RNA–Protein interactions for RNA: ENST00000553384.5

RDH11-203, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best) BASIC

Gene RDH11, Length 1,926 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-203ENST00000553384 PTCH1Q13635 1447 aa10.46□□□□□ -0.74
RDH11-203ENST00000553384 ADAMTS2O95450 1211 aa10.45□□□□□ -0.74
RDH11-203ENST00000553384 NRXN3Q9Y4C0 1643 aa10.45□□□□□ -0.74
RDH11-203ENST00000553384 C1orf167Q5SNV9 1468 aa10.45□□□□□ -0.74
RDH11-203ENST00000553384 RAB3GAP2Q9H2M9 1393 aa10.45□□□□□ -0.74
RDH11-203ENST00000553384 LAMC1P11047 1609 aa10.45□□□□□ -0.74
RDH11-203ENST00000553384 DDX17Q92841 729 aaKnown RBP10.45□□□□□ -0.74
RDH11-203ENST00000553384 ZNF326Q5BKZ1 582 aaKnown RBP10.44□□□□□ -0.74
RDH11-203ENST00000553384 MPHOSPH9Q99550 1183 aa10.44□□□□□ -0.74
RDH11-203ENST00000553384 SPHKAPQ2M3C7 1700 aa10.43□□□□□ -0.74
RDH11-203ENST00000553384 ATRNO75882 1429 aa10.42□□□□□ -0.74
RDH11-203ENST00000553384 PRAG1Q86YV5 1406 aa10.41□□□□□ -0.74
RDH11-203ENST00000553384 ORAI2Q96SN7 254 aa10.41□□□□□ -0.74
RDH11-203ENST00000553384 VGFO15240 615 aaPredicted RBP10.4□□□□□ -0.74
RDH11-203ENST00000553384 NPHP3Q7Z494 1330 aa10.4□□□□□ -0.75
RDH11-203ENST00000553384 EP400Q96L91 3159 aa10.39□□□□□ -0.75
RDH11-203ENST00000553384 NALCNQ8IZF0 1738 aa10.39□□□□□ -0.75
RDH11-203ENST00000553384 GJD4Q96KN9 370 aaPredicted RBP10.39□□□□□ -0.75
RDH11-203ENST00000553384 BCL9LQ86UU0 1499 aa10.39□□□□□ -0.75
RDH11-203ENST00000553384 COL22A1Q8NFW1 1626 aaPredicted RBP10.38□□□□□ -0.75
RDH11-203ENST00000553384 CCDC144AA2RUR9 1427 aa10.38□□□□□ -0.75
RDH11-203ENST00000553384 MYOM2P54296 1465 aa10.38□□□□□ -0.75
RDH11-203ENST00000553384 NEXMIFQ5QGS0 1516 aa10.38□□□□□ -0.75
RDH11-203ENST00000553384 CLTCL1P53675 1640 aa10.37□□□□□ -0.75
RDH11-203ENST00000553384 ROBO2Q9HCK4 1378 aa10.37□□□□□ -0.75
RDH11-203ENST00000553384 KIF1BO60333 1816 aa10.37□□□□□ -0.75
RDH11-203ENST00000553384 RPGRIP1LQ68CZ1 1315 aa10.36□□□□□ -0.75
RDH11-203ENST00000553384 LRPPRCP42704 1394 aaKnown RBP10.36□□□□□ -0.75
RDH11-203ENST00000553384 BLMP54132 1417 aaPredicted RBP10.36□□□□□ -0.75
RDH11-203ENST00000553384 ESCO1Q5FWF5 840 aa10.35□□□□□ -0.75
RDH11-203ENST00000553384 UNC5CLQ8IV45 518 aa10.35□□□□□ -0.75
RDH11-203ENST00000553384 RGL3Q3MIN7 710 aa10.34□□□□□ -0.75
RDH11-203ENST00000553384 PXDNQ92626 1479 aa10.33□□□□□ -0.76
RDH11-203ENST00000553384 FOXO3O43524 673 aa10.33□□□□□ -0.76
RDH11-203ENST00000553384 CENPBP07199 599 aaPredicted RBP10.33□□□□□ -0.76
RDH11-203ENST00000553384 SF3B2Q13435 895 aaKnown RBP10.33□□□□□ -0.76
RDH11-203ENST00000553384 PELP1Q8IZL8 1130 aaKnown RBP10.32□□□□□ -0.76
RDH11-203ENST00000553384 SLIT2O94813 1529 aa10.32□□□□□ -0.76
RDH11-203ENST00000553384 CDC42BPGQ6DT37 1551 aa10.32□□□□□ -0.76
RDH11-203ENST00000553384 ONECUT3O60422 494 aaPredicted RBP10.31□□□□□ -0.76
RDH11-203ENST00000553384 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.31□□□□□ -0.76
RDH11-203ENST00000553384 MARF1Q9Y4F3 1742 aaKnown RBP10.31□□□□□ -0.76
RDH11-203ENST00000553384 MIER1Q8N108 512 aa10.31□□□□□ -0.76
RDH11-203ENST00000553384 RALGAPBQ86X10 1494 aa10.31□□□□□ -0.76
RDH11-203ENST00000553384 SPATA31A3Q5VYP0 1347 aa10.3□□□□□ -0.76
RDH11-203ENST00000553384 NEUROD1Q13562 356 aa10.3□□□□□ -0.76
RDH11-203ENST00000553384 DEFB132Q7Z7B7 95 aa10.29□□□□□ -0.76
RDH11-203ENST00000553384 VPS72Q15906 364 aa10.29□□□□□ -0.76
RDH11-203ENST00000553384 SEPT12Q8IYM1 358 aa10.29□□□□□ -0.76
RDH11-203ENST00000553384 GLI3P10071 1580 aa10.28□□□□□ -0.76
RDH11-203ENST00000553384 TECPR2O15040 1411 aa10.28□□□□□ -0.76
RDH11-203ENST00000553384 ANKRD30BQ9BXX2 1392 aa10.28□□□□□ -0.76
RDH11-203ENST00000553384 XPCQ01831 940 aaPredicted RBP10.28□□□□□ -0.76
RDH11-203ENST00000553384 LRP5O75197 1615 aa10.28□□□□□ -0.76
RDH11-203ENST00000553384 SPATA31E1Q6ZUB1 1445 aa10.27□□□□□ -0.77
RDH11-203ENST00000553384 ABCC11Q96J66 1382 aa10.27□□□□□ -0.77
RDH11-203ENST00000553384 KRT27Q7Z3Y8 459 aa10.27□□□□□ -0.77
RDH11-203ENST00000553384 SIRT1Q96EB6 747 aa10.27□□□□□ -0.77
RDH11-203ENST00000553384 BAG6P46379 1132 aa10.26□□□□□ -0.77
RDH11-203ENST00000553384 PSME1Q06323 249 aa10.26□□□□□ -0.77
RDH11-203ENST00000553384 KRT28Q7Z3Y7 464 aa10.26□□□□□ -0.77
RDH11-203ENST00000553384 PPLO60437 1756 aa10.26□□□□□ -0.77
RDH11-203ENST00000553384 TIMELESSQ9UNS1 1208 aa10.25□□□□□ -0.77
RDH11-203ENST00000553384 WAPLQ7Z5K2 1190 aa10.25□□□□□ -0.77
RDH11-203ENST00000553384 USP32Q8NFA0 1604 aa10.24□□□□□ -0.77
RDH11-203ENST00000553384 ADGRF5Q8IZF2 1346 aa10.24□□□□□ -0.77
RDH11-203ENST00000553384 HAP1P54257 671 aaPredicted RBP10.24□□□□□ -0.77
RDH11-203ENST00000553384 DCAF11Q8TEB1 546 aa10.24□□□□□ -0.77
RDH11-203ENST00000553384 SIN3AQ96ST3 1273 aa10.24□□□□□ -0.77
RDH11-203ENST00000553384 SBNO1A3KN83 1393 aa10.24□□□□□ -0.77
RDH11-203ENST00000553384 KIF1AQ12756 1690 aa10.23□□□□□ -0.77
RDH11-203ENST00000553384 NUTM2FA1L443 756 aa10.23□□□□□ -0.77
RDH11-203ENST00000553384 KDM2AQ9Y2K7 1162 aa10.23□□□□□ -0.77
RDH11-203ENST00000553384 TNS3Q68CZ2 1445 aa10.23□□□□□ -0.77
RDH11-203ENST00000553384 STK26Q9P289 416 aa10.23□□□□□ -0.77
RDH11-203ENST00000553384 CCDC9Q9Y3X0 531 aaKnown RBP10.23□□□□□ -0.77
RDH11-203ENST00000553384 BRWD3Q6RI45 1802 aa10.23□□□□□ -0.77
RDH11-203ENST00000553384 ARHGEF10O15013 1369 aa10.23□□□□□ -0.77
RDH11-203ENST00000553384 NWD2Q9ULI1 1742 aa10.22□□□□□ -0.77
RDH11-203ENST00000553384 PHF8Q9UPP1 1060 aa10.22□□□□□ -0.77
RDH11-203ENST00000553384 YTHDC1Q96MU7 727 aaKnown RBP10.21□□□□□ -0.77
RDH11-203ENST00000553384 IFT172Q9UG01 1749 aa10.21□□□□□ -0.78
RDH11-203ENST00000553384 FMN2Q9NZ56 1722 aa10.2□□□□□ -0.78
RDH11-203ENST00000553384 PLEKHH1Q9ULM0 1364 aa10.2□□□□□ -0.78
RDH11-203ENST00000553384 PSDA5PKW4 1024 aaPredicted RBP10.2□□□□□ -0.78
RDH11-203ENST00000553384 FAM83GA6ND36 823 aa10.2□□□□□ -0.78
RDH11-203ENST00000553384 CABLES1Q8TDN4 633 aa10.2□□□□□ -0.78
RDH11-203ENST00000553384 STAC3Q96MF2 364 aa10.2□□□□□ -0.78
RDH11-203ENST00000553384 PIK3C2GO75747 1445 aa10.2□□□□□ -0.78
RDH11-203ENST00000553384 TMEM132EQ6IEE7 984 aa10.19□□□□□ -0.78
RDH11-203ENST00000553384 DISP2A7MBM2 1401 aa10.19□□□□□ -0.78
RDH11-203ENST00000553384 YTHDC2Q9H6S0 1430 aaKnown RBP10.19□□□□□ -0.78
RDH11-203ENST00000553384 KNDC1Q76NI1 1749 aa10.19□□□□□ -0.78
RDH11-203ENST00000553384 NRXN1Q9ULB1 1477 aa10.19□□□□□ -0.78
RDH11-203ENST00000553384 A0A0G2JS52 829 aa10.18□□□□□ -0.78
RDH11-203ENST00000553384 MYT1Q01538 1121 aa10.18□□□□□ -0.78
RDH11-203ENST00000553384 FAM98CQ17RN3 349 aaKnown RBP10.18□□□□□ -0.78
RDH11-203ENST00000553384 CFAP70Q5T0N1 1121 aa10.18□□□□□ -0.78
RDH11-203ENST00000553384 GTF3C3Q9Y5Q9 886 aa10.18□□□□□ -0.78
RDH11-203ENST00000553384 EN1Q05925 392 aaPredicted RBP10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 348 ms