RNA–Protein interactions for RNA: ENST00000553427.5

CPSF2-202, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 715 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-202ENST00000553427 C1orf167Q5SNV9 1468 aa26.57■■□□□ 1.84
CPSF2-202ENST00000553427 AHDC1Q5TGY3 1603 aaPredicted RBP26.57■■□□□ 1.84
CPSF2-202ENST00000553427 PRAM1Q96QH2 718 aa26.56■■□□□ 1.84
CPSF2-202ENST00000553427 TONSLQ96HA7 1378 aa26.56■■□□□ 1.84
CPSF2-202ENST00000553427 BRINP3Q76B58 766 aa26.55■■□□□ 1.84
CPSF2-202ENST00000553427 ADGRB2O60241 1585 aa26.54■■□□□ 1.84
CPSF2-202ENST00000553427 TRAK1Q9UPV9 953 aa26.54■■□□□ 1.84
CPSF2-202ENST00000553427 ARHGEF28Q8N1W1 1705 aaKnown RBP26.53■■□□□ 1.84
CPSF2-202ENST00000553427 TRPM1Q7Z4N2 1603 aa26.53■■□□□ 1.84
CPSF2-202ENST00000553427 NBPF1Q3BBV0 1214 aa26.51■■□□□ 1.83
CPSF2-202ENST00000553427 POGKQ9P215 609 aa26.51■■□□□ 1.83
CPSF2-202ENST00000553427 PHLPP1O60346 1717 aa26.5■■□□□ 1.83
CPSF2-202ENST00000553427 FMN2Q9NZ56 1722 aa26.5■■□□□ 1.83
CPSF2-202ENST00000553427 COL16A1Q07092 1604 aaPredicted RBP26.49■■□□□ 1.83
CPSF2-202ENST00000553427 NHSL1Q5SYE7 1610 aa26.49■■□□□ 1.83
CPSF2-202ENST00000553427 GPRASP1Q5JY77 1395 aa26.46■■□□□ 1.83
CPSF2-202ENST00000553427 SAFB2Q14151 953 aaKnown RBP eCLIP26.44■■□□□ 1.82
CPSF2-202ENST00000553427 ANKARQ7Z5J8 1434 aa26.43■■□□□ 1.82
CPSF2-202ENST00000553427 NBPF8Q3BBV2 869 aa26.43■■□□□ 1.82
CPSF2-202ENST00000553427 ROCK2O75116 1388 aaKnown RBP26.43■■□□□ 1.82
CPSF2-202ENST00000553427 RALGAPBQ86X10 1494 aa26.42■■□□□ 1.82
CPSF2-202ENST00000553427 EIF3AQ14152 1382 aaKnown RBP26.42■■□□□ 1.82
CPSF2-202ENST00000553427 ORAI2Q96SN7 254 aa26.41■■□□□ 1.82
CPSF2-202ENST00000553427 TIMELESSQ9UNS1 1208 aa26.41■■□□□ 1.82
CPSF2-202ENST00000553427 JCADQ9P266 1359 aa26.4■■□□□ 1.82
CPSF2-202ENST00000553427 MINK1Q8N4C8 1332 aaPredicted RBP26.39■■□□□ 1.81
CPSF2-202ENST00000553427 KIF1AQ12756 1690 aa26.38■■□□□ 1.81
CPSF2-202ENST00000553427 TULP4Q9NRJ4 1543 aa26.38■■□□□ 1.81
CPSF2-202ENST00000553427 MED1Q15648 1581 aaPredicted RBP26.37■■□□□ 1.81
CPSF2-202ENST00000553427 WASLO00401 505 aaPredicted RBP26.36■■□□□ 1.81
CPSF2-202ENST00000553427 ESCO1Q5FWF5 840 aa26.36■■□□□ 1.81
CPSF2-202ENST00000553427 CENPJQ9HC77 1338 aaPredicted RBP26.36■■□□□ 1.81
CPSF2-202ENST00000553427 USP32Q8NFA0 1604 aa26.35■■□□□ 1.81
CPSF2-202ENST00000553427 SOS2Q07890 1332 aaPredicted RBP26.35■■□□□ 1.81
CPSF2-202ENST00000553427 SHPRHQ149N8 1683 aa26.34■■□□□ 1.81
CPSF2-202ENST00000553427 HIRIP3Q9BW71 556 aaPredicted RBP26.34■■□□□ 1.81
CPSF2-202ENST00000553427 NPHP3Q7Z494 1330 aa26.34■■□□□ 1.81
CPSF2-202ENST00000553427 NUTM2FA1L443 756 aa26.33■■□□□ 1.81
CPSF2-202ENST00000553427 CCER1Q8TC90 406 aaPredicted RBP26.33■■□□□ 1.81
CPSF2-202ENST00000553427 PXDNQ92626 1479 aa26.31■■□□□ 1.8
CPSF2-202ENST00000553427 DDX17Q92841 729 aaKnown RBP26.31■■□□□ 1.8
CPSF2-202ENST00000553427 LRRC59Q96AG4 307 aaKnown RBP26.31■■□□□ 1.8
CPSF2-202ENST00000553427 QRICH2Q9H0J4 1663 aa26.31■■□□□ 1.8
CPSF2-202ENST00000553427 ATP7BP35670 1465 aa26.3■■□□□ 1.8
CPSF2-202ENST00000553427 SPATA31A6Q5VVP1 1343 aa26.29■■□□□ 1.8
CPSF2-202ENST00000553427 PRR36Q9H6K5 1346 aa26.29■■□□□ 1.8
CPSF2-202ENST00000553427 RGPD8O14715 1765 aaPredicted RBP26.28■■□□□ 1.8
CPSF2-202ENST00000553427 CARD11Q9BXL7 1154 aa26.28■■□□□ 1.8
CPSF2-202ENST00000553427 PHF8Q9UPP1 1060 aa26.28■■□□□ 1.8
CPSF2-202ENST00000553427 SBNO2Q9Y2G9 1366 aa26.26■■□□□ 1.79
CPSF2-202ENST00000553427 PNPLA6Q8IY17 1366 aa26.25■■□□□ 1.79
CPSF2-202ENST00000553427 DISP3Q9P2K9 1392 aa26.25■■□□□ 1.79
CPSF2-202ENST00000553427 FOXO3O43524 673 aa26.25■■□□□ 1.79
CPSF2-202ENST00000553427 CDK19Q9BWU1 502 aa26.24■■□□□ 1.79
CPSF2-202ENST00000553427 ITSN1Q15811 1721 aa26.24■■□□□ 1.79
CPSF2-202ENST00000553427 TOPAZ1Q8N9V7 1692 aa26.22■■□□□ 1.79
CPSF2-202ENST00000553427 NUDT16Q96DE0 195 aaKnown RBP26.21■■□□□ 1.79
CPSF2-202ENST00000553427 COL22A1Q8NFW1 1626 aaPredicted RBP26.2■■□□□ 1.78
CPSF2-202ENST00000553427 LRP6O75581 1613 aa26.19■■□□□ 1.78
CPSF2-202ENST00000553427 SBNO1A3KN83 1393 aa26.19■■□□□ 1.78
CPSF2-202ENST00000553427 CCDC61Q9Y6R9 512 aa26.18■■□□□ 1.78
CPSF2-202ENST00000553427 EVC2Q86UK5 1308 aa26.17■■□□□ 1.78
CPSF2-202ENST00000553427 KRT28Q7Z3Y7 464 aa26.16■■□□□ 1.78
CPSF2-202ENST00000553427 SPATA31A3Q5VYP0 1347 aa26.15■■□□□ 1.78
CPSF2-202ENST00000553427 TNS3Q68CZ2 1445 aa26.15■■□□□ 1.78
CPSF2-202ENST00000553427 XPCQ01831 940 aaPredicted RBP26.15■■□□□ 1.78
CPSF2-202ENST00000553427 PSME1Q06323 249 aa26.15■■□□□ 1.78
CPSF2-202ENST00000553427 PMFBP1Q8TBY8 1022 aa26.15■■□□□ 1.78
CPSF2-202ENST00000553427 SRPK2P78362 688 aaKnown RBP26.14■■□□□ 1.78
CPSF2-202ENST00000553427 POLR3AO14802 1390 aaPredicted RBP26.14■■□□□ 1.78
CPSF2-202ENST00000553427 PLEKHG3A1L390 1219 aa26.13■■□□□ 1.77
CPSF2-202ENST00000553427 TRPM3Q9HCF6 1732 aaPredicted RBP26.12■■□□□ 1.77
CPSF2-202ENST00000553427 PHF23Q9BUL5 403 aaPredicted RBP26.11■■□□□ 1.77
CPSF2-202ENST00000553427 CABP2Q9NPB3 220 aa26.11■■□□□ 1.77
CPSF2-202ENST00000553427 NGDNQ8NEJ9 315 aaKnown RBP26.1■■□□□ 1.77
CPSF2-202ENST00000553427 PPIP5K1Q6PFW1 1433 aa26.1■■□□□ 1.77
CPSF2-202ENST00000553427 ARHGEF10O15013 1369 aa26.09■■□□□ 1.77
CPSF2-202ENST00000553427 USP47Q96K76 1375 aa26.09■■□□□ 1.77
CPSF2-202ENST00000553427 ATAD2Q6PL18 1390 aa26.08■■□□□ 1.77
CPSF2-202ENST00000553427 SLC24A1O60721 1099 aa26.07■■□□□ 1.76
CPSF2-202ENST00000553427 TESK2Q96S53 571 aa26.06■■□□□ 1.76
CPSF2-202ENST00000553427 ACEP12821 1306 aa26.06■■□□□ 1.76
CPSF2-202ENST00000553427 ALS2Q96Q42 1657 aa26.06■■□□□ 1.76
CPSF2-202ENST00000553427 ST20-MTHFSA0A0A6YYL1 179 aa26.05■■□□□ 1.76
CPSF2-202ENST00000553427 NUTM2BA6NNL0 878 aaPredicted RBP26.05■■□□□ 1.76
CPSF2-202ENST00000553427 NUTM2EB1AL46 878 aaPredicted RBP26.05■■□□□ 1.76
CPSF2-202ENST00000553427 NUTM2AQ8IVF1 878 aaPredicted RBP26.05■■□□□ 1.76
CPSF2-202ENST00000553427 MEX3CQ5U5Q3 659 aaKnown RBP26.04■■□□□ 1.76
CPSF2-202ENST00000553427 PUS7Q96PZ0 661 aaKnown RBP26.04■■□□□ 1.76
CPSF2-202ENST00000553427 RGS17Q9UGC6 210 aaPredicted RBP26.04■■□□□ 1.76
CPSF2-202ENST00000553427 BRD4O60885 1362 aaPredicted RBP26.04■■□□□ 1.76
CPSF2-202ENST00000553427 CABP1Q9NZU7 370 aa26■■□□□ 1.75
CPSF2-202ENST00000553427 USP6P35125 1406 aa25.97■■□□□ 1.75
CPSF2-202ENST00000553427 ABCA3Q99758 1704 aa25.97■■□□□ 1.75
CPSF2-202ENST00000553427 MARF1Q9Y4F3 1742 aaKnown RBP25.95■■□□□ 1.74
CPSF2-202ENST00000553427 ADAMTS2O95450 1211 aa25.95■■□□□ 1.74
CPSF2-202ENST00000553427 ZNF772Q68DY9 489 aaPredicted RBP25.95■■□□□ 1.74
CPSF2-202ENST00000553427 CPSF1Q10570 1443 aaKnown RBP25.95■■□□□ 1.74
CPSF2-202ENST00000553427 SSH2Q76I76 1423 aa25.95■■□□□ 1.74
CPSF2-202ENST00000553427 LMOD2Q6P5Q4 547 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms