
PSEN1-207ENST00000553599 HDGFL2Q7Z4V5 671 aaPredicted RBP26.73■■□□□ 1.87
PSEN1-207ENST00000553599 PMFBP1Q8TBY8 1022 aa26.73■■□□□ 1.87
PSEN1-207ENST00000553599 CPSF1Q10570 1443 aaKnown RBP26.73■■□□□ 1.87
PSEN1-207ENST00000553599 ANKRD36BQ8N2N9 1353 aa26.72■■□□□ 1.87
PSEN1-207ENST00000553599 BRD4O60885 1362 aaPredicted RBP26.71■■□□□ 1.87
PSEN1-207ENST00000553599 CD163L1Q9NR16 1453 aa26.7■■□□□ 1.87
PSEN1-207ENST00000553599 PIP4K2BP78356 416 aa26.7■■□□□ 1.86
PSEN1-207ENST00000553599 NHSL1Q5SYE7 1610 aa26.69■■□□□ 1.86
PSEN1-207ENST00000553599 AKAP12Q02952 1782 aa26.69■■□□□ 1.86
PSEN1-207ENST00000553599 FOXO3O43524 673 aa26.69■■□□□ 1.86
PSEN1-207ENST00000553599 AHDC1Q5TGY3 1603 aaPredicted RBP26.68■■□□□ 1.86
PSEN1-207ENST00000553599 PSME1Q06323 249 aa26.68■■□□□ 1.86
PSEN1-207ENST00000553599 A0A1W2PP64 1363 aa26.68■■□□□ 1.86
PSEN1-207ENST00000553599 SCAF1Q9H7N4 1312 aaKnown RBP26.67■■□□□ 1.86
PSEN1-207ENST00000553599 KTN1Q86UP2 1357 aaKnown RBP26.67■■□□□ 1.86
PSEN1-207ENST00000553599 USP6P35125 1406 aa26.65■■□□□ 1.86
PSEN1-207ENST00000553599 MON2Q7Z3U7 1717 aa26.65■■□□□ 1.86
PSEN1-207ENST00000553599 PANK3Q9H999 370 aa26.64■■□□□ 1.86
PSEN1-207ENST00000553599 SOS2Q07890 1332 aaPredicted RBP26.64■■□□□ 1.85
PSEN1-207ENST00000553599 PXDNQ92626 1479 aa26.63■■□□□ 1.85
PSEN1-207ENST00000553599 KRT28Q7Z3Y7 464 aa26.63■■□□□ 1.85
PSEN1-207ENST00000553599 EDC4Q6P2E9 1401 aaKnown RBP26.63■■□□□ 1.85
PSEN1-207ENST00000553599 SBNO1A3KN83 1393 aa26.62■■□□□ 1.85
PSEN1-207ENST00000553599 SSH2Q76I76 1423 aa26.61■■□□□ 1.85
PSEN1-207ENST00000553599 FBXO41Q8TF61 875 aa26.6■■□□□ 1.85
PSEN1-207ENST00000553599 TTC21AQ8NDW8 1320 aa26.59■■□□□ 1.85
PSEN1-207ENST00000553599 NRKQ7Z2Y5 1582 aa26.58■■□□□ 1.85
PSEN1-207ENST00000553599 PHLPP1O60346 1717 aa26.58■■□□□ 1.85
PSEN1-207ENST00000553599 TRPM3Q9HCF6 1732 aaPredicted RBP26.58■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms