RNA–Protein interactions for RNA: ENST00000553338.1

IFT43-204, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 684 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-204ENST00000553338 ABCC11Q96J66 1382 aa28.68■■■□□ 2.18
IFT43-204ENST00000553338 NUTM2BA6NNL0 878 aaPredicted RBP28.68■■■□□ 2.18
IFT43-204ENST00000553338 NUTM2EB1AL46 878 aaPredicted RBP28.68■■■□□ 2.18
IFT43-204ENST00000553338 NUTM2AQ8IVF1 878 aaPredicted RBP28.68■■■□□ 2.18
IFT43-204ENST00000553338 YTHDC2Q9H6S0 1430 aaKnown RBP28.68■■■□□ 2.18
IFT43-204ENST00000553338 HRCP23327 699 aa28.67■■■□□ 2.18
IFT43-204ENST00000553338 LAMC1P11047 1609 aa28.66■■■□□ 2.18
IFT43-204ENST00000553338 C14orf93Q9H972 538 aaKnown RBP28.66■■■□□ 2.18
IFT43-204ENST00000553338 PLEKHH1Q9ULM0 1364 aa28.64■■■□□ 2.18
IFT43-204ENST00000553338 CFAP70Q5T0N1 1121 aa28.64■■■□□ 2.18
IFT43-204ENST00000553338 DHX57Q6P158 1386 aaKnown RBP28.62■■■□□ 2.17
IFT43-204ENST00000553338 PNPLA6Q8IY17 1366 aa28.62■■■□□ 2.17
IFT43-204ENST00000553338 ESCO1Q5FWF5 840 aa28.6■■■□□ 2.17
IFT43-204ENST00000553338 ZNF772Q68DY9 489 aaPredicted RBP28.59■■■□□ 2.17
IFT43-204ENST00000553338 NUTM2FA1L443 756 aa28.58■■■□□ 2.17
IFT43-204ENST00000553338 SOS2Q07890 1332 aaPredicted RBP28.58■■■□□ 2.17
IFT43-204ENST00000553338 SIRT1Q96EB6 747 aa28.56■■■□□ 2.16
IFT43-204ENST00000553338 KDM2AQ9Y2K7 1162 aa28.56■■■□□ 2.16
IFT43-204ENST00000553338 DCAF11Q8TEB1 546 aa28.55■■■□□ 2.16
IFT43-204ENST00000553338 NPHP3Q7Z494 1330 aa28.53■■■□□ 2.16
IFT43-204ENST00000553338 FMN2Q9NZ56 1722 aa28.53■■■□□ 2.16
IFT43-204ENST00000553338 PRAM1Q96QH2 718 aa28.51■■■□□ 2.15
IFT43-204ENST00000553338 AFF2P51816 1311 aa28.5■■■□□ 2.15
IFT43-204ENST00000553338 FOXO3O43524 673 aa28.5■■■□□ 2.15
IFT43-204ENST00000553338 SAFB2Q14151 953 aaKnown RBP eCLIP28.5■■■□□ 2.15
IFT43-204ENST00000553338 C8orf37Q96NL8 207 aa28.5■■■□□ 2.15
IFT43-204ENST00000553338 PXDNQ92626 1479 aa28.48■■■□□ 2.15
IFT43-204ENST00000553338 XPCQ01831 940 aaPredicted RBP28.48■■■□□ 2.15
IFT43-204ENST00000553338 POGKQ9P215 609 aa28.48■■■□□ 2.15
IFT43-204ENST00000553338 ADGRB1O14514 1584 aa28.48■■■□□ 2.15
IFT43-204ENST00000553338 DLC1Q96QB1 1528 aa28.48■■■□□ 2.15
IFT43-204ENST00000553338 ADAMTS2O95450 1211 aa28.47■■■□□ 2.15
IFT43-204ENST00000553338 STAC3Q96MF2 364 aa28.46■■■□□ 2.15
IFT43-204ENST00000553338 KIF1AQ12756 1690 aa28.45■■■□□ 2.14
IFT43-204ENST00000553338 TRAK1Q9UPV9 953 aa28.44■■■□□ 2.14
IFT43-204ENST00000553338 COL22A1Q8NFW1 1626 aaPredicted RBP28.43■■■□□ 2.14
IFT43-204ENST00000553338 RXRBP28702 533 aa28.43■■■□□ 2.14
IFT43-204ENST00000553338 NGLY1Q96IV0 654 aa28.41■■■□□ 2.14
IFT43-204ENST00000553338 RGPD8O14715 1765 aaPredicted RBP28.39■■■□□ 2.13
IFT43-204ENST00000553338 ADGRB2O60241 1585 aa28.37■■■□□ 2.13
IFT43-204ENST00000553338 PHF8Q9UPP1 1060 aa28.37■■■□□ 2.13
IFT43-204ENST00000553338 QTRT2Q9H974 415 aaKnown RBP28.36■■■□□ 2.13
IFT43-204ENST00000553338 KRT28Q7Z3Y7 464 aa28.35■■■□□ 2.13
IFT43-204ENST00000553338 HIRIP3Q9BW71 556 aaPredicted RBP28.35■■■□□ 2.13
IFT43-204ENST00000553338 MINK1Q8N4C8 1332 aaPredicted RBP28.35■■■□□ 2.13
IFT43-204ENST00000553338 ANKARQ7Z5J8 1434 aa28.33■■■□□ 2.13
IFT43-204ENST00000553338 CDK12Q9NYV4 1490 aaPredicted RBP28.33■■■□□ 2.13
IFT43-204ENST00000553338 SPATA31A3Q5VYP0 1347 aa28.32■■■□□ 2.12
IFT43-204ENST00000553338 USP32Q8NFA0 1604 aa28.32■■■□□ 2.12
IFT43-204ENST00000553338 USP21Q9UK80 565 aa28.31■■■□□ 2.12
IFT43-204ENST00000553338 RBM6P78332 1123 aaKnown RBP28.3■■■□□ 2.12
IFT43-204ENST00000553338 PSME1Q06323 249 aa28.3■■■□□ 2.12
IFT43-204ENST00000553338 ARHGEF28Q8N1W1 1705 aaKnown RBP28.29■■■□□ 2.12
IFT43-204ENST00000553338 EIF3AQ14152 1382 aaKnown RBP28.28■■■□□ 2.12
IFT43-204ENST00000553338 PMFBP1Q8TBY8 1022 aa28.28■■■□□ 2.12
IFT43-204ENST00000553338 TNS3Q68CZ2 1445 aa28.27■■■□□ 2.12
IFT43-204ENST00000553338 MARF1Q9Y4F3 1742 aaKnown RBP28.27■■■□□ 2.12
IFT43-204ENST00000553338 FNBP4Q8N3X1 1017 aaPredicted RBP28.27■■■□□ 2.12
IFT43-204ENST00000553338 TULP4Q9NRJ4 1543 aa28.26■■■□□ 2.11
IFT43-204ENST00000553338 WASLO00401 505 aaPredicted RBP28.25■■■□□ 2.11
IFT43-204ENST00000553338 TRPC5Q9UL62 973 aaPredicted RBP28.25■■■□□ 2.11
IFT43-204ENST00000553338 KIAA1210Q9ULL0 1709 aa28.25■■■□□ 2.11
IFT43-204ENST00000553338 RGS12O14924 1447 aa28.25■■■□□ 2.11
IFT43-204ENST00000553338 SBNO1A3KN83 1393 aa28.24■■■□□ 2.11
IFT43-204ENST00000553338 LMOD2Q6P5Q4 547 aa28.23■■■□□ 2.11
IFT43-204ENST00000553338 PRR36Q9H6K5 1346 aa28.22■■■□□ 2.11
IFT43-204ENST00000553338 HAP1P54257 671 aaPredicted RBP28.22■■■□□ 2.11
IFT43-204ENST00000553338 PLEKHG5O94827 1062 aa28.21■■■□□ 2.11
IFT43-204ENST00000553338 ATRNO75882 1429 aa28.19■■■□□ 2.1
IFT43-204ENST00000553338 UPF1Q92900 1129 aaKnown RBP eCLIP28.19■■■□□ 2.1
IFT43-204ENST00000553338 ARHGEF10O15013 1369 aa28.19■■■□□ 2.1
IFT43-204ENST00000553338 NBPF1Q3BBV0 1214 aa28.18■■■□□ 2.1
IFT43-204ENST00000553338 GPRASP1Q5JY77 1395 aa28.18■■■□□ 2.1
IFT43-204ENST00000553338 BCL9LQ86UU0 1499 aa28.18■■■□□ 2.1
IFT43-204ENST00000553338 CABLES1Q8TDN4 633 aa28.17■■■□□ 2.1
IFT43-204ENST00000553338 NGDNQ8NEJ9 315 aaKnown RBP28.15■■■□□ 2.1
IFT43-204ENST00000553338 SIN3AQ96ST3 1273 aa28.15■■■□□ 2.1
IFT43-204ENST00000553338 L3MBTL2Q969R5 705 aa28.14■■■□□ 2.1
IFT43-204ENST00000553338 ITSN1Q15811 1721 aa28.14■■■□□ 2.1
IFT43-204ENST00000553338 TRPM3Q9HCF6 1732 aaPredicted RBP28.14■■■□□ 2.1
IFT43-204ENST00000553338 ABCA3Q99758 1704 aa28.13■■■□□ 2.09
IFT43-204ENST00000553338 NUDT16Q96DE0 195 aaKnown RBP28.13■■■□□ 2.09
IFT43-204ENST00000553338 ATP7BP35670 1465 aa28.13■■■□□ 2.09
IFT43-204ENST00000553338 NEUROD1Q13562 356 aa28.12■■■□□ 2.09
IFT43-204ENST00000553338 CDK19Q9BWU1 502 aa28.12■■■□□ 2.09
IFT43-204ENST00000553338 SLIT2O94813 1529 aa28.12■■■□□ 2.09
IFT43-204ENST00000553338 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.11■■■□□ 2.09
IFT43-204ENST00000553338 UNC5CLQ8IV45 518 aa28.1■■■□□ 2.09
IFT43-204ENST00000553338 ALS2Q96Q42 1657 aa28.09■■■□□ 2.09
IFT43-204ENST00000553338 PAK3O75914 559 aaPredicted RBP28.08■■■□□ 2.09
IFT43-204ENST00000553338 GJD4Q96KN9 370 aaPredicted RBP28.08■■■□□ 2.09
IFT43-204ENST00000553338 CENPJQ9HC77 1338 aaPredicted RBP28.06■■■□□ 2.08
IFT43-204ENST00000553338 PLCH1Q4KWH8 1693 aa28.05■■■□□ 2.08
IFT43-204ENST00000553338 TOPAZ1Q8N9V7 1692 aa28.04■■■□□ 2.08
IFT43-204ENST00000553338 ATAD2Q6PL18 1390 aa28.04■■■□□ 2.08
IFT43-204ENST00000553338 RALGAPBQ86X10 1494 aa28.02■■■□□ 2.08
IFT43-204ENST00000553338 NWD2Q9ULI1 1742 aa28.02■■■□□ 2.08
IFT43-204ENST00000553338 CCDC61Q9Y6R9 512 aa28.02■■■□□ 2.08
IFT43-204ENST00000553338 TRPM1Q7Z4N2 1603 aa28.02■■■□□ 2.08
IFT43-204ENST00000553338 QRICH2Q9H0J4 1663 aa28.01■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms