RNA–Protein interactions for RNA: ENST00000553391.2

MTHFD1-203, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-203ENST00000553391 WAPLQ7Z5K2 1190 aa12.55□□□□□ -0.4
MTHFD1-203ENST00000553391 MORC1Q86VD1 984 aa12.55□□□□□ -0.4
MTHFD1-203ENST00000553391 TULP4Q9NRJ4 1543 aa12.55□□□□□ -0.4
MTHFD1-203ENST00000553391 MINK1Q8N4C8 1332 aaPredicted RBP12.55□□□□□ -0.4
MTHFD1-203ENST00000553391 DLC1Q96QB1 1528 aa12.54□□□□□ -0.4
MTHFD1-203ENST00000553391 RNF123Q5XPI4 1314 aa12.54□□□□□ -0.4
MTHFD1-203ENST00000553391 QRICH2Q9H0J4 1663 aa12.54□□□□□ -0.4
MTHFD1-203ENST00000553391 ANKRD36BQ8N2N9 1353 aa12.54□□□□□ -0.4
MTHFD1-203ENST00000553391 NINLQ9Y2I6 1382 aa12.54□□□□□ -0.4
MTHFD1-203ENST00000553391 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
MTHFD1-203ENST00000553391 LTKP29376 864 aa12.53□□□□□ -0.4
MTHFD1-203ENST00000553391 SRPK2P78362 688 aaKnown RBP12.53□□□□□ -0.4
MTHFD1-203ENST00000553391 ARHGEF28Q8N1W1 1705 aaKnown RBP12.53□□□□□ -0.4
MTHFD1-203ENST00000553391 METP08581 1390 aa12.53□□□□□ -0.4
MTHFD1-203ENST00000553391 ATAD2Q6PL18 1390 aa12.53□□□□□ -0.4
MTHFD1-203ENST00000553391 NSD3Q9BZ95 1437 aa12.53□□□□□ -0.4
MTHFD1-203ENST00000553391 TXNDC2Q86VQ3 553 aa12.52□□□□□ -0.41
MTHFD1-203ENST00000553391 CGNL1Q0VF96 1302 aa12.52□□□□□ -0.41
MTHFD1-203ENST00000553391 POLR3AO14802 1390 aaPredicted RBP12.52□□□□□ -0.41
MTHFD1-203ENST00000553391 NLRP1Q9C000 1473 aa12.52□□□□□ -0.41
MTHFD1-203ENST00000553391 SENP3-EIF4A1A0A087X0R7 540 aa12.51□□□□□ -0.41
MTHFD1-203ENST00000553391 WDR43Q15061 677 aaKnown RBP eCLIP12.51□□□□□ -0.41
MTHFD1-203ENST00000553391 TERF2IPQ9NYB0 399 aa12.51□□□□□ -0.41
MTHFD1-203ENST00000553391 PLEKHH1Q9ULM0 1364 aa12.51□□□□□ -0.41
MTHFD1-203ENST00000553391 WASLO00401 505 aaPredicted RBP12.5□□□□□ -0.41
MTHFD1-203ENST00000553391 THEMISQ8N1K5 641 aaPredicted RBP12.5□□□□□ -0.41
MTHFD1-203ENST00000553391 CABP1Q9NZU7 370 aa12.5□□□□□ -0.41
MTHFD1-203ENST00000553391 TBX22Q9Y458 520 aa12.5□□□□□ -0.41
MTHFD1-203ENST00000553391 FAM135BQ49AJ0 1406 aa12.49□□□□□ -0.41
MTHFD1-203ENST00000553391 ADAMTS13Q76LX8 1427 aa12.49□□□□□ -0.41
MTHFD1-203ENST00000553391 NSD2O96028 1365 aa12.49□□□□□ -0.41
MTHFD1-203ENST00000553391 PLEKHG1Q9ULL1 1385 aa12.49□□□□□ -0.41
MTHFD1-203ENST00000553391 TECPR2O15040 1411 aa12.48□□□□□ -0.41
MTHFD1-203ENST00000553391 FYB1O15117 783 aa12.48□□□□□ -0.41
MTHFD1-203ENST00000553391 BCANQ96GW7 911 aa12.48□□□□□ -0.41
MTHFD1-203ENST00000553391 SALL2Q9Y467 1007 aaPredicted RBP12.48□□□□□ -0.41
MTHFD1-203ENST00000553391 EID1Q9Y6B2 187 aa12.48□□□□□ -0.41
MTHFD1-203ENST00000553391 MED14O60244 1454 aa12.47□□□□□ -0.41
MTHFD1-203ENST00000553391 MTHFSP49914 203 aa12.47□□□□□ -0.41
MTHFD1-203ENST00000553391 HDGFL2Q7Z4V5 671 aaPredicted RBP12.47□□□□□ -0.41
MTHFD1-203ENST00000553391 NGEFQ8N5V2 710 aa12.47□□□□□ -0.41
MTHFD1-203ENST00000553391 CDCA7LQ96GN5 454 aa12.47□□□□□ -0.41
MTHFD1-203ENST00000553391 NRXN3Q9Y4C0 1643 aa12.47□□□□□ -0.41
MTHFD1-203ENST00000553391 CD163L1Q9NR16 1453 aa12.46□□□□□ -0.41
MTHFD1-203ENST00000553391 ARHGAP23Q9P227 1491 aa12.46□□□□□ -0.41
MTHFD1-203ENST00000553391 A0A1W2PP64 1363 aa12.46□□□□□ -0.41
MTHFD1-203ENST00000553391 SETD1AO15047 1707 aaKnown RBP12.46□□□□□ -0.41
MTHFD1-203ENST00000553391 ZNF521Q96K83 1311 aa12.46□□□□□ -0.41
MTHFD1-203ENST00000553391 PPP4R2Q9NY27 417 aa12.46□□□□□ -0.41
MTHFD1-203ENST00000553391 IRX6P78412 446 aaPredicted RBP12.45□□□□□ -0.42
MTHFD1-203ENST00000553391 TRMT2AQ8IZ69 625 aaKnown RBP12.45□□□□□ -0.42
MTHFD1-203ENST00000553391 NUDT16Q96DE0 195 aaKnown RBP12.45□□□□□ -0.42
MTHFD1-203ENST00000553391 UBR1Q8IWV7 1749 aa12.45□□□□□ -0.42
MTHFD1-203ENST00000553391 USP32Q8NFA0 1604 aa12.44□□□□□ -0.42
MTHFD1-203ENST00000553391 NCBP3Q53F19 620 aaKnown RBP12.44□□□□□ -0.42
MTHFD1-203ENST00000553391 SLIT1O75093 1534 aa12.43□□□□□ -0.42
MTHFD1-203ENST00000553391 APAF1O14727 1248 aa12.43□□□□□ -0.42
MTHFD1-203ENST00000553391 TNNT2P45379 298 aaPredicted RBP12.43□□□□□ -0.42
MTHFD1-203ENST00000553391 CFAP53Q96M91 514 aa12.43□□□□□ -0.42
MTHFD1-203ENST00000553391 GGNBP2Q9H3C7 697 aa12.43□□□□□ -0.42
MTHFD1-203ENST00000553391 CCDC61Q9Y6R9 512 aa12.43□□□□□ -0.42
MTHFD1-203ENST00000553391 ROBO2Q9HCK4 1378 aa12.43□□□□□ -0.42
MTHFD1-203ENST00000553391 SLFN5Q08AF3 891 aa12.42□□□□□ -0.42
MTHFD1-203ENST00000553391 PELP1Q8IZL8 1130 aaKnown RBP12.42□□□□□ -0.42
MTHFD1-203ENST00000553391 SLC26A8Q96RN1 970 aa12.42□□□□□ -0.42
MTHFD1-203ENST00000553391 ZNF692Q9BU19 519 aaPredicted RBP12.42□□□□□ -0.42
MTHFD1-203ENST00000553391 RCAN3Q9UKA8 241 aa12.42□□□□□ -0.42
MTHFD1-203ENST00000553391 AMOTL2Q9Y2J4 779 aa12.42□□□□□ -0.42
MTHFD1-203ENST00000553391 GOLGA2Q08379 1002 aa12.41□□□□□ -0.42
MTHFD1-203ENST00000553391 CPSF1Q10570 1443 aaKnown RBP12.41□□□□□ -0.42
MTHFD1-203ENST00000553391 PLPPR3Q6T4P5 718 aa12.41□□□□□ -0.42
MTHFD1-203ENST00000553391 CCDC146Q8IYE0 955 aa12.41□□□□□ -0.42
MTHFD1-203ENST00000553391 PTPRUQ92729 1446 aa12.41□□□□□ -0.42
MTHFD1-203ENST00000553391 C3P01024 1663 aa12.41□□□□□ -0.42
MTHFD1-203ENST00000553391 PLEKHG3A1L390 1219 aa12.4□□□□□ -0.42
MTHFD1-203ENST00000553391 DUSP27Q5VZP5 1158 aa12.4□□□□□ -0.42
MTHFD1-203ENST00000553391 RUNDC1Q96C34 613 aa12.4□□□□□ -0.42
MTHFD1-203ENST00000553391 PRR36Q9H6K5 1346 aa12.38□□□□□ -0.43
MTHFD1-203ENST00000553391 ATP7BP35670 1465 aa12.38□□□□□ -0.43
MTHFD1-203ENST00000553391 CPS1P31327 1500 aa12.37□□□□□ -0.43
MTHFD1-203ENST00000553391 RRP1P56182 461 aaKnown RBP12.37□□□□□ -0.43
MTHFD1-203ENST00000553391 PNPLA6Q8IY17 1366 aa12.37□□□□□ -0.43
MTHFD1-203ENST00000553391 NCKAP5LQ9HCH0 1330 aa12.37□□□□□ -0.43
MTHFD1-203ENST00000553391 CCDC27Q2M243 656 aa12.36□□□□□ -0.43
MTHFD1-203ENST00000553391 ANKLE2Q86XL3 938 aa12.36□□□□□ -0.43
MTHFD1-203ENST00000553391 TCP11L2Q8N4U5 519 aa12.36□□□□□ -0.43
MTHFD1-203ENST00000553391 POLKQ9UBT6 870 aa12.36□□□□□ -0.43
MTHFD1-203ENST00000553391 KNDC1Q76NI1 1749 aa12.36□□□□□ -0.43
MTHFD1-203ENST00000553391 PPIP5K1Q6PFW1 1433 aa12.36□□□□□ -0.43
MTHFD1-203ENST00000553391 PIK3R4Q99570 1358 aa12.35□□□□□ -0.43
MTHFD1-203ENST00000553391 E9PSI1 815 aa12.35□□□□□ -0.43
MTHFD1-203ENST00000553391 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.35□□□□□ -0.43
MTHFD1-203ENST00000553391 WWC1Q8IX03 1113 aa12.35□□□□□ -0.43
MTHFD1-203ENST00000553391 SPINK5Q9NQ38 1064 aaPredicted RBP12.35□□□□□ -0.43
MTHFD1-203ENST00000553391 FER1L4A9Z1Z3 1794 aa12.35□□□□□ -0.43
MTHFD1-203ENST00000553391 U2AF1L5P0DN76 240 aaPredicted RBP12.34□□□□□ -0.43
MTHFD1-203ENST00000553391 U2AF1Q01081 240 aaKnown RBP eCLIP12.34□□□□□ -0.43
MTHFD1-203ENST00000553391 WDR63Q8IWG1 891 aa12.34□□□□□ -0.43
MTHFD1-203ENST00000553391 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
MTHFD1-203ENST00000553391 EDC4Q6P2E9 1401 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms